RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 GSTT1P30711 240 aa12.23□□□□□ -0.45
SMG9-207ENST00000598860 TM4SF4P48230 202 aa12.23□□□□□ -0.45
SMG9-207ENST00000598860 TDO2P48775 406 aa12.23□□□□□ -0.45
SMG9-207ENST00000598860 INHBEP58166 350 aa12.23□□□□□ -0.45
SMG9-207ENST00000598860 SREBF2Q12772 1141 aa12.23□□□□□ -0.45
SMG9-207ENST00000598860 DCAF15Q66K64 600 aa12.23□□□□□ -0.45
SMG9-207ENST00000598860 HS2ST1Q7LGA3 356 aa12.23□□□□□ -0.45
SMG9-207ENST00000598860 PLD4Q96BZ4 506 aa12.23□□□□□ -0.45
SMG9-207ENST00000598860 WNK4Q96J92 1243 aa12.23□□□□□ -0.45
SMG9-207ENST00000598860 USP26Q9BXU7 913 aa12.23□□□□□ -0.45
SMG9-207ENST00000598860 DCP1AQ9NPI6 582 aaPredicted RBP12.23□□□□□ -0.45
SMG9-207ENST00000598860 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.23□□□□□ -0.45
SMG9-207ENST00000598860 FLT1P17948 1338 aa12.22□□□□□ -0.45
SMG9-207ENST00000598860 MANSC4A6NHS7 340 aaPredicted RBP12.22□□□□□ -0.45
SMG9-207ENST00000598860 WDHD1O75717 1129 aaPredicted RBP12.22□□□□□ -0.45
SMG9-207ENST00000598860 ZBTB48P10074 688 aaPredicted RBP12.22□□□□□ -0.45
SMG9-207ENST00000598860 HSPA4P34932 840 aa12.22□□□□□ -0.45
SMG9-207ENST00000598860 PTH1RQ03431 593 aa12.22□□□□□ -0.45
SMG9-207ENST00000598860 NFIAQ12857 509 aa12.22□□□□□ -0.45
SMG9-207ENST00000598860 IMMTQ16891 758 aaKnown RBP12.22□□□□□ -0.45
SMG9-207ENST00000598860 SBK1Q52WX2 424 aa12.22□□□□□ -0.45
SMG9-207ENST00000598860 VPS53Q5VIR6 699 aa12.22□□□□□ -0.45
SMG9-207ENST00000598860 TGFBRAP1Q8WUH2 860 aa12.22□□□□□ -0.45
SMG9-207ENST00000598860 SDR42E1Q8WUS8 393 aa12.22□□□□□ -0.45
SMG9-207ENST00000598860 DRC1Q96MC2 740 aa12.22□□□□□ -0.45
SMG9-207ENST00000598860 TINF2Q9BSI4 451 aa12.22□□□□□ -0.45
SMG9-207ENST00000598860 ACBD3Q9H3P7 528 aa12.22□□□□□ -0.45
SMG9-207ENST00000598860 EPB41L4AQ9HCS5 686 aaPredicted RBP12.22□□□□□ -0.45
SMG9-207ENST00000598860 PRDM6Q9NQX0 595 aa12.22□□□□□ -0.45
SMG9-207ENST00000598860 RBM8AQ9Y5S9 174 aaKnown RBP12.22□□□□□ -0.45
SMG9-207ENST00000598860 CSADQ9Y600 493 aa12.22□□□□□ -0.45
SMG9-207ENST00000598860 CASP8AP2Q9UKL3 1982 aa12.21□□□□□ -0.45
SMG9-207ENST00000598860 ATRNL1Q5VV63 1379 aa12.21□□□□□ -0.45
SMG9-207ENST00000598860 ATAD5Q96QE3 1844 aa12.21□□□□□ -0.45
SMG9-207ENST00000598860 GNB5O14775 395 aa12.21□□□□□ -0.45
SMG9-207ENST00000598860 FOXP2O15409 715 aa12.21□□□□□ -0.45
SMG9-207ENST00000598860 PRKAB2O43741 272 aa12.21□□□□□ -0.45
SMG9-207ENST00000598860 FGAP02671 866 aa12.21□□□□□ -0.45
SMG9-207ENST00000598860 PCP11498 1178 aaKnown RBP12.21□□□□□ -0.45
SMG9-207ENST00000598860 ZKSCAN1P17029 563 aaPredicted RBP12.21□□□□□ -0.45
SMG9-207ENST00000598860 NT5C2P49902 561 aa12.21□□□□□ -0.45
SMG9-207ENST00000598860 ANAPC15P60006 121 aa12.21□□□□□ -0.45
SMG9-207ENST00000598860 ZNF394Q53GI3 561 aa12.21□□□□□ -0.45
SMG9-207ENST00000598860 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.21□□□□□ -0.45
SMG9-207ENST00000598860 MIGA2Q7L4E1 593 aa12.21□□□□□ -0.45
SMG9-207ENST00000598860 TTC6Q86TZ1 520 aa12.21□□□□□ -0.45
SMG9-207ENST00000598860 C3orf58Q8NDZ4 430 aa12.21□□□□□ -0.45
SMG9-207ENST00000598860 OSBPL5Q9H0X9 879 aaPredicted RBP12.21□□□□□ -0.45
SMG9-207ENST00000598860 DHX36Q9H2U1 1008 aaKnown RBP12.21□□□□□ -0.45
SMG9-207ENST00000598860 MCM9Q9NXL9 1143 aa12.21□□□□□ -0.45
SMG9-207ENST00000598860 GGT7Q9UJ14 662 aa12.21□□□□□ -0.45
SMG9-207ENST00000598860 PCDHGB7Q9Y5F8 929 aa12.21□□□□□ -0.45
SMG9-207ENST00000598860 ROBO3Q96MS0 1386 aa12.2□□□□□ -0.46
SMG9-207ENST00000598860 RNF225M0QZC1 329 aaPredicted RBP12.2□□□□□ -0.46
SMG9-207ENST00000598860 ZNF213O14771 459 aa12.2□□□□□ -0.46
SMG9-207ENST00000598860 HLA-DOAP06340 250 aa12.2□□□□□ -0.46
SMG9-207ENST00000598860 SLC3A2P08195 630 aaKnown RBP12.2□□□□□ -0.46
SMG9-207ENST00000598860 ACPPP15309 386 aa12.2□□□□□ -0.46
SMG9-207ENST00000598860 AFF1P51825 1210 aaKnown RBP12.2□□□□□ -0.46
SMG9-207ENST00000598860 ATP11AP98196 1134 aa12.2□□□□□ -0.46
SMG9-207ENST00000598860 COL9A3Q14050 684 aaPredicted RBP12.2□□□□□ -0.46
SMG9-207ENST00000598860 KRT32Q14532 448 aa12.2□□□□□ -0.46
SMG9-207ENST00000598860 NECTIN1Q15223 517 aa12.2□□□□□ -0.46
SMG9-207ENST00000598860 MAPKAPK5Q8IW41 473 aa12.2□□□□□ -0.46
SMG9-207ENST00000598860 ZFPM1Q8IX07 1006 aa12.2□□□□□ -0.46
SMG9-207ENST00000598860 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.2□□□□□ -0.46
SMG9-207ENST00000598860 OPTNQ96CV9 577 aa12.2□□□□□ -0.46
SMG9-207ENST00000598860 TRIM11Q96F44 468 aa12.2□□□□□ -0.46
SMG9-207ENST00000598860 WRNIP1Q96S55 665 aa12.2□□□□□ -0.46
SMG9-207ENST00000598860 ZKSCAN3Q9BRR0 538 aa12.2□□□□□ -0.46
SMG9-207ENST00000598860 ZNF341Q9BYN7 854 aa12.2□□□□□ -0.46
SMG9-207ENST00000598860 C22orf23Q9BZE7 217 aa12.2□□□□□ -0.46
SMG9-207ENST00000598860 LIN7BQ9HAP6 207 aa12.2□□□□□ -0.46
SMG9-207ENST00000598860 ABCB6Q9NP58 842 aa12.2□□□□□ -0.46
SMG9-207ENST00000598860 DDX41Q9UJV9 622 aaKnown RBP12.2□□□□□ -0.46
SMG9-207ENST00000598860 PIK3R2O00459 728 aa12.19□□□□□ -0.46
SMG9-207ENST00000598860 TBC1D8O95759 1140 aa12.19□□□□□ -0.46
SMG9-207ENST00000598860 NID1P14543 1247 aa12.19□□□□□ -0.46
SMG9-207ENST00000598860 FCGRTP55899 365 aa12.19□□□□□ -0.46
SMG9-207ENST00000598860 PICALMQ13492 652 aa12.19□□□□□ -0.46
SMG9-207ENST00000598860 VGLL4Q14135 290 aa12.19□□□□□ -0.46
SMG9-207ENST00000598860 SF3A1Q15459 793 aaKnown RBP12.19□□□□□ -0.46
SMG9-207ENST00000598860 CREB3L3Q68CJ9 461 aa12.19□□□□□ -0.46
SMG9-207ENST00000598860 OTUD7BQ6GQQ9 843 aa12.19□□□□□ -0.46
SMG9-207ENST00000598860 CEP120Q8N960 986 aa12.19□□□□□ -0.46
SMG9-207ENST00000598860 TTC9Q92623 222 aa12.19□□□□□ -0.46
SMG9-207ENST00000598860 KCNB2Q92953 911 aa12.19□□□□□ -0.46
SMG9-207ENST00000598860 TBC1D32Q96NH3 1257 aa12.19□□□□□ -0.46
SMG9-207ENST00000598860 TCF12Q99081 682 aa12.19□□□□□ -0.46
SMG9-207ENST00000598860 OSMRQ99650 979 aa12.19□□□□□ -0.46
SMG9-207ENST00000598860 RASSF4Q9H2L5 321 aa12.19□□□□□ -0.46
SMG9-207ENST00000598860 RNF41Q9H4P4 317 aaPredicted RBP12.19□□□□□ -0.46
SMG9-207ENST00000598860 ZNF287Q9HBT7 754 aa12.19□□□□□ -0.46
SMG9-207ENST00000598860 CAPN10Q9HC96 672 aa12.19□□□□□ -0.46
SMG9-207ENST00000598860 ANAPC4Q9UJX5 808 aa12.19□□□□□ -0.46
SMG9-207ENST00000598860 MYH4Q9Y623 1939 aa12.19□□□□□ -0.46
SMG9-207ENST00000598860 GREB1LQ9C091 1923 aaPredicted RBP12.18□□□□□ -0.46
SMG9-207ENST00000598860 SLC27A2O14975 620 aa12.18□□□□□ -0.46
SMG9-207ENST00000598860 CYP21A2P08686 494 aa12.18□□□□□ -0.46
SMG9-207ENST00000598860 RACK1P63244 317 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms