RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 XRRA1Q6P2D8 792 aa13.3□□□□□ -0.28
SOX2-OT-233ENST00000600778 METTL7BQ6UX53 244 aa13.3□□□□□ -0.28
SOX2-OT-233ENST00000600778 LRRC8DQ7L1W4 858 aa13.3□□□□□ -0.28
SOX2-OT-233ENST00000600778 PRDM12Q9H4Q4 367 aa13.3□□□□□ -0.28
SOX2-OT-233ENST00000600778 TUT1Q9H6E5 874 aaKnown RBP13.3□□□□□ -0.28
SOX2-OT-233ENST00000600778 SLC28A3Q9HAS3 691 aa13.3□□□□□ -0.28
SOX2-OT-233ENST00000600778 PCDHA6Q9UN73 950 aa13.3□□□□□ -0.28
SOX2-OT-233ENST00000600778 PCDHA8Q9Y5H6 950 aa13.3□□□□□ -0.28
SOX2-OT-233ENST00000600778 CNTNAP5Q8WYK1 1306 aa13.3□□□□□ -0.28
SOX2-OT-233ENST00000600778 SPDYE3A6NKU9 549 aa13.29□□□□□ -0.28
SOX2-OT-233ENST00000600778 GOLGA8AA7E2F4 631 aa13.29□□□□□ -0.28
SOX2-OT-233ENST00000600778 GOLGA8BA8MQT2 603 aa13.29□□□□□ -0.28
SOX2-OT-233ENST00000600778 HMGB1P09429 215 aaKnown RBP13.29□□□□□ -0.28
SOX2-OT-233ENST00000600778 FGD1P98174 961 aa13.29□□□□□ -0.28
SOX2-OT-233ENST00000600778 SP4Q02446 784 aa13.29□□□□□ -0.28
SOX2-OT-233ENST00000600778 GPNMBQ14956 572 aa13.29□□□□□ -0.28
SOX2-OT-233ENST00000600778 UTP14CQ5TAP6 766 aaKnown RBP13.29□□□□□ -0.28
SOX2-OT-233ENST00000600778 WWC2Q6AWC2 1192 aa13.29□□□□□ -0.28
SOX2-OT-233ENST00000600778 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.29□□□□□ -0.28
SOX2-OT-233ENST00000600778 WNT8BQ93098 351 aa13.29□□□□□ -0.28
SOX2-OT-233ENST00000600778 GAS2L1Q99501 681 aaPredicted RBP13.29□□□□□ -0.28
SOX2-OT-233ENST00000600778 GPR20Q99678 358 aa13.29□□□□□ -0.28
SOX2-OT-233ENST00000600778 SENP7Q9BQF6 1050 aa13.29□□□□□ -0.28
SOX2-OT-233ENST00000600778 USP26Q9BXU7 913 aa13.29□□□□□ -0.28
SOX2-OT-233ENST00000600778 TELO2Q9Y4R8 837 aa13.29□□□□□ -0.28
SOX2-OT-233ENST00000600778 V9GY48 417 aaPredicted RBP13.29□□□□□ -0.28
SOX2-OT-233ENST00000600778 TANC1Q9C0D5 1861 aa13.29□□□□□ -0.28
SOX2-OT-233ENST00000600778 TRIP12Q14669 1992 aaPredicted RBP13.29□□□□□ -0.28
SOX2-OT-233ENST00000600778 CHD7Q9P2D1 2997 aa13.29□□□□□ -0.28
SOX2-OT-233ENST00000600778 GBF1Q92538 1859 aa13.28□□□□□ -0.28
SOX2-OT-233ENST00000600778 C17orf102A2RUQ5 167 aa13.28□□□□□ -0.28
SOX2-OT-233ENST00000600778 RBAK-RBAKDNI3L0D1 243 aa13.28□□□□□ -0.28
SOX2-OT-233ENST00000600778 ATP9AO75110 1047 aa13.28□□□□□ -0.28
SOX2-OT-233ENST00000600778 SMIM10L2AP0DMW4 78 aa13.28□□□□□ -0.28
SOX2-OT-233ENST00000600778 SMIM10L2BP0DMW5 78 aa13.28□□□□□ -0.28
SOX2-OT-233ENST00000600778 CDC27P30260 824 aa13.28□□□□□ -0.28
SOX2-OT-233ENST00000600778 ADD1P35611 737 aaKnown RBP13.28□□□□□ -0.28
SOX2-OT-233ENST00000600778 NAPAP54920 295 aa13.28□□□□□ -0.28
SOX2-OT-233ENST00000600778 RBL2Q08999 1139 aa13.28□□□□□ -0.28
SOX2-OT-233ENST00000600778 APOBRQ0VD83 1088 aa13.28□□□□□ -0.28
SOX2-OT-233ENST00000600778 FUT2Q10981 343 aa13.28□□□□□ -0.28
SOX2-OT-233ENST00000600778 TRIM71Q2Q1W2 868 aaKnown RBP13.28□□□□□ -0.28
SOX2-OT-233ENST00000600778 ZNF618Q5T7W0 954 aa13.28□□□□□ -0.28
SOX2-OT-233ENST00000600778 PPP2R2DQ66LE6 453 aa13.28□□□□□ -0.28
SOX2-OT-233ENST00000600778 Q6ZUG5 572 aa13.28□□□□□ -0.28
SOX2-OT-233ENST00000600778 ATP6V0A1Q93050 837 aa13.28□□□□□ -0.28
SOX2-OT-233ENST00000600778 GPRASP2Q96D09 838 aa13.28□□□□□ -0.28
SOX2-OT-233ENST00000600778 JAKMIP1Q96N16 626 aaKnown RBP13.28□□□□□ -0.28
SOX2-OT-233ENST00000600778 RNPEPQ9H4A4 650 aa13.28□□□□□ -0.28
SOX2-OT-233ENST00000600778 FAM217BQ9NTX9 383 aaPredicted RBP13.28□□□□□ -0.28
SOX2-OT-233ENST00000600778 PCDHA11Q9Y5I1 949 aa13.28□□□□□ -0.28
SOX2-OT-233ENST00000600778 SNX14Q9Y5W7 946 aa13.28□□□□□ -0.28
SOX2-OT-233ENST00000600778 DOCK5Q9H7D0 1870 aa13.27□□□□□ -0.28
SOX2-OT-233ENST00000600778 NBNO60934 754 aa13.27□□□□□ -0.29
SOX2-OT-233ENST00000600778 BAIAP3O94812 1187 aa13.27□□□□□ -0.29
SOX2-OT-233ENST00000600778 PARNO95453 639 aaKnown RBP13.27□□□□□ -0.29
SOX2-OT-233ENST00000600778 KCNA2P16389 499 aa13.27□□□□□ -0.29
SOX2-OT-233ENST00000600778 ITGB5P18084 799 aa13.27□□□□□ -0.29
SOX2-OT-233ENST00000600778 HSPA4P34932 840 aa13.27□□□□□ -0.29
SOX2-OT-233ENST00000600778 TYW1BQ6NUM6 668 aa13.27□□□□□ -0.29
SOX2-OT-233ENST00000600778 BLOC1S2Q6QNY1 142 aa13.27□□□□□ -0.29
SOX2-OT-233ENST00000600778 TRIM50Q86XT4 487 aa13.27□□□□□ -0.29
SOX2-OT-233ENST00000600778 GIMAP8Q8ND71 665 aaPredicted RBP13.27□□□□□ -0.29
SOX2-OT-233ENST00000600778 PHOSPHO2Q8TCD6 241 aa13.27□□□□□ -0.29
SOX2-OT-233ENST00000600778 PPM1EQ8WY54 764 aa13.27□□□□□ -0.29
SOX2-OT-233ENST00000600778 KCNB2Q92953 911 aa13.27□□□□□ -0.29
SOX2-OT-233ENST00000600778 CDHR1Q96JP9 859 aa13.27□□□□□ -0.29
SOX2-OT-233ENST00000600778 PGBD1Q96JS3 809 aa13.27□□□□□ -0.29
SOX2-OT-233ENST00000600778 SLC9A7Q96T83 725 aa13.27□□□□□ -0.29
SOX2-OT-233ENST00000600778 EHMT1Q9H9B1 1298 aa13.27□□□□□ -0.29
SOX2-OT-233ENST00000600778 PKD2L1Q9P0L9 805 aa13.27□□□□□ -0.29
SOX2-OT-233ENST00000600778 UBIAD1Q9Y5Z9 338 aa13.27□□□□□ -0.29
SOX2-OT-233ENST00000600778 SMCO2A6NFE2 343 aa13.26□□□□□ -0.29
SOX2-OT-233ENST00000600778 STXBP3O00186 592 aa13.26□□□□□ -0.29
SOX2-OT-233ENST00000600778 TREHO43280 583 aa13.26□□□□□ -0.29
SOX2-OT-233ENST00000600778 REC8O95072 547 aa13.26□□□□□ -0.29
SOX2-OT-233ENST00000600778 CXCL10P02778 98 aa13.26□□□□□ -0.29
SOX2-OT-233ENST00000600778 CA3P07451 260 aa13.26□□□□□ -0.29
SOX2-OT-233ENST00000600778 IGFBP4P22692 258 aa13.26□□□□□ -0.29
SOX2-OT-233ENST00000600778 TCF7P36402 384 aaPredicted RBP13.26□□□□□ -0.29
SOX2-OT-233ENST00000600778 THPOP40225 353 aa13.26□□□□□ -0.29
SOX2-OT-233ENST00000600778 KCNJ6P48051 423 aa13.26□□□□□ -0.29
SOX2-OT-233ENST00000600778 METAP2P50579 478 aaKnown RBP eCLIP13.26□□□□□ -0.29
SOX2-OT-233ENST00000600778 MTMR1Q13613 665 aa13.26□□□□□ -0.29
SOX2-OT-233ENST00000600778 TCTN1Q2MV58 587 aa13.26□□□□□ -0.29
SOX2-OT-233ENST00000600778 CNKSR3Q6P9H4 555 aa13.26□□□□□ -0.29
SOX2-OT-233ENST00000600778 SERINC5Q86VE9 423 aa13.26□□□□□ -0.29
SOX2-OT-233ENST00000600778 HERC6Q8IVU3 1022 aa13.26□□□□□ -0.29
SOX2-OT-233ENST00000600778 BRF1Q92994 677 aa13.26□□□□□ -0.29
SOX2-OT-233ENST00000600778 RIC8AQ9NPQ8 531 aa13.26□□□□□ -0.29
SOX2-OT-233ENST00000600778 JADE2Q9NQC1 790 aa13.26□□□□□ -0.29
SOX2-OT-233ENST00000600778 SETD4Q9NVD3 440 aa13.26□□□□□ -0.29
SOX2-OT-233ENST00000600778 ZNF215Q9UL58 517 aaPredicted RBP13.26□□□□□ -0.29
SOX2-OT-233ENST00000600778 TET1Q8NFU7 2136 aa13.25□□□□□ -0.29
SOX2-OT-233ENST00000600778 RSPH10B2B2RC85 870 aa13.25□□□□□ -0.29
SOX2-OT-233ENST00000600778 KIF28PB7ZC32 967 aa13.25□□□□□ -0.29
SOX2-OT-233ENST00000600778 RSPH10BP0C881 870 aa13.25□□□□□ -0.29
SOX2-OT-233ENST00000600778 GNAT1P11488 350 aa13.25□□□□□ -0.29
SOX2-OT-233ENST00000600778 RPS6KB1P23443 525 aa13.25□□□□□ -0.29
SOX2-OT-233ENST00000600778 HOXC8P31273 242 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms