RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 MAP3K20Q9NYL2 800 aaKnown RBP18.4■□□□□ 0.54
USHBP1-206ENST00000596436 MYH7BA7E2Y1 1941 aa18.39■□□□□ 0.53
USHBP1-206ENST00000596436 KLF18A0A0U1RQI7 1052 aa18.39■□□□□ 0.53
USHBP1-206ENST00000596436 CALM1P0DP23 149 aa18.39■□□□□ 0.53
USHBP1-206ENST00000596436 CALM2P0DP24 149 aa18.39■□□□□ 0.53
USHBP1-206ENST00000596436 CALM3P0DP25 149 aa18.39■□□□□ 0.53
USHBP1-206ENST00000596436 EIF2AK2P19525 551 aaKnown RBP18.39■□□□□ 0.53
USHBP1-206ENST00000596436 PSMA5P28066 241 aa18.39■□□□□ 0.53
USHBP1-206ENST00000596436 MBTPS1Q14703 1052 aa18.39■□□□□ 0.53
USHBP1-206ENST00000596436 SKIV2LQ15477 1246 aaKnown RBP18.39■□□□□ 0.53
USHBP1-206ENST00000596436 ARHGEF16Q5VV41 709 aa18.39■□□□□ 0.53
USHBP1-206ENST00000596436 RUFY3Q7L099 469 aa18.39■□□□□ 0.53
USHBP1-206ENST00000596436 CMTR1Q8N1G2 835 aaKnown RBP18.39■□□□□ 0.53
USHBP1-206ENST00000596436 BRF1Q92994 677 aa18.39■□□□□ 0.53
USHBP1-206ENST00000596436 WNT8BQ93098 351 aa18.39■□□□□ 0.53
USHBP1-206ENST00000596436 PIGSQ96S52 555 aa18.39■□□□□ 0.53
USHBP1-206ENST00000596436 PDCD2LQ9BRP1 358 aa18.39■□□□□ 0.53
USHBP1-206ENST00000596436 C1QTNF1Q9BXJ1 281 aa18.39■□□□□ 0.53
USHBP1-206ENST00000596436 AGXT2Q9BYV1 514 aa18.39■□□□□ 0.53
USHBP1-206ENST00000596436 UPF3BQ9BZI7 483 aaKnown RBP18.39■□□□□ 0.53
USHBP1-206ENST00000596436 TM6SF1Q9BZW5 370 aa18.39■□□□□ 0.53
USHBP1-206ENST00000596436 EFCAB14O75071 495 aa18.38■□□□□ 0.53
USHBP1-206ENST00000596436 KIF5BP33176 963 aa18.38■□□□□ 0.53
USHBP1-206ENST00000596436 CHMP4BP1P59074 171 aa18.38■□□□□ 0.53
USHBP1-206ENST00000596436 ERVK-21P61565 698 aa18.38■□□□□ 0.53
USHBP1-206ENST00000596436 APOBRQ0VD83 1088 aa18.38■□□□□ 0.53
USHBP1-206ENST00000596436 MFSD10Q14728 455 aa18.38■□□□□ 0.53
USHBP1-206ENST00000596436 KIAA0753Q2KHM9 967 aa18.38■□□□□ 0.53
USHBP1-206ENST00000596436 MYSM1Q5VVJ2 828 aa18.38■□□□□ 0.53
USHBP1-206ENST00000596436 TMCO2Q7Z6W1 182 aaPredicted RBP18.38■□□□□ 0.53
USHBP1-206ENST00000596436 HOMER1Q86YM7 354 aa18.38■□□□□ 0.53
USHBP1-206ENST00000596436 SRBD1Q8N5C6 995 aaKnown RBP18.38■□□□□ 0.53
USHBP1-206ENST00000596436 SAMD3Q8N6K7 520 aa18.38■□□□□ 0.53
USHBP1-206ENST00000596436 C7orf31Q8N865 590 aa18.38■□□□□ 0.53
USHBP1-206ENST00000596436 FANCBQ8NB91 859 aa18.38■□□□□ 0.53
USHBP1-206ENST00000596436 HLA-CQ95604 372 aa18.38■□□□□ 0.53
USHBP1-206ENST00000596436 RAD9AQ99638 391 aa18.38■□□□□ 0.53
USHBP1-206ENST00000596436 SPZ1Q9BXG8 430 aa18.38■□□□□ 0.53
USHBP1-206ENST00000596436 AMNQ9BXJ7 453 aa18.38■□□□□ 0.53
USHBP1-206ENST00000596436 MRVI1Q9Y6F6 885 aa18.38■□□□□ 0.53
USHBP1-206ENST00000596436 ZBTB5O15062 677 aa18.37■□□□□ 0.53
USHBP1-206ENST00000596436 ZBTB43O43298 467 aa18.37■□□□□ 0.53
USHBP1-206ENST00000596436 PPFIA4O75335 1185 aa18.37■□□□□ 0.53
USHBP1-206ENST00000596436 CFBP00751 764 aa18.37■□□□□ 0.53
USHBP1-206ENST00000596436 HOXC8P31273 242 aa18.37■□□□□ 0.53
USHBP1-206ENST00000596436 TOB2Q14106 344 aaPredicted RBP18.37■□□□□ 0.53
USHBP1-206ENST00000596436 HIC1Q14526 733 aa18.37■□□□□ 0.53
USHBP1-206ENST00000596436 KCNV1Q6PIU1 500 aa18.37■□□□□ 0.53
USHBP1-206ENST00000596436 TMTC3Q6ZXV5 915 aa18.37■□□□□ 0.53
USHBP1-206ENST00000596436 VSIG10LQ86VR7 867 aa18.37■□□□□ 0.53
USHBP1-206ENST00000596436 FBXL16Q8N461 479 aa18.37■□□□□ 0.53
USHBP1-206ENST00000596436 PIBF1Q8WXW3 757 aa18.37■□□□□ 0.53
USHBP1-206ENST00000596436 ZNF286BP0CG31 522 aa18.36■□□□□ 0.53
USHBP1-206ENST00000596436 PLA2G5P39877 138 aa18.36■□□□□ 0.53
USHBP1-206ENST00000596436 FGD1P98174 961 aa18.36■□□□□ 0.53
USHBP1-206ENST00000596436 COL4A6Q14031 1691 aa18.36■□□□□ 0.53
USHBP1-206ENST00000596436 HSDL1Q3SXM5 330 aa18.36■□□□□ 0.53
USHBP1-206ENST00000596436 CELF3Q5SZQ8 465 aaKnown RBP18.36■□□□□ 0.53
USHBP1-206ENST00000596436 ZNF618Q5T7W0 954 aa18.36■□□□□ 0.53
USHBP1-206ENST00000596436 MICAL3Q7RTP6 2002 aa18.36■□□□□ 0.53
USHBP1-206ENST00000596436 DHX37Q8IY37 1157 aaKnown RBP18.36■□□□□ 0.53
USHBP1-206ENST00000596436 IL17RAQ96F46 866 aa18.36■□□□□ 0.53
USHBP1-206ENST00000596436 SUGCTQ9HAC7 445 aa18.36■□□□□ 0.53
USHBP1-206ENST00000596436 BRWD1Q9NSI6 2320 aa18.36■□□□□ 0.53
USHBP1-206ENST00000596436 FAM217BQ9NTX9 383 aaPredicted RBP18.36■□□□□ 0.53
USHBP1-206ENST00000596436 CYP46A1Q9Y6A2 500 aa18.36■□□□□ 0.53
USHBP1-206ENST00000596436 NID2Q14112 1375 aa18.35■□□□□ 0.53
USHBP1-206ENST00000596436 LINC01553A4QN01 128 aa18.35■□□□□ 0.53
USHBP1-206ENST00000596436 GOLGA8AA7E2F4 631 aa18.35■□□□□ 0.53
USHBP1-206ENST00000596436 GOLGA8BA8MQT2 603 aa18.35■□□□□ 0.53
USHBP1-206ENST00000596436 TGFB3P10600 412 aa18.35■□□□□ 0.53
USHBP1-206ENST00000596436 SMARCA1P28370 1054 aa18.35■□□□□ 0.53
USHBP1-206ENST00000596436 CDC27P30260 824 aa18.35■□□□□ 0.53
USHBP1-206ENST00000596436 GNAQP50148 359 aa18.35■□□□□ 0.53
USHBP1-206ENST00000596436 ANAPC15P60006 121 aa18.35■□□□□ 0.53
USHBP1-206ENST00000596436 IKBKEQ14164 716 aa18.35■□□□□ 0.53
USHBP1-206ENST00000596436 PGM5Q15124 567 aa18.35■□□□□ 0.53
USHBP1-206ENST00000596436 SYNE3Q6ZMZ3 975 aa18.35■□□□□ 0.53
USHBP1-206ENST00000596436 SERINC5Q86VE9 423 aa18.35■□□□□ 0.53
USHBP1-206ENST00000596436 GDPD5Q8WTR4 605 aa18.35■□□□□ 0.53
USHBP1-206ENST00000596436 C16orf70Q9BSU1 422 aa18.35■□□□□ 0.53
USHBP1-206ENST00000596436 ALG1Q9BT22 464 aa18.35■□□□□ 0.53
USHBP1-206ENST00000596436 ZBED2Q9BTP6 218 aa18.35■□□□□ 0.53
USHBP1-206ENST00000596436 EMSYQ7Z589 1322 aa18.34■□□□□ 0.53
USHBP1-206ENST00000596436 CNTNAP5Q8WYK1 1306 aa18.34■□□□□ 0.53
USHBP1-206ENST00000596436 PNMA6FA0A0J9YX94 578 aa18.34■□□□□ 0.53
USHBP1-206ENST00000596436 LGR5O75473 907 aa18.34■□□□□ 0.53
USHBP1-206ENST00000596436 ZNF200P98182 395 aaPredicted RBP18.34■□□□□ 0.53
USHBP1-206ENST00000596436 SP2Q02086 613 aa18.34■□□□□ 0.53
USHBP1-206ENST00000596436 RTN1Q16799 776 aa18.34■□□□□ 0.53
USHBP1-206ENST00000596436 CCDC82Q8N4S0 544 aa18.34■□□□□ 0.53
USHBP1-206ENST00000596436 IL31RAQ8NI17 732 aa18.34■□□□□ 0.53
USHBP1-206ENST00000596436 SP7Q8TDD2 431 aaPredicted RBP18.34■□□□□ 0.53
USHBP1-206ENST00000596436 TGS1Q96RS0 853 aaKnown RBP18.34■□□□□ 0.53
USHBP1-206ENST00000596436 LZTS2Q9BRK4 669 aa18.34■□□□□ 0.53
USHBP1-206ENST00000596436 NAP1L2Q9ULW6 460 aaPredicted RBP18.34■□□□□ 0.53
USHBP1-206ENST00000596436 ARIH1Q9Y4X5 557 aaPredicted RBP18.34■□□□□ 0.53
USHBP1-206ENST00000596436 FRMPD4Q14CM0 1322 aa18.33■□□□□ 0.53
USHBP1-206ENST00000596436 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.33■□□□□ 0.52
USHBP1-206ENST00000596436 hCG_1642624A0A1W2PR95 340 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms