RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	CYP3A7	P24462	503 aa		24.87	■■□□□ 1.57
LTBP4-227	ENST00000600026	LRRC41	Q15345	812 aa		24.87	■■□□□ 1.57
LTBP4-227	ENST00000600026	MBOAT7	Q96N66	472 aa		24.87	■■□□□ 1.57
LTBP4-227	ENST00000600026	SPC25	Q9HBM1	224 aa		24.87	■■□□□ 1.57
LTBP4-227	ENST00000600026	AGO4	Q9HCK5	861 aa	Known RBP	24.87	■■□□□ 1.57
LTBP4-227	ENST00000600026	CFAP45	Q9UL16	551 aa		24.87	■■□□□ 1.57
LTBP4-227	ENST00000600026	CTAGE5	O15320	804 aa		24.86	■■□□□ 1.57
LTBP4-227	ENST00000600026	SORBS3	O60504	671 aa		24.86	■■□□□ 1.57
LTBP4-227	ENST00000600026	MYCN	P04198	464 aa	Predicted RBP	24.86	■■□□□ 1.57
LTBP4-227	ENST00000600026	GCFC2	P16383	781 aa	Known RBP	24.86	■■□□□ 1.57
LTBP4-227	ENST00000600026	TOB1	P50616	345 aa	Predicted RBP	24.86	■■□□□ 1.57
LTBP4-227	ENST00000600026	NKX3-2	P78367	333 aa		24.86	■■□□□ 1.57
LTBP4-227	ENST00000600026		Q4G0T1	1027 aa		24.86	■■□□□ 1.57
LTBP4-227	ENST00000600026	CELF3	Q5SZQ8	465 aa	Known RBP	24.86	■■□□□ 1.57
LTBP4-227	ENST00000600026	ARRDC4	Q8NCT1	418 aa		24.86	■■□□□ 1.57
LTBP4-227	ENST00000600026	KLHDC9	Q8NEP7	349 aa		24.86	■■□□□ 1.57
LTBP4-227	ENST00000600026	SENP7	Q9BQF6	1050 aa		24.86	■■□□□ 1.57
LTBP4-227	ENST00000600026	CCNT1	O60563	726 aa	Known RBP	24.85	■■□□□ 1.57
LTBP4-227	ENST00000600026	CAPN2	P17655	700 aa		24.85	■■□□□ 1.57
LTBP4-227	ENST00000600026	NCL	P19338	710 aa	Known RBP	24.85	■■□□□ 1.57
LTBP4-227	ENST00000600026	CST5	P28325	142 aa	Predicted RBP	24.85	■■□□□ 1.57
LTBP4-227	ENST00000600026	KRT85	P78386	507 aa		24.85	■■□□□ 1.57
LTBP4-227	ENST00000600026	BEX3	Q00994	111 aa		24.85	■■□□□ 1.57
LTBP4-227	ENST00000600026	DNM1	Q05193	864 aa	Known RBP	24.85	■■□□□ 1.57
LTBP4-227	ENST00000600026	ORC2	Q13416	577 aa	Predicted RBP	24.85	■■□□□ 1.57
LTBP4-227	ENST00000600026	NEDD9	Q14511	834 aa		24.85	■■□□□ 1.57
LTBP4-227	ENST00000600026	RNF180	Q86T96	592 aa		24.85	■■□□□ 1.57
LTBP4-227	ENST00000600026	DHX37	Q8IY37	1157 aa	Known RBP	24.85	■■□□□ 1.57
LTBP4-227	ENST00000600026	ANKLE1	Q8NAG6	615 aa		24.85	■■□□□ 1.57
LTBP4-227	ENST00000600026	EMID1	Q96A84	441 aa	Predicted RBP	24.85	■■□□□ 1.57
LTBP4-227	ENST00000600026	BCAS3	Q9H6U6	928 aa		24.85	■■□□□ 1.57
LTBP4-227	ENST00000600026	CEP131	Q9UPN4	1083 aa		24.85	■■□□□ 1.57
LTBP4-227	ENST00000600026	WNT7A	O00755	349 aa		24.84	■■□□□ 1.57
LTBP4-227	ENST00000600026	SLC37A4	O43826	429 aa		24.84	■■□□□ 1.57
LTBP4-227	ENST00000600026	MNX1	P50219	401 aa	Predicted RBP	24.84	■■□□□ 1.57
LTBP4-227	ENST00000600026	FSCN1	Q16658	493 aa	Known RBP	24.84	■■□□□ 1.57
LTBP4-227	ENST00000600026	PPP4R3A	Q6IN85	833 aa		24.84	■■□□□ 1.57
LTBP4-227	ENST00000600026	MLXIP	Q9HAP2	919 aa		24.84	■■□□□ 1.57
LTBP4-227	ENST00000600026	DDX25	Q9UHL0	483 aa	Known RBP	24.84	■■□□□ 1.57
LTBP4-227	ENST00000600026	DNM1L	O00429	736 aa		24.83	■■□□□ 1.57
LTBP4-227	ENST00000600026	FARP2	O94887	1054 aa	Predicted RBP	24.83	■■□□□ 1.57
LTBP4-227	ENST00000600026	BMP15	O95972	392 aa		24.83	■■□□□ 1.57
LTBP4-227	ENST00000600026	ITGB3BP	Q13352	177 aa	Predicted RBP	24.83	■■□□□ 1.57
LTBP4-227	ENST00000600026	LAMC2	Q13753	1193 aa		24.83	■■□□□ 1.57
LTBP4-227	ENST00000600026	ZNF174	Q15697	407 aa		24.83	■■□□□ 1.57
LTBP4-227	ENST00000600026	METTL7B	Q6UX53	244 aa		24.83	■■□□□ 1.57
LTBP4-227	ENST00000600026	CYFIP1	Q7L576	1253 aa		24.83	■■□□□ 1.57
LTBP4-227	ENST00000600026	GIMAP8	Q8ND71	665 aa	Predicted RBP	24.83	■■□□□ 1.57
LTBP4-227	ENST00000600026	AFG1L	Q8WV93	481 aa		24.83	■■□□□ 1.57
LTBP4-227	ENST00000600026	UIMC1	Q96RL1	719 aa		24.83	■■□□□ 1.57
LTBP4-227	ENST00000600026	USP28	Q96RU2	1077 aa		24.83	■■□□□ 1.57
LTBP4-227	ENST00000600026	ZNF577	Q9BSK1	485 aa		24.83	■■□□□ 1.57
LTBP4-227	ENST00000600026	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	24.83	■■□□□ 1.57
LTBP4-227	ENST00000600026	TFIP11	Q9UBB9	837 aa	Known RBP	24.83	■■□□□ 1.57
LTBP4-227	ENST00000600026	PCDHB6	Q9Y5E3	794 aa		24.83	■■□□□ 1.57
LTBP4-227	ENST00000600026	NFASC	O94856	1347 aa		24.83	■■□□□ 1.56
LTBP4-227	ENST00000600026	KBTBD13	C9JR72	458 aa		24.82	■■□□□ 1.56
LTBP4-227	ENST00000600026	MSH4	O15457	936 aa		24.82	■■□□□ 1.56
LTBP4-227	ENST00000600026	MMP3	P08254	477 aa		24.82	■■□□□ 1.56
LTBP4-227	ENST00000600026	MCM7	P33993	719 aa		24.82	■■□□□ 1.56
LTBP4-227	ENST00000600026	CPT1A	P50416	773 aa		24.82	■■□□□ 1.56
LTBP4-227	ENST00000600026	CEBPZ	Q03701	1054 aa	Known RBP	24.82	■■□□□ 1.56
LTBP4-227	ENST00000600026	NBR1	Q14596	966 aa		24.82	■■□□□ 1.56
LTBP4-227	ENST00000600026	SF3A1	Q15459	793 aa	Known RBP	24.82	■■□□□ 1.56
LTBP4-227	ENST00000600026	GNAS	Q5JWF2	1037 aa		24.82	■■□□□ 1.56
LTBP4-227	ENST00000600026	CCSAP	Q6IQ19	270 aa	Predicted RBP	24.82	■■□□□ 1.56
LTBP4-227	ENST00000600026	DIS3L	Q8TF46	1054 aa	Known RBP	24.82	■■□□□ 1.56
LTBP4-227	ENST00000600026	POLR3E	Q9NVU0	708 aa		24.82	■■□□□ 1.56
LTBP4-227	ENST00000600026		A6NJR5	290 aa		24.81	■■□□□ 1.56
LTBP4-227	ENST00000600026	IPO5	O00410	1097 aa	Known RBP	24.81	■■□□□ 1.56
LTBP4-227	ENST00000600026	STK38	Q15208	465 aa		24.81	■■□□□ 1.56
LTBP4-227	ENST00000600026	HSDL1	Q3SXM5	330 aa		24.81	■■□□□ 1.56
LTBP4-227	ENST00000600026	POTED	Q86YR6	584 aa		24.81	■■□□□ 1.56
LTBP4-227	ENST00000600026	PPTC7	Q8NI37	304 aa		24.81	■■□□□ 1.56
LTBP4-227	ENST00000600026	SPATA33	Q96N06	139 aa		24.81	■■□□□ 1.56
LTBP4-227	ENST00000600026	GBP4	Q96PP9	640 aa		24.81	■■□□□ 1.56
LTBP4-227	ENST00000600026	SDF4	Q9BRK5	362 aa		24.81	■■□□□ 1.56
LTBP4-227	ENST00000600026	SCAND2P	Q9GZW5	306 aa	Predicted RBP	24.81	■■□□□ 1.56
LTBP4-227	ENST00000600026	TELO2	Q9Y4R8	837 aa		24.81	■■□□□ 1.56
LTBP4-227	ENST00000600026	CLIC4	Q9Y696	253 aa		24.81	■■□□□ 1.56
LTBP4-227	ENST00000600026	NASP	P49321	788 aa	Predicted RBP	24.8	■■□□□ 1.56
LTBP4-227	ENST00000600026	SP4	Q02446	784 aa		24.8	■■□□□ 1.56
LTBP4-227	ENST00000600026	KCNA10	Q16322	511 aa		24.8	■■□□□ 1.56
LTBP4-227	ENST00000600026	BRDT	Q58F21	947 aa	Predicted RBP	24.8	■■□□□ 1.56
LTBP4-227	ENST00000600026	PCSK9	Q8NBP7	692 aa	Known RBP	24.8	■■□□□ 1.56
LTBP4-227	ENST00000600026	ETNPPL	Q8TBG4	499 aa		24.8	■■□□□ 1.56
LTBP4-227	ENST00000600026	TSEN34	Q9BSV6	310 aa	Known RBP	24.8	■■□□□ 1.56
LTBP4-227	ENST00000600026	JPH1	Q9HDC5	661 aa	Predicted RBP	24.8	■■□□□ 1.56
LTBP4-227	ENST00000600026	DDX39A	O00148	427 aa	Known RBP	24.79	■■□□□ 1.56
LTBP4-227	ENST00000600026	NEMF	O60524	1076 aa		24.79	■■□□□ 1.56
LTBP4-227	ENST00000600026	BAG4	O95429	457 aa	Known RBP	24.79	■■□□□ 1.56
LTBP4-227	ENST00000600026	YEATS4	O95619	227 aa		24.79	■■□□□ 1.56
LTBP4-227	ENST00000600026	ASGR1	P07306	291 aa		24.79	■■□□□ 1.56
LTBP4-227	ENST00000600026	SLC5A5	Q92911	643 aa		24.79	■■□□□ 1.56
LTBP4-227	ENST00000600026	GJA10	Q969M2	543 aa		24.79	■■□□□ 1.56
LTBP4-227	ENST00000600026	FTO	Q9C0B1	505 aa	Known RBP eCLIP	24.79	■■□□□ 1.56
LTBP4-227	ENST00000600026	KCNMB3	Q9NPA1	279 aa		24.79	■■□□□ 1.56
LTBP4-227	ENST00000600026	PHF24	Q9UPV7	400 aa		24.79	■■□□□ 1.56
LTBP4-227	ENST00000600026	MOXD2P	A6NHM9	499 aa		24.78	■■□□□ 1.56
LTBP4-227	ENST00000600026	NOP56	O00567	594 aa	Known RBP	24.78	■■□□□ 1.56

Retrieved 100 of 20,778 RNA–protein pairs in 55 ms