RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 MCTP2Q6DN12 878 aa11.8□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 CHST3Q7LGC8 479 aa11.8□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 DGKHQ86XP1 1220 aa11.8□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 RGS22Q8NE09 1264 aa11.8□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 IL31RAQ8NI17 732 aa11.8□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 GDPD5Q8WTR4 605 aa11.8□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 GPKOWQ92917 476 aaPredicted RBP eCLIP11.8□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 SLC9A7Q96T83 725 aa11.8□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 OSBPL7Q9BZF2 842 aa11.8□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 BCAS3Q9H6U6 928 aa11.8□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 TAF6LQ9Y6J9 622 aa11.8□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 HAS3O00219 553 aa11.79□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 SORBS3O60504 671 aa11.79□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 PCP11498 1178 aaKnown RBP11.79□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 EIF2AK2P19525 551 aaKnown RBP11.79□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 RFC2P35250 354 aa11.79□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 PTPN11Q06124 597 aaPredicted RBP11.79□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 RBL2Q08999 1139 aa11.79□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 MKRN4PQ13434 485 aaPredicted RBP11.79□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 SEC23AQ15436 765 aa11.79□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 CWC27Q6UX04 472 aaKnown RBP11.79□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 CYB5R4Q7L1T6 521 aa11.79□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 SESTD1Q86VW0 696 aa11.79□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 ESR2Q92731 530 aa11.79□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 ZFP91Q96JP5 570 aaPredicted RBP11.79□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 OSBPL3Q9H4L5 887 aa11.79□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 SENP2Q9HC62 589 aa11.79□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 GPHNQ9NQX3 736 aaPredicted RBP11.79□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 ZSWIM5Q9P217 1185 aa11.79□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 HDAC6Q9UBN7 1215 aa11.79□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 DDX41Q9UJV9 622 aaKnown RBP11.79□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 FAM50BQ9Y247 325 aa11.79□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 ABCB11O95342 1321 aa11.79□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 SOBPA7XYQ1 873 aa11.78□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 ZNF213O14771 459 aa11.78□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 F2P00734 622 aa11.78□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 GH1P01241 217 aa11.78□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 CXCL10P02778 98 aa11.78□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 NUBP1P53384 320 aa11.78□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 SP2Q02086 613 aa11.78□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 GHRHRQ02643 423 aa11.78□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 LRRC8DQ7L1W4 858 aa11.78□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 CHD1LQ86WJ1 897 aa11.78□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 TICAM2Q86XR7 235 aa11.78□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 KIAA2013Q8IYS2 634 aa11.78□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 MTMR8Q96EF0 704 aa11.78□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 ZSCAN10Q96SZ4 725 aaPredicted RBP11.78□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 RMDN3Q96TC7 470 aa11.78□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 FTOQ9C0B1 505 aaKnown RBP eCLIP11.78□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 VAT1LQ9HCJ6 419 aa11.78□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 PXMP2Q9NR77 195 aa11.78□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 GTF2IRD1Q9UHL9 959 aa11.78□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 TELO2Q9Y4R8 837 aa11.78□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 DSPP15924 2871 aaKnown RBP11.78□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 RAD50Q92878 1312 aa11.78□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 KPNA6O60684 536 aa11.77□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 ZIC2O95409 532 aaPredicted RBP11.77□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 NR3C2P08235 984 aa11.77□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 CKBP12277 381 aa11.77□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 HOXD8P13378 290 aaPredicted RBP11.77□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 PSEN2P49810 448 aa11.77□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 HSD17B4P51659 736 aa11.77□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 NUCB1Q02818 461 aa11.77□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 BFSP2Q13515 415 aa11.77□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 ASPRV1Q53RT3 343 aa11.77□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 FBXO11Q86XK2 927 aa11.77□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 PHOSPHO2Q8TCD6 241 aa11.77□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 NSUN6Q8TEA1 469 aaKnown RBP11.77□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 AFAP1L1Q8TED9 768 aa11.77□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 CHAMP1Q96JM3 812 aa11.77□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 PDCD2LQ9BRP1 358 aa11.77□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 ALG1Q9BT22 464 aa11.77□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 RNF41Q9H4P4 317 aaPredicted RBP11.77□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 KAT14Q9H8E8 782 aa11.77□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 MAD2L2Q9UI95 211 aa11.77□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 KIAA1671Q9BY89 1806 aa11.76□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 SMG1Q96Q15 3661 aaKnown RBP11.76□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 RALGAPA2Q2PPJ7 1873 aa11.76□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 LOXHD1Q8IVV2 1947 aa11.76□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 CYTH3O43739 400 aa11.76□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 BAIAP3O94812 1187 aa11.76□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 CFBP00751 764 aa11.76□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 ACTN1P12814 892 aa11.76□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 GSPT1P15170 499 aaKnown RBP11.76□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 SELPP16109 830 aa11.76□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 PDE4AP27815 886 aa11.76□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 HOXA13P31271 388 aaPredicted RBP11.76□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 ZXDAP98168 799 aa11.76□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 COL9A3Q14050 684 aaPredicted RBP11.76□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 STXBP2Q15833 593 aa11.76□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 HSDL1Q3SXM5 330 aa11.76□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 ZNF618Q5T7W0 954 aa11.76□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.76□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 RETREG2Q8NC44 543 aa11.76□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 CAGE1Q8TC20 777 aa11.76□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 EMID1Q96A84 441 aaPredicted RBP11.76□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 POP1Q99575 1024 aaKnown RBP11.76□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 DSCC1Q9BVC3 393 aa11.76□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 PNMA2Q9UL42 364 aa11.76□□□□□ -0.53
MIA-RAB4B-201ENST00000600729 NOD1Q9Y239 953 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms