RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 NOL7Q9UMY1 257 aaKnown RBP9.48□□□□□ -0.89
VRK3-211ENST00000596445 MTMR6Q9Y217 621 aa9.48□□□□□ -0.89
VRK3-211ENST00000596445 NFASCO94856 1347 aa9.48□□□□□ -0.89
VRK3-211ENST00000596445 WDR81Q562E7 1941 aa9.47□□□□□ -0.89
VRK3-211ENST00000596445 MYADML2A6NDP7 307 aa9.47□□□□□ -0.89
VRK3-211ENST00000596445 MSH4O15457 936 aa9.47□□□□□ -0.89
VRK3-211ENST00000596445 SLC37A4O43826 429 aa9.47□□□□□ -0.89
VRK3-211ENST00000596445 ZEB2O60315 1214 aa9.47□□□□□ -0.89
VRK3-211ENST00000596445 FARP2O94887 1054 aaPredicted RBP9.47□□□□□ -0.89
VRK3-211ENST00000596445 MYCNP04198 464 aaPredicted RBP9.47□□□□□ -0.89
VRK3-211ENST00000596445 MNX1P50219 401 aaPredicted RBP9.47□□□□□ -0.89
VRK3-211ENST00000596445 SOX10P56693 466 aa9.47□□□□□ -0.89
VRK3-211ENST00000596445 IRX5P78411 483 aaPredicted RBP9.47□□□□□ -0.89
VRK3-211ENST00000596445 BEX3Q00994 111 aa9.47□□□□□ -0.89
VRK3-211ENST00000596445 ITGB3BPQ13352 177 aaPredicted RBP9.47□□□□□ -0.89
VRK3-211ENST00000596445 ORC2Q13416 577 aaPredicted RBP9.47□□□□□ -0.89
VRK3-211ENST00000596445 KCNA10Q16322 511 aa9.47□□□□□ -0.89
VRK3-211ENST00000596445 RILPL1Q5EBL4 403 aa9.47□□□□□ -0.89
VRK3-211ENST00000596445 CCSAPQ6IQ19 270 aaPredicted RBP9.47□□□□□ -0.89
VRK3-211ENST00000596445 PCSK9Q8NBP7 692 aaKnown RBP9.47□□□□□ -0.89
VRK3-211ENST00000596445 ETNPPLQ8TBG4 499 aa9.47□□□□□ -0.89
VRK3-211ENST00000596445 AFG1LQ8WV93 481 aa9.47□□□□□ -0.89
VRK3-211ENST00000596445 SLC5A5Q92911 643 aa9.47□□□□□ -0.89
VRK3-211ENST00000596445 FAM20AQ96MK3 541 aa9.47□□□□□ -0.89
VRK3-211ENST00000596445 RIT2Q99578 217 aa9.47□□□□□ -0.89
VRK3-211ENST00000596445 ZSCAN16Q9H4T2 348 aaPredicted RBP9.47□□□□□ -0.89
VRK3-211ENST00000596445 JPH1Q9HDC5 661 aaPredicted RBP9.47□□□□□ -0.89
VRK3-211ENST00000596445 KCNMB3Q9NPA1 279 aa9.47□□□□□ -0.89
VRK3-211ENST00000596445 TBC1D22BQ9NU19 505 aa9.47□□□□□ -0.89
VRK3-211ENST00000596445 PKD2L1Q9P0L9 805 aa9.47□□□□□ -0.89
VRK3-211ENST00000596445 MYH15Q9Y2K3 1946 aa9.46□□□□□ -0.89
VRK3-211ENST00000596445 MOXD2PA6NHM9 499 aa9.46□□□□□ -0.9
VRK3-211ENST00000596445 NOP56O00567 594 aaKnown RBP9.46□□□□□ -0.9
VRK3-211ENST00000596445 WNT7AO00755 349 aa9.46□□□□□ -0.9
VRK3-211ENST00000596445 TBX3O15119 743 aa9.46□□□□□ -0.9
VRK3-211ENST00000596445 DHX15O43143 795 aaKnown RBP9.46□□□□□ -0.9
VRK3-211ENST00000596445 SORBS3O60504 671 aa9.46□□□□□ -0.9
VRK3-211ENST00000596445 KPNA6O60684 536 aa9.46□□□□□ -0.9
VRK3-211ENST00000596445 PPFIA4O75335 1185 aa9.46□□□□□ -0.9
VRK3-211ENST00000596445 BAG4O95429 457 aaKnown RBP9.46□□□□□ -0.9
VRK3-211ENST00000596445 ASGR1P07306 291 aa9.46□□□□□ -0.9
VRK3-211ENST00000596445 MMP3P08254 477 aa9.46□□□□□ -0.9
VRK3-211ENST00000596445 HOXD8P13378 290 aaPredicted RBP9.46□□□□□ -0.9
VRK3-211ENST00000596445 ATP2B1P20020 1258 aa9.46□□□□□ -0.9
VRK3-211ENST00000596445 MCM7P33993 719 aa9.46□□□□□ -0.9
VRK3-211ENST00000596445 TOB1P50616 345 aaPredicted RBP9.46□□□□□ -0.9
VRK3-211ENST00000596445 RESTQ13127 1097 aa9.46□□□□□ -0.9
VRK3-211ENST00000596445 DGKDQ16760 1214 aa9.46□□□□□ -0.9
VRK3-211ENST00000596445 HSDL1Q3SXM5 330 aa9.46□□□□□ -0.9
VRK3-211ENST00000596445 TTC38Q5R3I4 469 aa9.46□□□□□ -0.9
VRK3-211ENST00000596445 UBE2Q1Q7Z7E8 422 aa9.46□□□□□ -0.9
VRK3-211ENST00000596445 FERMT3Q86UX7 667 aa9.46□□□□□ -0.9
VRK3-211ENST00000596445 POTEDQ86YR6 584 aa9.46□□□□□ -0.9
VRK3-211ENST00000596445 UIMC1Q96RL1 719 aa9.46□□□□□ -0.9
VRK3-211ENST00000596445 TSHZ2Q9NRE2 1034 aa9.46□□□□□ -0.9
VRK3-211ENST00000596445 POLR3EQ9NVU0 708 aa9.46□□□□□ -0.9
VRK3-211ENST00000596445 SLC9A2Q9UBY0 812 aa9.46□□□□□ -0.9
VRK3-211ENST00000596445 DAXXQ9UER7 740 aaPredicted RBP9.46□□□□□ -0.9
VRK3-211ENST00000596445 PHF24Q9UPV7 400 aa9.46□□□□□ -0.9
VRK3-211ENST00000596445 MYH9P35579 1960 aaKnown RBP9.46□□□□□ -0.9
VRK3-211ENST00000596445 TNRC18O15417 2968 aaPredicted RBP9.45□□□□□ -0.9
VRK3-211ENST00000596445 SCN10AQ9Y5Y9 1956 aa9.45□□□□□ -0.9
VRK3-211ENST00000596445 MARCH6O60337 910 aa9.45□□□□□ -0.9
VRK3-211ENST00000596445 NEMFO60524 1076 aa9.45□□□□□ -0.9
VRK3-211ENST00000596445 GAS7O60861 476 aa9.45□□□□□ -0.9
VRK3-211ENST00000596445 PSMD10O75832 226 aa9.45□□□□□ -0.9
VRK3-211ENST00000596445 CABYRO75952 493 aa9.45□□□□□ -0.9
VRK3-211ENST00000596445 MYL3P08590 195 aa9.45□□□□□ -0.9
VRK3-211ENST00000596445 ZSCAN22P10073 491 aaPredicted RBP9.45□□□□□ -0.9
VRK3-211ENST00000596445 COL6A1P12109 1028 aa9.45□□□□□ -0.9
VRK3-211ENST00000596445 ACLYP53396 1101 aa9.45□□□□□ -0.9
VRK3-211ENST00000596445 PURAQ00577 322 aaKnown RBP9.45□□□□□ -0.9
VRK3-211ENST00000596445 KRT76Q01546 638 aa9.45□□□□□ -0.9
VRK3-211ENST00000596445 SP4Q02446 784 aa9.45□□□□□ -0.9
VRK3-211ENST00000596445 NBR1Q14596 966 aa9.45□□□□□ -0.9
VRK3-211ENST00000596445 ZNF174Q15697 407 aa9.45□□□□□ -0.9
VRK3-211ENST00000596445 CALCRLQ16602 461 aa9.45□□□□□ -0.9
VRK3-211ENST00000596445 LRCH2Q5VUJ6 765 aa9.45□□□□□ -0.9
VRK3-211ENST00000596445 ZNF746Q6NUN9 644 aaPredicted RBP9.45□□□□□ -0.9
VRK3-211ENST00000596445 NECAB2Q7Z6G3 386 aa9.45□□□□□ -0.9
VRK3-211ENST00000596445 SLFN12Q8IYM2 578 aa9.45□□□□□ -0.9
VRK3-211ENST00000596445 DIS3LQ8TF46 1054 aaKnown RBP9.45□□□□□ -0.9
VRK3-211ENST00000596445 HAS1Q92839 578 aa9.45□□□□□ -0.9
VRK3-211ENST00000596445 PAWRQ96IZ0 340 aaKnown RBP9.45□□□□□ -0.9
VRK3-211ENST00000596445 GPR20Q99678 358 aa9.45□□□□□ -0.9
VRK3-211ENST00000596445 TEKT3Q9BXF9 490 aa9.45□□□□□ -0.9
VRK3-211ENST00000596445 TCEAL9Q9UHQ7 104 aa9.45□□□□□ -0.9
VRK3-211ENST00000596445 RBM19Q9Y4C8 960 aaKnown RBP9.45□□□□□ -0.9
VRK3-211ENST00000596445 PCDHB6Q9Y5E3 794 aa9.45□□□□□ -0.9
VRK3-211ENST00000596445 A0A1W2PQ45 241 aaPredicted RBP9.44□□□□□ -0.9
VRK3-211ENST00000596445 GSTTP1A0A1W2PQM5 241 aa9.44□□□□□ -0.9
VRK3-211ENST00000596445 A0A1W2PQY0 241 aa9.44□□□□□ -0.9
VRK3-211ENST00000596445 DDX39AO00148 427 aaKnown RBP9.44□□□□□ -0.9
VRK3-211ENST00000596445 ATG7O95352 703 aa9.44□□□□□ -0.9
VRK3-211ENST00000596445 CCNE2O96020 404 aa9.44□□□□□ -0.9
VRK3-211ENST00000596445 ACTR2P61160 394 aa9.44□□□□□ -0.9
VRK3-211ENST00000596445 PKP1Q13835 747 aa9.44□□□□□ -0.9
VRK3-211ENST00000596445 CXCL17Q6UXB2 119 aa9.44□□□□□ -0.9
VRK3-211ENST00000596445 SMAP1Q8IYB5 467 aaPredicted RBP9.44□□□□□ -0.9
VRK3-211ENST00000596445 SEPT1Q8WYJ6 367 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms