RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 SLC37A4O43826 429 aa16.27■□□□□ 0.2
VRK3-213ENST00000597215 SORBS3O60504 671 aa16.27■□□□□ 0.2
VRK3-213ENST00000597215 FARP2O94887 1054 aaPredicted RBP16.27■□□□□ 0.2
VRK3-213ENST00000597215 ATP2B1P20020 1258 aa16.27■□□□□ 0.2
VRK3-213ENST00000597215 ORC2Q13416 577 aaPredicted RBP16.27■□□□□ 0.2
VRK3-213ENST00000597215 GNASQ5JWF2 1037 aa16.27■□□□□ 0.2
VRK3-213ENST00000597215 CYFIP1Q7L576 1253 aa16.27■□□□□ 0.2
VRK3-213ENST00000597215 PCSK9Q8NBP7 692 aaKnown RBP16.27■□□□□ 0.2
VRK3-213ENST00000597215 PPTC7Q8NI37 304 aa16.27■□□□□ 0.2
VRK3-213ENST00000597215 AFG1LQ8WV93 481 aa16.27■□□□□ 0.2
VRK3-213ENST00000597215 TSEN34Q9BSV6 310 aaKnown RBP16.27■□□□□ 0.2
VRK3-213ENST00000597215 DAXXQ9UER7 740 aaPredicted RBP16.27■□□□□ 0.2
VRK3-213ENST00000597215 MOXD2PA6NHM9 499 aa16.26■□□□□ 0.19
VRK3-213ENST00000597215 A6NJR5 290 aa16.26■□□□□ 0.19
VRK3-213ENST00000597215 NOP56O00567 594 aaKnown RBP16.26■□□□□ 0.19
VRK3-213ENST00000597215 MSH4O15457 936 aa16.26■□□□□ 0.19
VRK3-213ENST00000597215 MMP3P08254 477 aa16.26■□□□□ 0.19
VRK3-213ENST00000597215 IRX5P78411 483 aaPredicted RBP16.26■□□□□ 0.19
VRK3-213ENST00000597215 BEX3Q00994 111 aa16.26■□□□□ 0.19
VRK3-213ENST00000597215 ITGB3BPQ13352 177 aaPredicted RBP16.26■□□□□ 0.19
VRK3-213ENST00000597215 KCNA10Q16322 511 aa16.26■□□□□ 0.19
VRK3-213ENST00000597215 RILPL1Q5EBL4 403 aa16.26■□□□□ 0.19
VRK3-213ENST00000597215 TTC38Q5R3I4 469 aa16.26■□□□□ 0.19
VRK3-213ENST00000597215 FERMT3Q86UX7 667 aa16.26■□□□□ 0.19
VRK3-213ENST00000597215 ETNPPLQ8TBG4 499 aa16.26■□□□□ 0.19
VRK3-213ENST00000597215 JPH1Q9HDC5 661 aaPredicted RBP16.26■□□□□ 0.19
VRK3-213ENST00000597215 TBC1D22BQ9NU19 505 aa16.26■□□□□ 0.19
VRK3-213ENST00000597215 TCEAL9Q9UHQ7 104 aa16.26■□□□□ 0.19
VRK3-213ENST00000597215 WNT7AO00755 349 aa16.25■□□□□ 0.19
VRK3-213ENST00000597215 TBX3O15119 743 aa16.25■□□□□ 0.19
VRK3-213ENST00000597215 NEMFO60524 1076 aa16.25■□□□□ 0.19
VRK3-213ENST00000597215 KPNA6O60684 536 aa16.25■□□□□ 0.19
VRK3-213ENST00000597215 CAPN15O75808 1086 aa16.25■□□□□ 0.19
VRK3-213ENST00000597215 MCM7P33993 719 aa16.25■□□□□ 0.19
VRK3-213ENST00000597215 RESTQ13127 1097 aa16.25■□□□□ 0.19
VRK3-213ENST00000597215 HSDL1Q3SXM5 330 aa16.25■□□□□ 0.19
VRK3-213ENST00000597215 CCSAPQ6IQ19 270 aaPredicted RBP16.25■□□□□ 0.19
VRK3-213ENST00000597215 POTEDQ86YR6 584 aa16.25■□□□□ 0.19
VRK3-213ENST00000597215 SLC5A5Q92911 643 aa16.25■□□□□ 0.19
VRK3-213ENST00000597215 FAM20AQ96MK3 541 aa16.25■□□□□ 0.19
VRK3-213ENST00000597215 RIT2Q99578 217 aa16.25■□□□□ 0.19
VRK3-213ENST00000597215 ZSCAN16Q9H4T2 348 aaPredicted RBP16.25■□□□□ 0.19
VRK3-213ENST00000597215 BCAS3Q9H6U6 928 aa16.25■□□□□ 0.19
VRK3-213ENST00000597215 KCNMB3Q9NPA1 279 aa16.25■□□□□ 0.19
VRK3-213ENST00000597215 TSHZ2Q9NRE2 1034 aa16.25■□□□□ 0.19
VRK3-213ENST00000597215 POLR3EQ9NVU0 708 aa16.25■□□□□ 0.19
VRK3-213ENST00000597215 SLC9A2Q9UBY0 812 aa16.25■□□□□ 0.19
VRK3-213ENST00000597215 PHF24Q9UPV7 400 aa16.25■□□□□ 0.19
VRK3-213ENST00000597215 DDX39AO00148 427 aaKnown RBP16.24■□□□□ 0.19
VRK3-213ENST00000597215 MARCH6O60337 910 aa16.24■□□□□ 0.19
VRK3-213ENST00000597215 GAS7O60861 476 aa16.24■□□□□ 0.19
VRK3-213ENST00000597215 BAG4O95429 457 aaKnown RBP16.24■□□□□ 0.19
VRK3-213ENST00000597215 ASGR1P07306 291 aa16.24■□□□□ 0.19
VRK3-213ENST00000597215 MYL3P08590 195 aa16.24■□□□□ 0.19
VRK3-213ENST00000597215 HOXD8P13378 290 aaPredicted RBP16.24■□□□□ 0.19
VRK3-213ENST00000597215 MNX1P50219 401 aaPredicted RBP16.24■□□□□ 0.19
VRK3-213ENST00000597215 TOB1P50616 345 aaPredicted RBP16.24■□□□□ 0.19
VRK3-213ENST00000597215 SP4Q02446 784 aa16.24■□□□□ 0.19
VRK3-213ENST00000597215 ZNF174Q15697 407 aa16.24■□□□□ 0.19
VRK3-213ENST00000597215 CALCRLQ16602 461 aa16.24■□□□□ 0.19
VRK3-213ENST00000597215 DGKDQ16760 1214 aa16.24■□□□□ 0.19
VRK3-213ENST00000597215 LRCH2Q5VUJ6 765 aa16.24■□□□□ 0.19
VRK3-213ENST00000597215 UIMC1Q96RL1 719 aa16.24■□□□□ 0.19
VRK3-213ENST00000597215 GPR20Q99678 358 aa16.24■□□□□ 0.19
VRK3-213ENST00000597215 TEKT3Q9BXF9 490 aa16.24■□□□□ 0.19
VRK3-213ENST00000597215 DHX15O43143 795 aaKnown RBP16.23■□□□□ 0.19
VRK3-213ENST00000597215 PPFIA4O75335 1185 aa16.23■□□□□ 0.19
VRK3-213ENST00000597215 CABYRO75952 493 aa16.23■□□□□ 0.19
VRK3-213ENST00000597215 ZSCAN22P10073 491 aaPredicted RBP16.23■□□□□ 0.19
VRK3-213ENST00000597215 ACLYP53396 1101 aa16.23■□□□□ 0.19
VRK3-213ENST00000597215 KRT76Q01546 638 aa16.23■□□□□ 0.19
VRK3-213ENST00000597215 NBR1Q14596 966 aa16.23■□□□□ 0.19
VRK3-213ENST00000597215 NECAB2Q7Z6G3 386 aa16.23■□□□□ 0.19
VRK3-213ENST00000597215 SLFN12Q8IYM2 578 aa16.23■□□□□ 0.19
VRK3-213ENST00000597215 DIS3LQ8TF46 1054 aaKnown RBP16.23■□□□□ 0.19
VRK3-213ENST00000597215 SEPT1Q8WYJ6 367 aa16.23■□□□□ 0.19
VRK3-213ENST00000597215 PAWRQ96IZ0 340 aaKnown RBP16.23■□□□□ 0.19
VRK3-213ENST00000597215 ELP1O95163 1332 aa16.22■□□□□ 0.19
VRK3-213ENST00000597215 A0A1W2PQ45 241 aaPredicted RBP16.22■□□□□ 0.19
VRK3-213ENST00000597215 A0A1W2PQY0 241 aa16.22■□□□□ 0.19
VRK3-213ENST00000597215 PSMD10O75832 226 aa16.22■□□□□ 0.19
VRK3-213ENST00000597215 COL6A1P12109 1028 aa16.22■□□□□ 0.19
VRK3-213ENST00000597215 ACTR2P61160 394 aa16.22■□□□□ 0.19
VRK3-213ENST00000597215 PURAQ00577 322 aaKnown RBP16.22■□□□□ 0.19
VRK3-213ENST00000597215 ZNF746Q6NUN9 644 aaPredicted RBP16.22■□□□□ 0.19
VRK3-213ENST00000597215 CXCL17Q6UXB2 119 aa16.22■□□□□ 0.19
VRK3-213ENST00000597215 UBE2Q1Q7Z7E8 422 aa16.22■□□□□ 0.19
VRK3-213ENST00000597215 HAS1Q92839 578 aa16.22■□□□□ 0.19
VRK3-213ENST00000597215 GLT1D1Q96MS3 346 aa16.22■□□□□ 0.19
VRK3-213ENST00000597215 MTG1Q9BT17 334 aaPredicted RBP16.22■□□□□ 0.19
VRK3-213ENST00000597215 C11orf49Q9H6J7 331 aa16.22■□□□□ 0.19
VRK3-213ENST00000597215 RBM19Q9Y4C8 960 aaKnown RBP16.22■□□□□ 0.19
VRK3-213ENST00000597215 PCDHB6Q9Y5E3 794 aa16.22■□□□□ 0.19
VRK3-213ENST00000597215 MYH15Q9Y2K3 1946 aa16.21■□□□□ 0.19
VRK3-213ENST00000597215 F13A1P00488 732 aa16.21■□□□□ 0.19
VRK3-213ENST00000597215 OR52Z1P0C646 297 aa16.21■□□□□ 0.19
VRK3-213ENST00000597215 PKP1Q13835 747 aa16.21■□□□□ 0.19
VRK3-213ENST00000597215 SMAP1Q8IYB5 467 aaPredicted RBP16.21■□□□□ 0.19
VRK3-213ENST00000597215 GJA10Q969M2 543 aa16.21■□□□□ 0.19
VRK3-213ENST00000597215 FERMT2Q96AC1 680 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms