RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 GNPTABQ3T906 1256 aa25.88■■□□□ 1.73
IRF3-227ENST00000600911 CCDC62Q6P9F0 684 aa25.88■■□□□ 1.73
IRF3-227ENST00000600911 OTOP1Q7RTM1 612 aa25.88■■□□□ 1.73
IRF3-227ENST00000600911 TRPV1Q8NER1 839 aa25.88■■□□□ 1.73
IRF3-227ENST00000600911 MMTAG2Q9BU76 263 aaKnown RBP25.88■■□□□ 1.73
IRF3-227ENST00000600911 A0A1B0GVL5 298 aa25.88■■□□□ 1.73
IRF3-227ENST00000600911 MARCH6O60337 910 aa25.88■■□□□ 1.73
IRF3-227ENST00000600911 CCNE2O96020 404 aa25.88■■□□□ 1.73
IRF3-227ENST00000600911 RESP18Q5W5W9 173 aa25.88■■□□□ 1.73
IRF3-227ENST00000600911 SLFN12Q8IYM2 578 aa25.88■■□□□ 1.73
IRF3-227ENST00000600911 SYMPKQ92797 1274 aaKnown RBP25.88■■□□□ 1.73
IRF3-227ENST00000600911 DDX41Q9UJV9 622 aaKnown RBP25.88■■□□□ 1.73
IRF3-227ENST00000600911 POTEFA5A3E0 1075 aa25.87■■□□□ 1.73
IRF3-227ENST00000600911 B4DLN1 442 aa25.87■■□□□ 1.73
IRF3-227ENST00000600911 CHMP2AO43633 222 aa25.87■■□□□ 1.73
IRF3-227ENST00000600911 ZNF865P0CJ78 1059 aaPredicted RBP25.87■■□□□ 1.73
IRF3-227ENST00000600911 UBE2HP62256 183 aa25.87■■□□□ 1.73
IRF3-227ENST00000600911 ACVR2BQ13705 512 aa25.87■■□□□ 1.73
IRF3-227ENST00000600911 MSL3Q8N5Y2 521 aaKnown RBP25.87■■□□□ 1.73
IRF3-227ENST00000600911 LRRC15Q8TF66 581 aa25.87■■□□□ 1.73
IRF3-227ENST00000600911 MPHOSPH6Q99547 160 aaKnown RBP25.87■■□□□ 1.73
IRF3-227ENST00000600911 VTA1Q9NP79 307 aa25.87■■□□□ 1.73
IRF3-227ENST00000600911 ZHX1Q9UKY1 873 aaPredicted RBP25.87■■□□□ 1.73
IRF3-227ENST00000600911 RBM47A0AV96 593 aaKnown RBP25.86■■□□□ 1.73
IRF3-227ENST00000600911 GAS7O60861 476 aa25.86■■□□□ 1.73
IRF3-227ENST00000600911 HSPA8P11142 646 aaKnown RBP25.86■■□□□ 1.73
IRF3-227ENST00000600911 CSPP1Q1MSJ5 1256 aa25.86■■□□□ 1.73
IRF3-227ENST00000600911 NCAPH2Q6IBW4 605 aa25.86■■□□□ 1.73
IRF3-227ENST00000600911 LENG1Q96BZ8 264 aaPredicted RBP25.86■■□□□ 1.73
IRF3-227ENST00000600911 A0A1W2PQ27 194 aa25.85■■□□□ 1.73
IRF3-227ENST00000600911 A0A1W2PQ64 194 aa25.85■■□□□ 1.73
IRF3-227ENST00000600911 A0A1W2PQD8 194 aa25.85■■□□□ 1.73
IRF3-227ENST00000600911 LONP1P36776 959 aaKnown RBP25.85■■□□□ 1.73
IRF3-227ENST00000600911 ECM1Q16610 540 aa25.85■■□□□ 1.73
IRF3-227ENST00000600911 FSIP1Q8NA03 581 aa25.85■■□□□ 1.73
IRF3-227ENST00000600911 ZNF579Q8NAF0 562 aaKnown RBP25.85■■□□□ 1.73
IRF3-227ENST00000600911 RIT2Q99578 217 aa25.85■■□□□ 1.73
IRF3-227ENST00000600911 TEKT3Q9BXF9 490 aa25.85■■□□□ 1.73
IRF3-227ENST00000600911 ABHD16BQ9H3Z7 469 aa25.85■■□□□ 1.73
IRF3-227ENST00000600911 TRIM17Q9Y577 477 aa25.85■■□□□ 1.73
IRF3-227ENST00000600911 GOLGA6L22H0YM25 854 aa25.85■■□□□ 1.73
IRF3-227ENST00000600911 MAFGO15525 162 aa25.85■■□□□ 1.73
IRF3-227ENST00000600911 PFKFB1P16118 471 aa25.85■■□□□ 1.73
IRF3-227ENST00000600911 CMA1P23946 247 aa25.85■■□□□ 1.73
IRF3-227ENST00000600911 NDUFA8P51970 172 aa25.85■■□□□ 1.73
IRF3-227ENST00000600911 PPP2R5CQ13362 524 aa25.85■■□□□ 1.73
IRF3-227ENST00000600911 IRF5Q13568 498 aa25.85■■□□□ 1.73
IRF3-227ENST00000600911 CYFIP1Q7L576 1253 aa25.85■■□□□ 1.73
IRF3-227ENST00000600911 HPSEQ9Y251 543 aa25.85■■□□□ 1.73
IRF3-227ENST00000600911 BRCA2P51587 3418 aa25.84■■□□□ 1.73
IRF3-227ENST00000600911 DDX11L8A8MPP1 907 aa25.84■■□□□ 1.73
IRF3-227ENST00000600911 SMPD1P17405 629 aa25.84■■□□□ 1.73
IRF3-227ENST00000600911 SP4Q02446 784 aa25.84■■□□□ 1.73
IRF3-227ENST00000600911 CCDC144BQ3MJ40 725 aa25.84■■□□□ 1.73
IRF3-227ENST00000600911 PANK2Q9BZ23 570 aa25.84■■□□□ 1.73
IRF3-227ENST00000600911 LRWD1Q9UFC0 647 aa25.84■■□□□ 1.73
IRF3-227ENST00000600911 PTCH2Q9Y6C5 1203 aa25.84■■□□□ 1.73
IRF3-227ENST00000600911 NFASCO94856 1347 aa25.84■■□□□ 1.73
IRF3-227ENST00000600911 FARP2O94887 1054 aaPredicted RBP25.83■■□□□ 1.73
IRF3-227ENST00000600911 HSPA1AP0DMV8 641 aaKnown RBP25.83■■□□□ 1.73
IRF3-227ENST00000600911 HSPA1BP0DMV9 641 aaKnown RBP25.83■■□□□ 1.73
IRF3-227ENST00000600911 TXNP10599 105 aaKnown RBP25.83■■□□□ 1.73
IRF3-227ENST00000600911 TMEM266Q2M3C6 531 aa25.83■■□□□ 1.73
IRF3-227ENST00000600911 MRPS27Q92552 414 aaKnown RBP25.83■■□□□ 1.73
IRF3-227ENST00000600911 CDHR1Q96JP9 859 aa25.83■■□□□ 1.73
IRF3-227ENST00000600911 FAM237AA0A1B0GTK4 181 aa25.82■■□□□ 1.72
IRF3-227ENST00000600911 ADCY3O60266 1144 aa25.82■■□□□ 1.72
IRF3-227ENST00000600911 GGPS1O95749 300 aa25.82■■□□□ 1.72
IRF3-227ENST00000600911 HOXD10P28358 340 aa25.82■■□□□ 1.72
IRF3-227ENST00000600911 IRX5P78411 483 aaPredicted RBP25.82■■□□□ 1.72
IRF3-227ENST00000600911 CACNB2Q08289 660 aaPredicted RBP25.82■■□□□ 1.72
IRF3-227ENST00000600911 SNW1Q13573 536 aaKnown RBP25.82■■□□□ 1.72
IRF3-227ENST00000600911 PDIA5Q14554 519 aa25.82■■□□□ 1.72
IRF3-227ENST00000600911 KARSQ15046 597 aaKnown RBP25.82■■□□□ 1.72
IRF3-227ENST00000600911 ENGASEQ8NFI3 743 aa25.82■■□□□ 1.72
IRF3-227ENST00000600911 SCFD2Q8WU76 684 aa25.82■■□□□ 1.72
IRF3-227ENST00000600911 PLIN2Q99541 437 aa25.82■■□□□ 1.72
IRF3-227ENST00000600911 SENP7Q9BQF6 1050 aa25.82■■□□□ 1.72
IRF3-227ENST00000600911 TBC1D22BQ9NU19 505 aa25.82■■□□□ 1.72
IRF3-227ENST00000600911 MED24O75448 989 aa25.81■■□□□ 1.72
IRF3-227ENST00000600911 NR1I2O75469 434 aa25.81■■□□□ 1.72
IRF3-227ENST00000600911 CYBAP13498 195 aa25.81■■□□□ 1.72
IRF3-227ENST00000600911 PNMA5Q96PV4 448 aa25.81■■□□□ 1.72
IRF3-227ENST00000600911 RGL1Q9NZL6 768 aa25.81■■□□□ 1.72
IRF3-227ENST00000600911 WRAP73Q9P2S5 460 aaPredicted RBP25.81■■□□□ 1.72
IRF3-227ENST00000600911 A0A087WWV3 80 aa25.81■■□□□ 1.72
IRF3-227ENST00000600911 GOLGA6L4A6NEF3 574 aa25.81■■□□□ 1.72
IRF3-227ENST00000600911 GNRH1P01148 92 aa25.81■■□□□ 1.72
IRF3-227ENST00000600911 TTLL4Q14679 1199 aa25.81■■□□□ 1.72
IRF3-227ENST00000600911 PDILTQ8N807 584 aa25.81■■□□□ 1.72
IRF3-227ENST00000600911 RAET1EQ8TD07 263 aa25.81■■□□□ 1.72
IRF3-227ENST00000600911 JPH1Q9HDC5 661 aaPredicted RBP25.81■■□□□ 1.72
IRF3-227ENST00000600911 SLC9A2Q9UBY0 812 aa25.81■■□□□ 1.72
IRF3-227ENST00000600911 SPATA31C1P0DKV0 1188 aa25.8■■□□□ 1.72
IRF3-227ENST00000600911 TGFB3P10600 412 aa25.8■■□□□ 1.72
IRF3-227ENST00000600911 ARHGAP1Q07960 439 aa25.8■■□□□ 1.72
IRF3-227ENST00000600911 GRB10Q13322 594 aa25.8■■□□□ 1.72
IRF3-227ENST00000600911 CELF3Q5SZQ8 465 aaKnown RBP25.8■■□□□ 1.72
IRF3-227ENST00000600911 CABP7Q86V35 215 aa25.8■■□□□ 1.72
IRF3-227ENST00000600911 FMR1NBQ8N0W7 255 aaPredicted RBP25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms