RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 DPYDQ12882 1025 aa20.18■□□□□ 0.82
VRK3-225ENST00000601912 SV2BQ7L1I2 683 aa20.18■□□□□ 0.82
VRK3-225ENST00000601912 TRIML1Q8N9V2 468 aa20.18■□□□□ 0.82
VRK3-225ENST00000601912 SPATA20Q8TB22 786 aa20.18■□□□□ 0.82
VRK3-225ENST00000601912 FAM200AQ8TCP9 573 aa20.18■□□□□ 0.82
VRK3-225ENST00000601912 STAMQ92783 540 aa20.18■□□□□ 0.82
VRK3-225ENST00000601912 GSDMAQ96QA5 445 aa20.18■□□□□ 0.82
VRK3-225ENST00000601912 DNAJC25Q9H1X3 360 aa20.18■□□□□ 0.82
VRK3-225ENST00000601912 PORCNQ9H237 461 aa20.18■□□□□ 0.82
VRK3-225ENST00000601912 EIF3JO75822 258 aaKnown RBP20.17■□□□□ 0.82
VRK3-225ENST00000601912 SREBF2Q12772 1141 aa20.17■□□□□ 0.82
VRK3-225ENST00000601912 FAM110CQ1W6H9 321 aa20.17■□□□□ 0.82
VRK3-225ENST00000601912 KCTD17Q8N5Z5 321 aa20.17■□□□□ 0.82
VRK3-225ENST00000601912 LARP4BQ92615 738 aaKnown RBP20.17■□□□□ 0.82
VRK3-225ENST00000601912 MTRQ99707 1265 aa20.17■□□□□ 0.82
VRK3-225ENST00000601912 POLR3CQ9BUI4 534 aaPredicted RBP20.17■□□□□ 0.82
VRK3-225ENST00000601912 LRRC27Q9C0I9 530 aa20.17■□□□□ 0.82
VRK3-225ENST00000601912 EFCC1Q9HA90 598 aa20.17■□□□□ 0.82
VRK3-225ENST00000601912 PKD2L1Q9P0L9 805 aa20.17■□□□□ 0.82
VRK3-225ENST00000601912 TCEAL9Q9UHQ7 104 aa20.17■□□□□ 0.82
VRK3-225ENST00000601912 SOWAHBA6NEL2 793 aa20.16■□□□□ 0.82
VRK3-225ENST00000601912 CHMP2AO43633 222 aa20.16■□□□□ 0.82
VRK3-225ENST00000601912 STRNO43815 780 aa20.16■□□□□ 0.82
VRK3-225ENST00000601912 ZNF165P49910 485 aa20.16■□□□□ 0.82
VRK3-225ENST00000601912 PDE4DQ08499 809 aa20.16■□□□□ 0.82
VRK3-225ENST00000601912 CATSPER3Q86XQ3 398 aa20.16■□□□□ 0.82
VRK3-225ENST00000601912 RAD54LQ92698 747 aa20.16■□□□□ 0.82
VRK3-225ENST00000601912 EIF2AK1Q9BQI3 630 aaKnown RBP20.16■□□□□ 0.82
VRK3-225ENST00000601912 R3HDMLQ9H3Y0 253 aa20.16■□□□□ 0.82
VRK3-225ENST00000601912 MAN1B1Q9UKM7 699 aa20.16■□□□□ 0.82
VRK3-225ENST00000601912 KIAA1024Q9UPX6 916 aa20.16■□□□□ 0.82
VRK3-225ENST00000601912 IVNS1ABPQ9Y6Y0 642 aa20.16■□□□□ 0.82
VRK3-225ENST00000601912 DNAJC25-GNG10A0A024R161 153 aa20.16■□□□□ 0.82
VRK3-225ENST00000601912 FAM155AB1AL88 458 aaPredicted RBP20.16■□□□□ 0.82
VRK3-225ENST00000601912 EML1O00423 815 aa20.16■□□□□ 0.82
VRK3-225ENST00000601912 IGF2BP3O00425 579 aaKnown RBP eCLIP20.16■□□□□ 0.82
VRK3-225ENST00000601912 MED24O75448 989 aa20.16■□□□□ 0.82
VRK3-225ENST00000601912 TAF1CQ15572 869 aaPredicted RBP20.16■□□□□ 0.82
VRK3-225ENST00000601912 IFNL1Q8IU54 200 aa20.16■□□□□ 0.82
VRK3-225ENST00000601912 BLZF1Q9H2G9 400 aa20.16■□□□□ 0.82
VRK3-225ENST00000601912 UNC45AQ9H3U1 944 aa20.16■□□□□ 0.82
VRK3-225ENST00000601912 TUFT1Q9NNX1 390 aa20.16■□□□□ 0.82
VRK3-225ENST00000601912 BLOC1S4Q9NUP1 217 aa20.16■□□□□ 0.82
VRK3-225ENST00000601912 RMND1Q9NWS8 449 aa20.16■□□□□ 0.82
VRK3-225ENST00000601912 POTEB3A0JP26 581 aa20.15■□□□□ 0.82
VRK3-225ENST00000601912 DHX15O43143 795 aaKnown RBP20.15■□□□□ 0.82
VRK3-225ENST00000601912 PGK2P07205 417 aa20.15■□□□□ 0.82
VRK3-225ENST00000601912 EDNRBP24530 442 aa20.15■□□□□ 0.82
VRK3-225ENST00000601912 ITGB3BPQ13352 177 aaPredicted RBP20.15■□□□□ 0.82
VRK3-225ENST00000601912 CUL4BQ13620 913 aa20.15■□□□□ 0.82
VRK3-225ENST00000601912 EPHA7Q15375 998 aa20.15■□□□□ 0.82
VRK3-225ENST00000601912 ECM1Q16610 540 aa20.15■□□□□ 0.82
VRK3-225ENST00000601912 UVSSAQ2YD98 709 aa20.15■□□□□ 0.82
VRK3-225ENST00000601912 ISM2Q6H9L7 571 aa20.15■□□□□ 0.82
VRK3-225ENST00000601912 POTEBQ6S5H4 581 aa20.15■□□□□ 0.82
VRK3-225ENST00000601912 B3GNT9Q6UX72 402 aa20.15■□□□□ 0.82
VRK3-225ENST00000601912 PAXIP1Q6ZW49 1069 aaPredicted RBP20.15■□□□□ 0.82
VRK3-225ENST00000601912 ABRAQ8N0Z2 381 aa20.15■□□□□ 0.82
VRK3-225ENST00000601912 LRRC15Q8TF66 581 aa20.15■□□□□ 0.82
VRK3-225ENST00000601912 ASTN1O14525 1302 aa20.14■□□□□ 0.82
VRK3-225ENST00000601912 LCTP09848 1927 aa20.14■□□□□ 0.81
VRK3-225ENST00000601912 A0A087WWV3 80 aa20.14■□□□□ 0.81
VRK3-225ENST00000601912 LOC102724159A0A0B4J2E5 919 aa20.14■□□□□ 0.81
VRK3-225ENST00000601912 DDX39AO00148 427 aaKnown RBP20.14■□□□□ 0.81
VRK3-225ENST00000601912 SPATA31C1P0DKV0 1188 aa20.14■□□□□ 0.81
VRK3-225ENST00000601912 MUTP22033 750 aa20.14■□□□□ 0.81
VRK3-225ENST00000601912 CASP1P29466 404 aa20.14■□□□□ 0.81
VRK3-225ENST00000601912 DEKP35659 375 aaKnown RBP20.14■□□□□ 0.81
VRK3-225ENST00000601912 PWP2Q15269 919 aaKnown RBP20.14■□□□□ 0.81
VRK3-225ENST00000601912 DPCR1Q3MIW9 517 aa20.14■□□□□ 0.81
VRK3-225ENST00000601912 MIER3Q7Z3K6 550 aa20.14■□□□□ 0.81
VRK3-225ENST00000601912 NEK9Q8TD19 979 aa20.14■□□□□ 0.81
VRK3-225ENST00000601912 CCDC47Q96A33 483 aaKnown RBP20.14■□□□□ 0.81
VRK3-225ENST00000601912 HSD17B14Q9BPX1 270 aa20.14■□□□□ 0.81
VRK3-225ENST00000601912 DACH1Q9UI36 760 aa20.14■□□□□ 0.81
VRK3-225ENST00000601912 DNM3Q9UQ16 869 aa20.14■□□□□ 0.81
VRK3-225ENST00000601912 SPATA31C2B4DYI2 1134 aa20.13■□□□□ 0.81
VRK3-225ENST00000601912 RGS20O76081 388 aa20.13■□□□□ 0.81
VRK3-225ENST00000601912 MAPK4P31152 587 aa20.13■□□□□ 0.81
VRK3-225ENST00000601912 KRT76Q01546 638 aa20.13■□□□□ 0.81
VRK3-225ENST00000601912 SEMA3FQ13275 785 aa20.13■□□□□ 0.81
VRK3-225ENST00000601912 MORC3Q14149 939 aa20.13■□□□□ 0.81
VRK3-225ENST00000601912 DHX8Q14562 1220 aaKnown RBP20.13■□□□□ 0.81
VRK3-225ENST00000601912 MCM6Q14566 821 aa20.13■□□□□ 0.81
VRK3-225ENST00000601912 C11orf57Q6ZUT1 292 aaPredicted RBP20.13■□□□□ 0.81
VRK3-225ENST00000601912 C7orf25Q9BPX7 421 aa20.13■□□□□ 0.81
VRK3-225ENST00000601912 CBX8Q9HC52 389 aa20.13■□□□□ 0.81
VRK3-225ENST00000601912 POTEFA5A3E0 1075 aa20.13■□□□□ 0.81
VRK3-225ENST00000601912 ATP9AO75110 1047 aa20.13■□□□□ 0.81
VRK3-225ENST00000601912 RPN1P04843 607 aaKnown RBP20.13■□□□□ 0.81
VRK3-225ENST00000601912 XRCC6P12956 609 aaKnown RBP eCLIP20.13■□□□□ 0.81
VRK3-225ENST00000601912 ICAM3P32942 547 aa20.13■□□□□ 0.81
VRK3-225ENST00000601912 CYP4A11Q02928 519 aa20.13■□□□□ 0.81
VRK3-225ENST00000601912 POTEGQ6S5H5 508 aa20.13■□□□□ 0.81
VRK3-225ENST00000601912 KCNK18Q7Z418 384 aa20.13■□□□□ 0.81
VRK3-225ENST00000601912 MLKLQ8NB16 471 aa20.13■□□□□ 0.81
VRK3-225ENST00000601912 ANP32BQ92688 251 aaKnown RBP20.13■□□□□ 0.81
VRK3-225ENST00000601912 TRIM9Q9C026 710 aa20.13■□□□□ 0.81
VRK3-225ENST00000601912 BMP2KQ9NSY1 1161 aaPredicted RBP20.13■□□□□ 0.81
VRK3-225ENST00000601912 SAMM50Q9Y512 469 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms