RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 ADD1P35611 737 aaKnown RBP15.8■□□□□ 0.12
SCAF1-203ENST00000598359 BFSP2Q13515 415 aa15.8■□□□□ 0.12
SCAF1-203ENST00000598359 TRIM50Q86XT4 487 aa15.8■□□□□ 0.12
SCAF1-203ENST00000598359 BRF1Q92994 677 aa15.8■□□□□ 0.12
SCAF1-203ENST00000598359 KATNAL1Q9BW62 490 aa15.8■□□□□ 0.12
SCAF1-203ENST00000598359 FTOQ9C0B1 505 aaKnown RBP eCLIP15.8■□□□□ 0.12
SCAF1-203ENST00000598359 PKD2L1Q9P0L9 805 aa15.8■□□□□ 0.12
SCAF1-203ENST00000598359 PCDHA6Q9UN73 950 aa15.8■□□□□ 0.12
SCAF1-203ENST00000598359 YBX2Q9Y2T7 364 aaKnown RBP15.8■□□□□ 0.12
SCAF1-203ENST00000598359 PCDHA8Q9Y5H6 950 aa15.8■□□□□ 0.12
SCAF1-203ENST00000598359 NOP56O00567 594 aaKnown RBP15.79■□□□□ 0.12
SCAF1-203ENST00000598359 ATP9AO75110 1047 aa15.79■□□□□ 0.12
SCAF1-203ENST00000598359 PPFIA3O75145 1194 aa15.79■□□□□ 0.12
SCAF1-203ENST00000598359 STAM2O75886 525 aa15.79■□□□□ 0.12
SCAF1-203ENST00000598359 LGALS2P05162 132 aa15.79■□□□□ 0.12
SCAF1-203ENST00000598359 HMGB1P09429 215 aaKnown RBP15.79■□□□□ 0.12
SCAF1-203ENST00000598359 MYOGP15173 224 aa15.79■□□□□ 0.12
SCAF1-203ENST00000598359 ITGB5P18084 799 aa15.79■□□□□ 0.12
SCAF1-203ENST00000598359 NAPAP54920 295 aa15.79■□□□□ 0.12
SCAF1-203ENST00000598359 UTP14CQ5TAP6 766 aaKnown RBP15.79■□□□□ 0.12
SCAF1-203ENST00000598359 BLOC1S2Q6QNY1 142 aa15.79■□□□□ 0.12
SCAF1-203ENST00000598359 GPR20Q99678 358 aa15.79■□□□□ 0.12
SCAF1-203ENST00000598359 MTIF3Q9H2K0 278 aaKnown RBP15.79■□□□□ 0.12
SCAF1-203ENST00000598359 NKX2-4Q9H2Z4 354 aa15.79■□□□□ 0.12
SCAF1-203ENST00000598359 ZNF576Q9H609 170 aa15.79■□□□□ 0.12
SCAF1-203ENST00000598359 SLC4A7Q9Y6M7 1214 aa15.79■□□□□ 0.12
SCAF1-203ENST00000598359 TANC1Q9C0D5 1861 aa15.79■□□□□ 0.12
SCAF1-203ENST00000598359 CHD9Q3L8U1 2897 aa15.79■□□□□ 0.12
SCAF1-203ENST00000598359 SPDYE3A6NKU9 549 aa15.78■□□□□ 0.12
SCAF1-203ENST00000598359 STXBP3O00186 592 aa15.78■□□□□ 0.12
SCAF1-203ENST00000598359 CKBP12277 381 aa15.78■□□□□ 0.12
SCAF1-203ENST00000598359 RPS6KB1P23443 525 aa15.78■□□□□ 0.12
SCAF1-203ENST00000598359 PLA2G5P39877 138 aa15.78■□□□□ 0.12
SCAF1-203ENST00000598359 METAP2P50579 478 aaKnown RBP eCLIP15.78■□□□□ 0.124e-6■■□□□ 13.2
SCAF1-203ENST00000598359 NEDD9Q14511 834 aa15.78■□□□□ 0.12
SCAF1-203ENST00000598359 GPNMBQ14956 572 aa15.78■□□□□ 0.12
SCAF1-203ENST00000598359 TJAP1Q5JTD0 557 aa15.78■□□□□ 0.12
SCAF1-203ENST00000598359 XRRA1Q6P2D8 792 aa15.78■□□□□ 0.12
SCAF1-203ENST00000598359 METTL7BQ6UX53 244 aa15.78■□□□□ 0.12
SCAF1-203ENST00000598359 NLRX1Q86UT6 975 aa15.78■□□□□ 0.12
SCAF1-203ENST00000598359 TMEM260Q9NX78 707 aa15.78■□□□□ 0.12
SCAF1-203ENST00000598359 TMEM265A0A087WTH1 108 aa15.77■□□□□ 0.12
SCAF1-203ENST00000598359 H3BRB1 525 aa15.77■□□□□ 0.12
SCAF1-203ENST00000598359 ADAMTS3O15072 1205 aa15.77■□□□□ 0.12
SCAF1-203ENST00000598359 REC8O95072 547 aa15.77■□□□□ 0.12
SCAF1-203ENST00000598359 SMIM10L2AP0DMW4 78 aa15.77■□□□□ 0.12
SCAF1-203ENST00000598359 SMIM10L2BP0DMW5 78 aa15.77■□□□□ 0.12
SCAF1-203ENST00000598359 SELPP16109 830 aa15.77■□□□□ 0.12
SCAF1-203ENST00000598359 RFC2P35250 354 aa15.77■□□□□ 0.12
SCAF1-203ENST00000598359 TCTN1Q2MV58 587 aa15.77■□□□□ 0.12
SCAF1-203ENST00000598359 TRIM71Q2Q1W2 868 aaKnown RBP15.77■□□□□ 0.12
SCAF1-203ENST00000598359 LRRC8DQ7L1W4 858 aa15.77■□□□□ 0.12
SCAF1-203ENST00000598359 CCDC155Q8N6L0 562 aa15.77■□□□□ 0.12
SCAF1-203ENST00000598359 CAGE1Q8TC20 777 aa15.77■□□□□ 0.12
SCAF1-203ENST00000598359 AFAP1L1Q8TED9 768 aa15.77■□□□□ 0.12
SCAF1-203ENST00000598359 TUT1Q9H6E5 874 aaKnown RBP15.77■□□□□ 0.12
SCAF1-203ENST00000598359 RIC8AQ9NPQ8 531 aa15.77■□□□□ 0.12
SCAF1-203ENST00000598359 MSRAQ9UJ68 235 aa15.77■□□□□ 0.12
SCAF1-203ENST00000598359 UBIAD1Q9Y5Z9 338 aa15.77■□□□□ 0.12
SCAF1-203ENST00000598359 GBF1Q92538 1859 aa15.76■□□□□ 0.11
SCAF1-203ENST00000598359 SMCO2A6NFE2 343 aa15.76■□□□□ 0.11
SCAF1-203ENST00000598359 NBNO60934 754 aa15.76■□□□□ 0.11
SCAF1-203ENST00000598359 PFKMP08237 780 aa15.76■□□□□ 0.11
SCAF1-203ENST00000598359 KCNA2P16389 499 aa15.76■□□□□ 0.11
SCAF1-203ENST00000598359 ATP2A2P16615 1042 aaKnown RBP15.76■□□□□ 0.11
SCAF1-203ENST00000598359 ADCY7P51828 1080 aa15.76■□□□□ 0.11
SCAF1-203ENST00000598359 PTK7Q13308 1070 aa15.76■□□□□ 0.11
SCAF1-203ENST00000598359 ZNF618Q5T7W0 954 aa15.76■□□□□ 0.11
SCAF1-203ENST00000598359 CYP2W1Q8TAV3 490 aa15.76■□□□□ 0.11
SCAF1-203ENST00000598359 GPRASP2Q96D09 838 aa15.76■□□□□ 0.11
SCAF1-203ENST00000598359 FAM122AQ96E09 287 aa15.76■□□□□ 0.11
SCAF1-203ENST00000598359 PRDM12Q9H4Q4 367 aa15.76■□□□□ 0.11
SCAF1-203ENST00000598359 BARHL2Q9NY43 387 aa15.76■□□□□ 0.11
SCAF1-203ENST00000598359 TRIP12Q14669 1992 aaPredicted RBP15.76■□□□□ 0.11
SCAF1-203ENST00000598359 C17orf102A2RUQ5 167 aa15.75■□□□□ 0.11
SCAF1-203ENST00000598359 TREHO43280 583 aa15.75■□□□□ 0.11
SCAF1-203ENST00000598359 ACTN1P12814 892 aa15.75■□□□□ 0.11
SCAF1-203ENST00000598359 MTMR1Q13613 665 aa15.75■□□□□ 0.11
SCAF1-203ENST00000598359 MBTPS1Q14703 1052 aa15.75■□□□□ 0.11
SCAF1-203ENST00000598359 RAB30Q15771 203 aa15.75■□□□□ 0.11
SCAF1-203ENST00000598359 PPP1R18Q6NYC8 613 aa15.75■□□□□ 0.11
SCAF1-203ENST00000598359 TRAF7Q6Q0C0 670 aa15.75■□□□□ 0.11
SCAF1-203ENST00000598359 TMCO2Q7Z6W1 182 aaPredicted RBP15.75■□□□□ 0.11
SCAF1-203ENST00000598359 ATP6V0A1Q93050 837 aa15.75■□□□□ 0.11
SCAF1-203ENST00000598359 PHKBQ93100 1093 aa15.75■□□□□ 0.11
SCAF1-203ENST00000598359 SENP7Q9BQF6 1050 aa15.75■□□□□ 0.11
SCAF1-203ENST00000598359 LARP6Q9BRS8 491 aaKnown RBP15.75■□□□□ 0.11
SCAF1-203ENST00000598359 USP26Q9BXU7 913 aa15.75■□□□□ 0.11
SCAF1-203ENST00000598359 RNPEPQ9H4A4 650 aa15.75■□□□□ 0.11
SCAF1-203ENST00000598359 NCOA5Q9HCD5 579 aaKnown RBP15.75■□□□□ 0.11
SCAF1-203ENST00000598359 SETD4Q9NVD3 440 aa15.75■□□□□ 0.11
SCAF1-203ENST00000598359 TET1Q8NFU7 2136 aa15.74■□□□□ 0.11
SCAF1-203ENST00000598359 TCF7P36402 384 aaPredicted RBP15.74■□□□□ 0.11
SCAF1-203ENST00000598359 THPOP40225 353 aa15.74■□□□□ 0.11
SCAF1-203ENST00000598359 RCAN1P53805 252 aa15.74■□□□□ 0.11
SCAF1-203ENST00000598359 CCT2P78371 535 aaKnown RBP15.74■□□□□ 0.11
SCAF1-203ENST00000598359 RBL2Q08999 1139 aa15.74■□□□□ 0.11
SCAF1-203ENST00000598359 PFKFB3Q16875 520 aaPredicted RBP15.74■□□□□ 0.11
SCAF1-203ENST00000598359 JAKMIP3Q5VZ66 844 aa15.74■□□□□ 0.11
SCAF1-203ENST00000598359 SERINC5Q86VE9 423 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms