RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 KCNMB3Q9NPA1 279 aa17.57■□□□□ 0.4
SMCO4-206ENST00000596676 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.57■□□□□ 0.4
SMCO4-206ENST00000596676 CLIC4Q9Y696 253 aa17.57■□□□□ 0.4
SMCO4-206ENST00000596676 KIAA0100Q14667 2235 aaKnown RBP17.56■□□□□ 0.4
SMCO4-206ENST00000596676 NEMFO60524 1076 aa17.56■□□□□ 0.4
SMCO4-206ENST00000596676 SGPL1O95470 568 aa17.56■□□□□ 0.4
SMCO4-206ENST00000596676 CCNE2O96020 404 aa17.56■□□□□ 0.4
SMCO4-206ENST00000596676 TFRCP02786 760 aaKnown RBP17.56■□□□□ 0.4
SMCO4-206ENST00000596676 EN2P19622 333 aaPredicted RBP17.56■□□□□ 0.4
SMCO4-206ENST00000596676 GJA9P57773 515 aa17.56■□□□□ 0.4
SMCO4-206ENST00000596676 SETQ01105 290 aaPredicted RBP17.56■□□□□ 0.4
SMCO4-206ENST00000596676 KCNV1Q6PIU1 500 aa17.56■□□□□ 0.4
SMCO4-206ENST00000596676 U2AF1L4Q8WU68 220 aaKnown RBP17.56■□□□□ 0.4
SMCO4-206ENST00000596676 PPP1R13LQ8WUF5 828 aa17.56■□□□□ 0.4
SMCO4-206ENST00000596676 SLC5A5Q92911 643 aa17.56■□□□□ 0.4
SMCO4-206ENST00000596676 USP28Q96RU2 1077 aa17.56■□□□□ 0.4
SMCO4-206ENST00000596676 AP5M1Q9H0R1 490 aa17.56■□□□□ 0.4
SMCO4-206ENST00000596676 UPF3AQ9H1J1 476 aaKnown RBP17.56■□□□□ 0.4
SMCO4-206ENST00000596676 ZSCAN16Q9H4T2 348 aaPredicted RBP17.56■□□□□ 0.4
SMCO4-206ENST00000596676 MLXIPQ9HAP2 919 aa17.56■□□□□ 0.4
SMCO4-206ENST00000596676 MAFGO15525 162 aa17.55■□□□□ 0.4
SMCO4-206ENST00000596676 PSMD10O75832 226 aa17.55■□□□□ 0.4
SMCO4-206ENST00000596676 C6orf222P0C671 652 aaPredicted RBP17.55■□□□□ 0.4
SMCO4-206ENST00000596676 TRAPPC10P48553 1259 aa17.55■□□□□ 0.4
SMCO4-206ENST00000596676 PTGDRQ13258 359 aa17.55■□□□□ 0.4
SMCO4-206ENST00000596676 LRRC41Q15345 812 aa17.55■□□□□ 0.4
SMCO4-206ENST00000596676 CALCRLQ16602 461 aa17.55■□□□□ 0.4
SMCO4-206ENST00000596676 RILPL1Q5EBL4 403 aa17.55■□□□□ 0.4
SMCO4-206ENST00000596676 CDHR1Q96JP9 859 aa17.55■□□□□ 0.4
SMCO4-206ENST00000596676 SPATA33Q96N06 139 aa17.55■□□□□ 0.4
SMCO4-206ENST00000596676 MTMR9Q96QG7 549 aa17.55■□□□□ 0.4
SMCO4-206ENST00000596676 SENP7Q9BQF6 1050 aa17.55■□□□□ 0.4
SMCO4-206ENST00000596676 CRISPLD2Q9H0B8 497 aa17.55■□□□□ 0.4
SMCO4-206ENST00000596676 GSTTP1A0A1W2PQM5 241 aa17.54■□□□□ 0.4
SMCO4-206ENST00000596676 CCDC85CA6NKD9 419 aa17.54■□□□□ 0.4
SMCO4-206ENST00000596676 NKRFO15226 690 aaKnown RBP eCLIP17.54■□□□□ 0.4
SMCO4-206ENST00000596676 TXKP42681 527 aa17.54■□□□□ 0.4
SMCO4-206ENST00000596676 GJA8P48165 433 aa17.54■□□□□ 0.4
SMCO4-206ENST00000596676 MNX1P50219 401 aaPredicted RBP17.54■□□□□ 0.4
SMCO4-206ENST00000596676 SOX10P56693 466 aa17.54■□□□□ 0.4
SMCO4-206ENST00000596676 NEDD9Q14511 834 aa17.54■□□□□ 0.4
SMCO4-206ENST00000596676 SF3A1Q15459 793 aaKnown RBP17.54■□□□□ 0.4
SMCO4-206ENST00000596676 KCNA10Q16322 511 aa17.54■□□□□ 0.4
SMCO4-206ENST00000596676 IL17AQ16552 155 aa17.54■□□□□ 0.4
SMCO4-206ENST00000596676 LRCH2Q5VUJ6 765 aa17.54■□□□□ 0.4
SMCO4-206ENST00000596676 KLHDC9Q8NEP7 349 aa17.54■□□□□ 0.4
SMCO4-206ENST00000596676 GPR20Q99678 358 aa17.54■□□□□ 0.4
SMCO4-206ENST00000596676 NAP1L4Q99733 375 aaKnown RBP17.54■□□□□ 0.4
SMCO4-206ENST00000596676 SDF4Q9BRK5 362 aa17.54■□□□□ 0.4
SMCO4-206ENST00000596676 TMEM106CQ9BVX2 250 aa17.54■□□□□ 0.4
SMCO4-206ENST00000596676 UNC45AQ9H3U1 944 aa17.54■□□□□ 0.4
SMCO4-206ENST00000596676 OGDHLQ9ULD0 1010 aa17.54■□□□□ 0.4
SMCO4-206ENST00000596676 Q9Y3F1 56 aa17.54■□□□□ 0.4
SMCO4-206ENST00000596676 MYH15Q9Y2K3 1946 aa17.54■□□□□ 0.4
SMCO4-206ENST00000596676 BRCA2P51587 3418 aa17.54■□□□□ 0.4
SMCO4-206ENST00000596676 NFASCO94856 1347 aa17.53■□□□□ 0.4
SMCO4-206ENST00000596676 EML1O00423 815 aa17.53■□□□□ 0.4
SMCO4-206ENST00000596676 CHMP2AO43633 222 aa17.53■□□□□ 0.4
SMCO4-206ENST00000596676 MARCH6O60337 910 aa17.53■□□□□ 0.4
SMCO4-206ENST00000596676 MSCO60682 206 aa17.53■□□□□ 0.4
SMCO4-206ENST00000596676 MMP3P08254 477 aa17.53■□□□□ 0.4
SMCO4-206ENST00000596676 DNM1Q05193 864 aaKnown RBP17.53■□□□□ 0.4
SMCO4-206ENST00000596676 LAMC2Q13753 1193 aa17.53■□□□□ 0.4
SMCO4-206ENST00000596676 FSCN1Q16658 493 aaKnown RBP17.53■□□□□ 0.4
SMCO4-206ENST00000596676 GNASQ5JWF2 1037 aa17.53■□□□□ 0.4
SMCO4-206ENST00000596676 CCSAPQ6IQ19 270 aaPredicted RBP17.53■□□□□ 0.4
SMCO4-206ENST00000596676 METTL7BQ6UX53 244 aa17.53■□□□□ 0.4
SMCO4-206ENST00000596676 DIS3LQ8TF46 1054 aaKnown RBP17.53■□□□□ 0.4
SMCO4-206ENST00000596676 JPH1Q9HDC5 661 aaPredicted RBP17.53■□□□□ 0.4
SMCO4-206ENST00000596676 SLC9A2Q9UBY0 812 aa17.53■□□□□ 0.4
SMCO4-206ENST00000596676 VAV3Q9UKW4 847 aa17.53■□□□□ 0.4
SMCO4-206ENST00000596676 A6NJR5 290 aa17.52■□□□□ 0.4
SMCO4-206ENST00000596676 GAS7O60861 476 aa17.52■□□□□ 0.4
SMCO4-206ENST00000596676 MYL3P08590 195 aa17.52■□□□□ 0.4
SMCO4-206ENST00000596676 OR52Z1P0C646 297 aa17.52■□□□□ 0.4
SMCO4-206ENST00000596676 ACTR2P61160 394 aa17.52■□□□□ 0.4
SMCO4-206ENST00000596676 PTPAQ15257 358 aa17.52■□□□□ 0.4
SMCO4-206ENST00000596676 UTP14CQ5TAP6 766 aaKnown RBP17.52■□□□□ 0.4
SMCO4-206ENST00000596676 TRIM50Q86XT4 487 aa17.52■□□□□ 0.4
SMCO4-206ENST00000596676 EMID1Q96A84 441 aaPredicted RBP17.52■□□□□ 0.4
SMCO4-206ENST00000596676 FERMT2Q96AC1 680 aa17.52■□□□□ 0.4
SMCO4-206ENST00000596676 PCYT2Q99447 389 aa17.52■□□□□ 0.4
SMCO4-206ENST00000596676 RIT2Q99578 217 aa17.52■□□□□ 0.4
SMCO4-206ENST00000596676 TEKT3Q9BXF9 490 aa17.52■□□□□ 0.4
SMCO4-206ENST00000596676 TBC1D22BQ9NU19 505 aa17.52■□□□□ 0.4
SMCO4-206ENST00000596676 BAG4O95429 457 aaKnown RBP17.51■□□□□ 0.39
SMCO4-206ENST00000596676 ZNF286BP0CG31 522 aa17.51■□□□□ 0.39
SMCO4-206ENST00000596676 TECP42680 631 aa17.51■□□□□ 0.39
SMCO4-206ENST00000596676 NKX3-2P78367 333 aa17.51■□□□□ 0.39
SMCO4-206ENST00000596676 NUCB2P80303 420 aa17.51■□□□□ 0.39
SMCO4-206ENST00000596676 GRIN1Q05586 938 aa17.51■□□□□ 0.39
SMCO4-206ENST00000596676 SPIRE1Q08AE8 756 aa17.51■□□□□ 0.39
SMCO4-206ENST00000596676 B3GNT9Q6UX72 402 aa17.51■□□□□ 0.39
SMCO4-206ENST00000596676 CXCL17Q6UXB2 119 aa17.51■□□□□ 0.39
SMCO4-206ENST00000596676 PPTC7Q8NI37 304 aa17.51■□□□□ 0.39
SMCO4-206ENST00000596676 FAM20AQ96MK3 541 aa17.51■□□□□ 0.39
SMCO4-206ENST00000596676 TTC12Q9H892 705 aaPredicted RBP17.51■□□□□ 0.39
SMCO4-206ENST00000596676 NOP56O00567 594 aaKnown RBP17.5■□□□□ 0.39
SMCO4-206ENST00000596676 TBX3O15119 743 aa17.5■□□□□ 0.39
SMCO4-206ENST00000596676 ASGR1P07306 291 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms