RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 ZBED2Q9BTP6 218 aa14□□□□□ -0.17
SOX2-OT-228ENST00000597828 MLXIPQ9HAP2 919 aa14□□□□□ -0.17
SOX2-OT-228ENST00000597828 LY9Q9HBG7 655 aa14□□□□□ -0.17
SOX2-OT-228ENST00000597828 RTEL1Q9NZ71 1219 aa14□□□□□ -0.17
SOX2-OT-228ENST00000597828 RAPGEFL1Q9UHV5 662 aa14□□□□□ -0.17
SOX2-OT-228ENST00000597828 COL4A6Q14031 1691 aa13.99□□□□□ -0.17
SOX2-OT-228ENST00000597828 PPFIA4O75335 1185 aa13.99□□□□□ -0.17
SOX2-OT-228ENST00000597828 GJB5O95377 273 aa13.99□□□□□ -0.17
SOX2-OT-228ENST00000597828 PLEKHA8P1O95397 391 aa13.99□□□□□ -0.17
SOX2-OT-228ENST00000597828 CTSHP09668 335 aa13.99□□□□□ -0.17
SOX2-OT-228ENST00000597828 SMIM10L2AP0DMW4 78 aa13.99□□□□□ -0.17
SOX2-OT-228ENST00000597828 SMIM10L2BP0DMW5 78 aa13.99□□□□□ -0.17
SOX2-OT-228ENST00000597828 RXRAP19793 462 aa13.99□□□□□ -0.17
SOX2-OT-228ENST00000597828 THPOP40225 353 aa13.99□□□□□ -0.17
SOX2-OT-228ENST00000597828 KCNV1Q6PIU1 500 aa13.99□□□□□ -0.17
SOX2-OT-228ENST00000597828 USP17L6PQ6QN14 398 aa13.99□□□□□ -0.17
SOX2-OT-228ENST00000597828 CATIPQ7Z7H3 387 aa13.99□□□□□ -0.17
SOX2-OT-228ENST00000597828 SERINC5Q86VE9 423 aa13.99□□□□□ -0.17
SOX2-OT-228ENST00000597828 ZNF654Q8IZM8 581 aa13.99□□□□□ -0.17
SOX2-OT-228ENST00000597828 CMTR1Q8N1G2 835 aaKnown RBP13.99□□□□□ -0.17
SOX2-OT-228ENST00000597828 H3BRB1 525 aa13.98□□□□□ -0.17
SOX2-OT-228ENST00000597828 TREHO43280 583 aa13.98□□□□□ -0.17
SOX2-OT-228ENST00000597828 LGR5O75473 907 aa13.98□□□□□ -0.17
SOX2-OT-228ENST00000597828 BMP1P13497 986 aa13.98□□□□□ -0.17
SOX2-OT-228ENST00000597828 SP4Q02446 784 aa13.98□□□□□ -0.17
SOX2-OT-228ENST00000597828 MKRN4PQ13434 485 aaPredicted RBP13.98□□□□□ -0.17
SOX2-OT-228ENST00000597828 SART3Q15020 963 aaKnown RBP13.98□□□□□ -0.17
SOX2-OT-228ENST00000597828 CYFIP1Q7L576 1253 aa13.98□□□□□ -0.17
SOX2-OT-228ENST00000597828 SAMD3Q8N6K7 520 aa13.98□□□□□ -0.17
SOX2-OT-228ENST00000597828 IL27Q8NEV9 243 aa13.98□□□□□ -0.17
SOX2-OT-228ENST00000597828 DBF4BQ8NFT6 615 aa13.98□□□□□ -0.17
SOX2-OT-228ENST00000597828 MAP4K1Q92918 833 aa13.98□□□□□ -0.17
SOX2-OT-228ENST00000597828 ATP6V0A1Q93050 837 aa13.98□□□□□ -0.17
SOX2-OT-228ENST00000597828 INPP4AQ96PE3 977 aaPredicted RBP13.98□□□□□ -0.17
SOX2-OT-228ENST00000597828 TSPYL2Q9H2G4 693 aaPredicted RBP13.98□□□□□ -0.17
SOX2-OT-228ENST00000597828 TUT1Q9H6E5 874 aaKnown RBP13.98□□□□□ -0.17
SOX2-OT-228ENST00000597828 ABHD14A-ACY1A0A1B0GW23 586 aa13.97□□□□□ -0.17
SOX2-OT-228ENST00000597828 hCG_1642624A0A1W2PR95 340 aa13.97□□□□□ -0.17
SOX2-OT-228ENST00000597828 C17orf102A2RUQ5 167 aa13.97□□□□□ -0.17
SOX2-OT-228ENST00000597828 LINC01553A4QN01 128 aa13.97□□□□□ -0.17
SOX2-OT-228ENST00000597828 NOP56O00567 594 aaKnown RBP13.97□□□□□ -0.17
SOX2-OT-228ENST00000597828 PARNO95453 639 aaKnown RBP13.97□□□□□ -0.17
SOX2-OT-228ENST00000597828 TGFB3P10600 412 aa13.97□□□□□ -0.17
SOX2-OT-228ENST00000597828 HOXC8P31273 242 aa13.97□□□□□ -0.17
SOX2-OT-228ENST00000597828 ICAM3P32942 547 aa13.97□□□□□ -0.17
SOX2-OT-228ENST00000597828 IKBKEQ14164 716 aa13.97□□□□□ -0.17
SOX2-OT-228ENST00000597828 GPR20Q99678 358 aa13.97□□□□□ -0.17
SOX2-OT-228ENST00000597828 RNPEPQ9H4A4 650 aa13.97□□□□□ -0.17
SOX2-OT-228ENST00000597828 SUGCTQ9HAC7 445 aa13.97□□□□□ -0.17
SOX2-OT-228ENST00000597828 BDP1A6H8Y1 2624 aa13.97□□□□□ -0.17
SOX2-OT-228ENST00000597828 RSPH10B2B2RC85 870 aa13.96□□□□□ -0.17
SOX2-OT-228ENST00000597828 SPATA31C2B4DYI2 1134 aa13.96□□□□□ -0.17
SOX2-OT-228ENST00000597828 SH2B2O14492 632 aaPredicted RBP13.96□□□□□ -0.17
SOX2-OT-228ENST00000597828 MEIS2O14770 477 aa13.96□□□□□ -0.17
SOX2-OT-228ENST00000597828 PRC1O43663 620 aa13.96□□□□□ -0.17
SOX2-OT-228ENST00000597828 DDAH1O94760 285 aa13.96□□□□□ -0.17
SOX2-OT-228ENST00000597828 RSPH10BP0C881 870 aa13.96□□□□□ -0.17
SOX2-OT-228ENST00000597828 GNPTABQ3T906 1256 aa13.96□□□□□ -0.17
SOX2-OT-228ENST00000597828 UTP14CQ5TAP6 766 aaKnown RBP13.96□□□□□ -0.17
SOX2-OT-228ENST00000597828 METTL7BQ6UX53 244 aa13.96□□□□□ -0.17
SOX2-OT-228ENST00000597828 SKAP1Q86WV1 359 aa13.96□□□□□ -0.17
SOX2-OT-228ENST00000597828 MYOCDQ8IZQ8 938 aa13.96□□□□□ -0.17
SOX2-OT-228ENST00000597828 SRBD1Q8N5C6 995 aaKnown RBP13.96□□□□□ -0.17
SOX2-OT-228ENST00000597828 CTCFLQ8NI51 663 aaPredicted RBP13.96□□□□□ -0.17
SOX2-OT-228ENST00000597828 SMARCC2Q8TAQ2 1214 aa13.96□□□□□ -0.17
SOX2-OT-228ENST00000597828 C17orf80Q9BSJ5 609 aa13.96□□□□□ -0.17
SOX2-OT-228ENST00000597828 SPZ1Q9BXG8 430 aa13.96□□□□□ -0.17
SOX2-OT-228ENST00000597828 LRRC2Q9BYS8 371 aa13.96□□□□□ -0.17
SOX2-OT-228ENST00000597828 LSG1Q9H089 658 aaKnown RBP13.96□□□□□ -0.17
SOX2-OT-228ENST00000597828 SETD4Q9NVD3 440 aa13.96□□□□□ -0.17
SOX2-OT-228ENST00000597828 FIBPO43427 364 aa13.95□□□□□ -0.18
SOX2-OT-228ENST00000597828 COL9A1P20849 921 aa13.95□□□□□ -0.18
SOX2-OT-228ENST00000597828 ERVK-21P61565 698 aa13.95□□□□□ -0.18
SOX2-OT-228ENST00000597828 TRAF1Q13077 416 aa13.95□□□□□ -0.18
SOX2-OT-228ENST00000597828 UBE2SQ16763 222 aa13.95□□□□□ -0.18
SOX2-OT-228ENST00000597828 PLEKHG4Q58EX7 1191 aa13.95□□□□□ -0.18
SOX2-OT-228ENST00000597828 RRP36Q96EU6 259 aaKnown RBP13.95□□□□□ -0.18
SOX2-OT-228ENST00000597828 TGS1Q96RS0 853 aaKnown RBP13.95□□□□□ -0.18
SOX2-OT-228ENST00000597828 RAD9AQ99638 391 aa13.95□□□□□ -0.18
SOX2-OT-228ENST00000597828 EMSYQ7Z589 1322 aa13.94□□□□□ -0.18
SOX2-OT-228ENST00000597828 SLC27A2O14975 620 aa13.94□□□□□ -0.18
SOX2-OT-228ENST00000597828 EFCAB14O75071 495 aa13.94□□□□□ -0.18
SOX2-OT-228ENST00000597828 CENPBP07199 599 aaPredicted RBP13.94□□□□□ -0.18
SOX2-OT-228ENST00000597828 NEDD9Q14511 834 aa13.94□□□□□ -0.18
SOX2-OT-228ENST00000597828 PCNX4Q63HM2 1172 aa13.94□□□□□ -0.18
SOX2-OT-228ENST00000597828 CASC1Q6TDU7 716 aa13.94□□□□□ -0.18
SOX2-OT-228ENST00000597828 NFXL1Q6ZNB6 911 aa13.94□□□□□ -0.18
SOX2-OT-228ENST00000597828 LMBR1Q8WVP7 490 aa13.94□□□□□ -0.18
SOX2-OT-228ENST00000597828 PKD2L1Q9P0L9 805 aa13.94□□□□□ -0.18
SOX2-OT-228ENST00000597828 SEC63Q9UGP8 760 aaKnown RBP13.94□□□□□ -0.18
SOX2-OT-228ENST00000597828 C5orf42Q9H799 3197 aa13.94□□□□□ -0.18
SOX2-OT-228ENST00000597828 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.93□□□□□ -0.18
SOX2-OT-228ENST00000597828 CCDC69A6NI79 296 aa13.93□□□□□ -0.18
SOX2-OT-228ENST00000597828 PIK3CDO00329 1044 aa13.93□□□□□ -0.18
SOX2-OT-228ENST00000597828 ATP9AO75110 1047 aa13.93□□□□□ -0.18
SOX2-OT-228ENST00000597828 STAM2O75886 525 aa13.93□□□□□ -0.18
SOX2-OT-228ENST00000597828 UPP2O95045 317 aa13.93□□□□□ -0.18
SOX2-OT-228ENST00000597828 AMHP03971 560 aa13.93□□□□□ -0.18
SOX2-OT-228ENST00000597828 KIF5BP33176 963 aa13.93□□□□□ -0.18
SOX2-OT-228ENST00000597828 ADAM17P78536 824 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms