RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 IKBKEQ14164 716 aa20.79■□□□□ 0.92
CHMP2A-208ENST00000601220 USP17L6PQ6QN14 398 aa20.79■□□□□ 0.92
CHMP2A-208ENST00000601220 METTL7BQ6UX53 244 aa20.79■□□□□ 0.92
CHMP2A-208ENST00000601220 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.79■□□□□ 0.922e-9■■■■■ 99.2
CHMP2A-208ENST00000601220 ZNF654Q8IZM8 581 aa20.79■□□□□ 0.92
CHMP2A-208ENST00000601220 NECAB3Q96P71 396 aaPredicted RBP20.79■□□□□ 0.92
CHMP2A-208ENST00000601220 GPR20Q99678 358 aa20.79■□□□□ 0.92
CHMP2A-208ENST00000601220 MTA3Q9BTC8 594 aa20.79■□□□□ 0.92
CHMP2A-208ENST00000601220 OSBPL7Q9BZF2 842 aa20.79■□□□□ 0.92
CHMP2A-208ENST00000601220 RTEL1Q9NZ71 1219 aa20.79■□□□□ 0.92
CHMP2A-208ENST00000601220 BAZ2BQ9UIF8 2168 aaKnown RBP20.78■□□□□ 0.92
CHMP2A-208ENST00000601220 C17orf102A2RUQ5 167 aa20.78■□□□□ 0.92
CHMP2A-208ENST00000601220 RSPH10B2B2RC85 870 aa20.78■□□□□ 0.92
CHMP2A-208ENST00000601220 TREHO43280 583 aa20.78■□□□□ 0.92
CHMP2A-208ENST00000601220 DDAH1O94760 285 aa20.78■□□□□ 0.92
CHMP2A-208ENST00000601220 RSPH10BP0C881 870 aa20.78■□□□□ 0.92
CHMP2A-208ENST00000601220 THPOP40225 353 aa20.78■□□□□ 0.92
CHMP2A-208ENST00000601220 KCNQ1P51787 676 aa20.78■□□□□ 0.92
CHMP2A-208ENST00000601220 ERVK-21P61565 698 aa20.78■□□□□ 0.92
CHMP2A-208ENST00000601220 IRX6P78412 446 aaPredicted RBP20.78■□□□□ 0.92
CHMP2A-208ENST00000601220 NEDD9Q14511 834 aa20.78■□□□□ 0.92
CHMP2A-208ENST00000601220 GNPTABQ3T906 1256 aa20.78■□□□□ 0.92
CHMP2A-208ENST00000601220 CYFIP1Q7L576 1253 aa20.78■□□□□ 0.92
CHMP2A-208ENST00000601220 DBF4BQ8NFT6 615 aa20.78■□□□□ 0.92
CHMP2A-208ENST00000601220 ZBED2Q9BTP6 218 aa20.78■□□□□ 0.92
CHMP2A-208ENST00000601220 USP26Q9BXU7 913 aa20.78■□□□□ 0.92
CHMP2A-208ENST00000601220 LSG1Q9H089 658 aaKnown RBP20.78■□□□□ 0.92
CHMP2A-208ENST00000601220 LINC01553A4QN01 128 aa20.77■□□□□ 0.92
CHMP2A-208ENST00000601220 FIBPO43427 364 aa20.77■□□□□ 0.92
CHMP2A-208ENST00000601220 ADAM17P78536 824 aa20.77■□□□□ 0.92
CHMP2A-208ENST00000601220 PLEKHG4Q58EX7 1191 aa20.77■□□□□ 0.92
CHMP2A-208ENST00000601220 PCNX4Q63HM2 1172 aa20.77■□□□□ 0.92
CHMP2A-208ENST00000601220 SRBD1Q8N5C6 995 aaKnown RBP20.77■□□□□ 0.92
CHMP2A-208ENST00000601220 ATP6V0A1Q93050 837 aa20.77■□□□□ 0.92
CHMP2A-208ENST00000601220 SUGCTQ9HAC7 445 aa20.77■□□□□ 0.92
CHMP2A-208ENST00000601220 LMCD1Q9NZU5 365 aa20.77■□□□□ 0.92
CHMP2A-208ENST00000601220 EMSYQ7Z589 1322 aa20.77■□□□□ 0.91
CHMP2A-208ENST00000601220 MYH7BA7E2Y1 1941 aa20.76■□□□□ 0.91
CHMP2A-208ENST00000601220 SH2B2O14492 632 aaPredicted RBP20.76■□□□□ 0.91
CHMP2A-208ENST00000601220 PRC1O43663 620 aa20.76■□□□□ 0.91
CHMP2A-208ENST00000601220 PLEKHA8P1O95397 391 aa20.76■□□□□ 0.91
CHMP2A-208ENST00000601220 SKIV2LQ15477 1246 aaKnown RBP20.76■□□□□ 0.91
CHMP2A-208ENST00000601220 XRRA1Q6P2D8 792 aa20.76■□□□□ 0.91
CHMP2A-208ENST00000601220 CTCFLQ8NI51 663 aaPredicted RBP20.76■□□□□ 0.91
CHMP2A-208ENST00000601220 RRP36Q96EU6 259 aaKnown RBP20.76■□□□□ 0.91
CHMP2A-208ENST00000601220 SENP7Q9BQF6 1050 aa20.76■□□□□ 0.91
CHMP2A-208ENST00000601220 LZTS2Q9BRK4 669 aa20.76■□□□□ 0.91
CHMP2A-208ENST00000601220 COG5Q9UP83 839 aa20.76■□□□□ 0.91
CHMP2A-208ENST00000601220 KIF5BP33176 963 aa20.75■□□□□ 0.91
CHMP2A-208ENST00000601220 HTRA4P83105 476 aaPredicted RBP20.75■□□□□ 0.91
CHMP2A-208ENST00000601220 AAK1Q2M2I8 961 aa20.75■□□□□ 0.91
CHMP2A-208ENST00000601220 TRIM50Q86XT4 487 aa20.75■□□□□ 0.91
CHMP2A-208ENST00000601220 GDPD5Q8WTR4 605 aa20.75■□□□□ 0.91
CHMP2A-208ENST00000601220 TGS1Q96RS0 853 aaKnown RBP20.75■□□□□ 0.91
CHMP2A-208ENST00000601220 SETD4Q9NVD3 440 aa20.75■□□□□ 0.91
CHMP2A-208ENST00000601220 BDP1A6H8Y1 2624 aa20.75■□□□□ 0.91
CHMP2A-208ENST00000601220 NOP56O00567 594 aaKnown RBP20.74■□□□□ 0.91
CHMP2A-208ENST00000601220 FAM117BQ6P1L5 589 aa20.74■□□□□ 0.91
CHMP2A-208ENST00000601220 CMTR1Q8N1G2 835 aaKnown RBP20.74■□□□□ 0.91
CHMP2A-208ENST00000601220 SMARCC2Q8TAQ2 1214 aa20.74■□□□□ 0.91
CHMP2A-208ENST00000601220 SP7Q8TDD2 431 aaPredicted RBP20.74■□□□□ 0.91
CHMP2A-208ENST00000601220 SLC27A2O14975 620 aa20.73■□□□□ 0.91
CHMP2A-208ENST00000601220 ATP9AO75110 1047 aa20.73■□□□□ 0.91
CHMP2A-208ENST00000601220 CAND2O75155 1236 aa20.73■□□□□ 0.91
CHMP2A-208ENST00000601220 MCM5P33992 734 aa20.73■□□□□ 0.91
CHMP2A-208ENST00000601220 LIFRP42702 1097 aa20.73■□□□□ 0.91
CHMP2A-208ENST00000601220 NECTIN1Q15223 517 aa20.73■□□□□ 0.91
CHMP2A-208ENST00000601220 CASC1Q6TDU7 716 aa20.73■□□□□ 0.91
CHMP2A-208ENST00000601220 TMTC2Q8N394 836 aa20.73■□□□□ 0.91
CHMP2A-208ENST00000601220 IL27Q8NEV9 243 aa20.73■□□□□ 0.91
CHMP2A-208ENST00000601220 HLA-CQ95604 372 aa20.73■□□□□ 0.91
CHMP2A-208ENST00000601220 TMEM87BQ96K49 555 aa20.73■□□□□ 0.91
CHMP2A-208ENST00000601220 MTUS1Q9ULD2 1270 aa20.73■□□□□ 0.91
CHMP2A-208ENST00000601220 INSL6Q9Y581 213 aa20.73■□□□□ 0.91
CHMP2A-208ENST00000601220 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.72■□□□□ 0.91
CHMP2A-208ENST00000601220 ITGB5P18084 799 aa20.72■□□□□ 0.91
CHMP2A-208ENST00000601220 RXRAP19793 462 aa20.72■□□□□ 0.91
CHMP2A-208ENST00000601220 GNAQP50148 359 aa20.72■□□□□ 0.91
CHMP2A-208ENST00000601220 FAM26DQ5JW98 314 aa20.72■□□□□ 0.91
CHMP2A-208ENST00000601220 CUL5Q93034 780 aa20.72■□□□□ 0.91
CHMP2A-208ENST00000601220 ESYT1Q9BSJ8 1104 aa20.72■□□□□ 0.91
CHMP2A-208ENST00000601220 NCOR1O75376 2440 aa20.72■□□□□ 0.91
CHMP2A-208ENST00000601220 AMHP03971 560 aa20.71■□□□□ 0.91
CHMP2A-208ENST00000601220 GNAT1P11488 350 aa20.71■□□□□ 0.91
CHMP2A-208ENST00000601220 KCNA2P16389 499 aa20.71■□□□□ 0.91
CHMP2A-208ENST00000601220 UTP14CQ5TAP6 766 aaKnown RBP20.71■□□□□ 0.91
CHMP2A-208ENST00000601220 CREB3L3Q68CJ9 461 aa20.71■□□□□ 0.91
CHMP2A-208ENST00000601220 NLRX1Q86UT6 975 aa20.71■□□□□ 0.91
CHMP2A-208ENST00000601220 LMBR1Q8WVP7 490 aa20.71■□□□□ 0.91
CHMP2A-208ENST00000601220 TOP1MTQ969P6 601 aa20.71■□□□□ 0.91
CHMP2A-208ENST00000601220 C17orf80Q9BSJ5 609 aa20.71■□□□□ 0.91
CHMP2A-208ENST00000601220 PSTPIP2Q9H939 334 aa20.71■□□□□ 0.91
CHMP2A-208ENST00000601220 SEC63Q9UGP8 760 aaKnown RBP20.71■□□□□ 0.91
CHMP2A-208ENST00000601220 GSTTP1A0A1W2PQM5 241 aa20.7■□□□□ 0.9
CHMP2A-208ENST00000601220 CCDC69A6NI79 296 aa20.7■□□□□ 0.9
CHMP2A-208ENST00000601220 CTSHP09668 335 aa20.7■□□□□ 0.9
CHMP2A-208ENST00000601220 COL9A1P20849 921 aa20.7■□□□□ 0.9
CHMP2A-208ENST00000601220 NFXL1Q6ZNB6 911 aa20.7■□□□□ 0.9
CHMP2A-208ENST00000601220 RPAINQ86UA6 219 aa20.7■□□□□ 0.9
CHMP2A-208ENST00000601220 MYOCDQ8IZQ8 938 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms