RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 HOXD11P31277 338 aaPredicted RBP10.73□□□□□ -0.69
NFKB1-212ENST00000600343 CCDC6Q16204 474 aa10.73□□□□□ -0.69
NFKB1-212ENST00000600343 AACSQ86V21 672 aa10.73□□□□□ -0.69
NFKB1-212ENST00000600343 NELFBQ8WX92 580 aa10.73□□□□□ -0.69
NFKB1-212ENST00000600343 PNMA2Q9UL42 364 aa10.73□□□□□ -0.69
NFKB1-212ENST00000600343 ZNF148Q9UQR1 794 aa10.73□□□□□ -0.69
NFKB1-212ENST00000600343 USP15Q9Y4E8 981 aaPredicted RBP10.73□□□□□ -0.69
NFKB1-212ENST00000600343 SPO11Q9Y5K1 396 aa10.73□□□□□ -0.69
NFKB1-212ENST00000600343 SNX3O60493 162 aa10.73□□□□□ -0.69
NFKB1-212ENST00000600343 SUN1O94901 812 aa10.73□□□□□ -0.69
NFKB1-212ENST00000600343 NFKBIAP25963 317 aa10.73□□□□□ -0.69
NFKB1-212ENST00000600343 SERPINB3P29508 390 aa10.73□□□□□ -0.69
NFKB1-212ENST00000600343 VHLP40337 213 aa10.73□□□□□ -0.69
NFKB1-212ENST00000600343 PDE6CP51160 858 aa10.73□□□□□ -0.69
NFKB1-212ENST00000600343 NEK2P51955 445 aa10.73□□□□□ -0.69
NFKB1-212ENST00000600343 COPB1P53618 953 aaKnown RBP10.73□□□□□ -0.69
NFKB1-212ENST00000600343 CYP27A1Q02318 531 aa10.73□□□□□ -0.69
NFKB1-212ENST00000600343 RNASELQ05823 741 aaKnown RBP10.73□□□□□ -0.69
NFKB1-212ENST00000600343 TBC1D9BQ66K14 1250 aa10.73□□□□□ -0.69
NFKB1-212ENST00000600343 ZMAT2Q96NC0 199 aaKnown RBP10.73□□□□□ -0.69
NFKB1-212ENST00000600343 POLR2DO15514 142 aaKnown RBP10.73□□□□□ -0.69
NFKB1-212ENST00000600343 SART1O43290 800 aaKnown RBP10.73□□□□□ -0.69
NFKB1-212ENST00000600343 UBTFL6P0CB48 400 aaPredicted RBP10.73□□□□□ -0.69
NFKB1-212ENST00000600343 RASSF7Q02833 373 aa10.73□□□□□ -0.69
NFKB1-212ENST00000600343 UBXN1Q04323 297 aa10.73□□□□□ -0.69
NFKB1-212ENST00000600343 TTF1Q15361 905 aaPredicted RBP10.73□□□□□ -0.69
NFKB1-212ENST00000600343 PDCD7Q8N8D1 485 aaKnown RBP10.73□□□□□ -0.69
NFKB1-212ENST00000600343 ENDOVQ8N8Q3 282 aaKnown RBP10.73□□□□□ -0.69
NFKB1-212ENST00000600343 SUPT20HQ8NEM7 779 aa10.73□□□□□ -0.69
NFKB1-212ENST00000600343 MS4A14Q96JA4 679 aa10.73□□□□□ -0.69
NFKB1-212ENST00000600343 DYTNA2CJ06 578 aa10.72□□□□□ -0.69
NFKB1-212ENST00000600343 BOLA2-SMG1P6H3BVE0 249 aa10.72□□□□□ -0.69
NFKB1-212ENST00000600343 HGSO14964 777 aaPredicted RBP10.72□□□□□ -0.69
NFKB1-212ENST00000600343 MOCS3O95396 460 aa10.72□□□□□ -0.69
NFKB1-212ENST00000600343 STIP1P31948 543 aaKnown RBP10.72□□□□□ -0.69
NFKB1-212ENST00000600343 IL13P35225 146 aa10.72□□□□□ -0.69
NFKB1-212ENST00000600343 GPSM2P81274 684 aa10.72□□□□□ -0.69
NFKB1-212ENST00000600343 MTMR3Q13615 1198 aa10.72□□□□□ -0.69
NFKB1-212ENST00000600343 LIN52Q52LA3 116 aa10.72□□□□□ -0.69
NFKB1-212ENST00000600343 DAAM2Q86T65 1068 aa10.72□□□□□ -0.69
NFKB1-212ENST00000600343 SPATA24Q86W54 205 aa10.72□□□□□ -0.69
NFKB1-212ENST00000600343 STOML1Q9UBI4 398 aa10.72□□□□□ -0.69
NFKB1-212ENST00000600343 NCK2O43639 380 aa10.72□□□□□ -0.69
NFKB1-212ENST00000600343 RCN1Q15293 331 aa10.72□□□□□ -0.69
NFKB1-212ENST00000600343 RC3H1Q5TC82 1133 aaKnown RBP10.72□□□□□ -0.69
NFKB1-212ENST00000600343 LTV1Q96GA3 475 aaPredicted RBP10.72□□□□□ -0.69
NFKB1-212ENST00000600343 MPP4Q96JB8 637 aa10.72□□□□□ -0.69
NFKB1-212ENST00000600343 SRPK1Q96SB4 655 aaKnown RBP10.72□□□□□ -0.69
NFKB1-212ENST00000600343 PRMT1Q99873 361 aaKnown RBP10.72□□□□□ -0.69
NFKB1-212ENST00000600343 MLXIPQ9HAP2 919 aa10.72□□□□□ -0.69
NFKB1-212ENST00000600343 INTS9Q9NV88 658 aaKnown RBP10.72□□□□□ -0.69
NFKB1-212ENST00000600343 LRWD1Q9UFC0 647 aa10.72□□□□□ -0.69
NFKB1-212ENST00000600343 ZCCHC18P0CG32 403 aa10.72□□□□□ -0.69
NFKB1-212ENST00000600343 KPNB1Q14974 876 aaKnown RBP10.72□□□□□ -0.69
NFKB1-212ENST00000600343 PTPAQ15257 358 aa10.72□□□□□ -0.69
NFKB1-212ENST00000600343 WASHC4Q2M389 1173 aa10.72□□□□□ -0.69
NFKB1-212ENST00000600343 SYDE2Q5VT97 1194 aa10.72□□□□□ -0.69
NFKB1-212ENST00000600343 WDR59Q6PJI9 974 aa10.72□□□□□ -0.69
NFKB1-212ENST00000600343 FAM47EQ6ZV65 393 aa10.72□□□□□ -0.69
NFKB1-212ENST00000600343 ATXN2LQ8WWM7 1075 aaKnown RBP10.72□□□□□ -0.69
NFKB1-212ENST00000600343 GATA6Q92908 595 aa10.72□□□□□ -0.69
NFKB1-212ENST00000600343 ZNF274Q96GC6 653 aaPredicted RBP10.72□□□□□ -0.69
NFKB1-212ENST00000600343 DNAJC7Q99615 494 aa10.72□□□□□ -0.69
NFKB1-212ENST00000600343 DDX50Q9BQ39 737 aaKnown RBP10.72□□□□□ -0.69
NFKB1-212ENST00000600343 BOLA2Q9H3K6 86 aa10.72□□□□□ -0.69
NFKB1-212ENST00000600343 FBXL5Q9UKA1 691 aa10.72□□□□□ -0.69
NFKB1-212ENST00000600343 TULP4Q9NRJ4 1543 aa10.72□□□□□ -0.69
NFKB1-212ENST00000600343 ANKRD26Q9UPS8 1709 aa10.71□□□□□ -0.69
NFKB1-212ENST00000600343 GOLGA8AA7E2F4 631 aa10.71□□□□□ -0.69
NFKB1-212ENST00000600343 POTEJP0CG39 1038 aa10.71□□□□□ -0.69
NFKB1-212ENST00000600343 CD44P16070 742 aaKnown RBP10.71□□□□□ -0.69
NFKB1-212ENST00000600343 IFNAR2P48551 515 aa10.71□□□□□ -0.69
NFKB1-212ENST00000600343 SPA17Q15506 151 aa10.71□□□□□ -0.69
NFKB1-212ENST00000600343 DIXDC1Q155Q3 683 aa10.71□□□□□ -0.69
NFKB1-212ENST00000600343 CYP4X1Q8N118 509 aa10.71□□□□□ -0.69
NFKB1-212ENST00000600343 LRRC8CQ8TDW0 803 aa10.71□□□□□ -0.69
NFKB1-212ENST00000600343 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.71□□□□□ -0.69
NFKB1-212ENST00000600343 UTP4Q969X6 686 aaKnown RBP10.71□□□□□ -0.69
NFKB1-212ENST00000600343 OLFM3Q96PB7 478 aa10.71□□□□□ -0.69
NFKB1-212ENST00000600343 OSBPL10Q9BXB5 764 aa10.71□□□□□ -0.69
NFKB1-212ENST00000600343 SMIM23A6NLE4 172 aa10.71□□□□□ -0.69
NFKB1-212ENST00000600343 COBLO75128 1261 aa10.71□□□□□ -0.69
NFKB1-212ENST00000600343 HOXA10P31260 410 aaPredicted RBP10.71□□□□□ -0.69
NFKB1-212ENST00000600343 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.71□□□□□ -0.69
NFKB1-212ENST00000600343 PHLDB3Q6NSJ2 640 aa10.71□□□□□ -0.69
NFKB1-212ENST00000600343 STOX1Q6ZVD7 989 aa10.71□□□□□ -0.69
NFKB1-212ENST00000600343 PROSER2Q86WR7 435 aaPredicted RBP10.71□□□□□ -0.69
NFKB1-212ENST00000600343 NECTIN2Q92692 538 aa10.71□□□□□ -0.69
NFKB1-212ENST00000600343 SNX27Q96L92 541 aa10.71□□□□□ -0.69
NFKB1-212ENST00000600343 THAP9Q9H5L6 903 aa10.71□□□□□ -0.69
NFKB1-212ENST00000600343 NHEJ1Q9H9Q4 299 aaPredicted RBP10.71□□□□□ -0.69
NFKB1-212ENST00000600343 DDX21Q9NR30 783 aaKnown RBP eCLIP10.71□□□□□ -0.69
NFKB1-212ENST00000600343 LIMA1Q9UHB6 759 aaKnown RBP10.71□□□□□ -0.69
NFKB1-212ENST00000600343 PCDH11XQ9BZA7 1347 aa10.71□□□□□ -0.7
NFKB1-212ENST00000600343 RTP1P59025 263 aa10.71□□□□□ -0.7
NFKB1-212ENST00000600343 SH3D19Q5HYK7 790 aa10.71□□□□□ -0.7
NFKB1-212ENST00000600343 MTFR1LQ9H019 292 aa10.71□□□□□ -0.7
NFKB1-212ENST00000600343 RXFP1Q9HBX9 757 aa10.71□□□□□ -0.7
NFKB1-212ENST00000600343 FAM114A2Q9NRY5 505 aa10.71□□□□□ -0.7
NFKB1-212ENST00000600343 RGL2O15211 777 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms