RNA–Protein interactions for RNA: ENST00000595792.1

PNKP-206, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 645 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-206ENST00000595792 CUL9Q8IWT3 2517 aa20.54■□□□□ 0.88
PNKP-206ENST00000595792 RFXAPO00287 272 aa20.53■□□□□ 0.88
PNKP-206ENST00000595792 NEFLP07196 543 aa20.53■□□□□ 0.88
PNKP-206ENST00000595792 RBL2Q08999 1139 aa20.53■□□□□ 0.88
PNKP-206ENST00000595792 TRAF7Q6Q0C0 670 aa20.53■□□□□ 0.88
PNKP-206ENST00000595792 SPRED2Q7Z698 418 aa20.53■□□□□ 0.88
PNKP-206ENST00000595792 HERC6Q8IVU3 1022 aa20.53■□□□□ 0.88
PNKP-206ENST00000595792 SMARCC2Q8TAQ2 1214 aa20.53■□□□□ 0.88
PNKP-206ENST00000595792 INPP4AQ96PE3 977 aaPredicted RBP20.53■□□□□ 0.88
PNKP-206ENST00000595792 SEC63Q9UGP8 760 aaKnown RBP20.53■□□□□ 0.88
PNKP-206ENST00000595792 EPOPA6NHQ4 379 aa20.52■□□□□ 0.88
PNKP-206ENST00000595792 PPFIA4O75335 1185 aa20.52■□□□□ 0.88
PNKP-206ENST00000595792 CDC27P30260 824 aa20.52■□□□□ 0.88
PNKP-206ENST00000595792 DEFB103AP81534 67 aa20.52■□□□□ 0.88
PNKP-206ENST00000595792 KRT32Q14532 448 aa20.52■□□□□ 0.88
PNKP-206ENST00000595792 MBTPS1Q14703 1052 aa20.52■□□□□ 0.88
PNKP-206ENST00000595792 ZNF618Q5T7W0 954 aa20.52■□□□□ 0.88
PNKP-206ENST00000595792 TYW1BQ6NUM6 668 aa20.52■□□□□ 0.88
PNKP-206ENST00000595792 CYFIP1Q7L576 1253 aa20.52■□□□□ 0.88
PNKP-206ENST00000595792 TRIM50Q86XT4 487 aa20.52■□□□□ 0.88
PNKP-206ENST00000595792 MICALL1Q8N3F8 863 aa20.52■□□□□ 0.88
PNKP-206ENST00000595792 COL4A4P53420 1690 aaPredicted RBP20.51■□□□□ 0.87
PNKP-206ENST00000595792 KLF18A0A0U1RQI7 1052 aa20.51■□□□□ 0.87
PNKP-206ENST00000595792 SPATA31C2B4DYI2 1134 aa20.51■□□□□ 0.87
PNKP-206ENST00000595792 PIK3CDO00329 1044 aa20.51■□□□□ 0.87
PNKP-206ENST00000595792 LGALS2P05162 132 aa20.51■□□□□ 0.87
PNKP-206ENST00000595792 TGFB3P10600 412 aa20.51■□□□□ 0.87
PNKP-206ENST00000595792 WDR5P61964 334 aaKnown RBP20.51■□□□□ 0.87
PNKP-206ENST00000595792 SP4Q02446 784 aa20.51■□□□□ 0.87
PNKP-206ENST00000595792 PTK7Q13308 1070 aa20.51■□□□□ 0.87
PNKP-206ENST00000595792 UBE2SQ16763 222 aa20.51■□□□□ 0.87
PNKP-206ENST00000595792 GNPTABQ3T906 1256 aa20.51■□□□□ 0.87
PNKP-206ENST00000595792 JAKMIP1Q96N16 626 aaKnown RBP20.51■□□□□ 0.87
PNKP-206ENST00000595792 LCHNA4D1U4 455 aa20.5■□□□□ 0.87
PNKP-206ENST00000595792 ZBTB43O43298 467 aa20.5■□□□□ 0.87
PNKP-206ENST00000595792 FIBPO43427 364 aa20.5■□□□□ 0.87
PNKP-206ENST00000595792 BAIAP3O94812 1187 aa20.5■□□□□ 0.87
PNKP-206ENST00000595792 CXCL10P02778 98 aa20.5■□□□□ 0.87
PNKP-206ENST00000595792 ICAM3P32942 547 aa20.5■□□□□ 0.87
PNKP-206ENST00000595792 RTN1Q16799 776 aa20.5■□□□□ 0.87
PNKP-206ENST00000595792 WWC2Q6AWC2 1192 aa20.5■□□□□ 0.87
PNKP-206ENST00000595792 CUL5Q93034 780 aa20.5■□□□□ 0.87
PNKP-206ENST00000595792 WDR81Q562E7 1941 aa20.49■□□□□ 0.87
PNKP-206ENST00000595792 H3BRB1 525 aa20.49■□□□□ 0.87
PNKP-206ENST00000595792 NOP56O00567 594 aaKnown RBP20.49■□□□□ 0.87
PNKP-206ENST00000595792 SMIM10L2AP0DMW4 78 aa20.49■□□□□ 0.87
PNKP-206ENST00000595792 SMIM10L2BP0DMW5 78 aa20.49■□□□□ 0.87
PNKP-206ENST00000595792 KCNJ6P48051 423 aa20.49■□□□□ 0.87
PNKP-206ENST00000595792 TAP1Q03518 808 aa20.49■□□□□ 0.87
PNKP-206ENST00000595792 APOBRQ0VD83 1088 aa20.49■□□□□ 0.87
PNKP-206ENST00000595792 PCNX4Q63HM2 1172 aa20.49■□□□□ 0.87
PNKP-206ENST00000595792 KRT40Q6A162 431 aa20.49■□□□□ 0.87
PNKP-206ENST00000595792 CNKSR3Q6P9H4 555 aa20.49■□□□□ 0.87
PNKP-206ENST00000595792 METTL7BQ6UX53 244 aa20.49■□□□□ 0.87
PNKP-206ENST00000595792 Q6ZUG5 572 aa20.49■□□□□ 0.87
PNKP-206ENST00000595792 PHOSPHO2Q8TCD6 241 aa20.49■□□□□ 0.87
PNKP-206ENST00000595792 GPR20Q99678 358 aa20.49■□□□□ 0.87
PNKP-206ENST00000595792 TUT1Q9H6E5 874 aaKnown RBP20.49■□□□□ 0.87
PNKP-206ENST00000595792 PPP4R2Q9NY27 417 aa20.49■□□□□ 0.87
PNKP-206ENST00000595792 C17orf102A2RUQ5 167 aa20.48■□□□□ 0.87
PNKP-206ENST00000595792 GOLGA8AA7E2F4 631 aa20.48■□□□□ 0.87
PNKP-206ENST00000595792 GOLGA8BA8MQT2 603 aa20.48■□□□□ 0.87
PNKP-206ENST00000595792 TREHO43280 583 aa20.48■□□□□ 0.87
PNKP-206ENST00000595792 STAM2O75886 525 aa20.48■□□□□ 0.87
PNKP-206ENST00000595792 UTP14CQ5TAP6 766 aaKnown RBP20.48■□□□□ 0.87
PNKP-206ENST00000595792 SYNE3Q6ZMZ3 975 aa20.48■□□□□ 0.87
PNKP-206ENST00000595792 HEATR3Q7Z4Q2 680 aa20.48■□□□□ 0.87
PNKP-206ENST00000595792 SERINC5Q86VE9 423 aa20.48■□□□□ 0.87
PNKP-206ENST00000595792 ARNTL2Q8WYA1 636 aa20.48■□□□□ 0.87
PNKP-206ENST00000595792 OSBPL7Q9BZF2 842 aa20.48■□□□□ 0.87
PNKP-206ENST00000595792 PSTPIP2Q9H939 334 aa20.48■□□□□ 0.87
PNKP-206ENST00000595792 RBM28Q9NW13 759 aaKnown RBP20.48■□□□□ 0.87
PNKP-206ENST00000595792 XIRP2A4UGR9 3374 aa20.48■□□□□ 0.87
PNKP-206ENST00000595792 TLL1O43897 1013 aa20.47■□□□□ 0.87
PNKP-206ENST00000595792 HMGB1P09429 215 aaKnown RBP20.47■□□□□ 0.87
PNKP-206ENST00000595792 ADD1P35611 737 aaKnown RBP20.47■□□□□ 0.87
PNKP-206ENST00000595792 THPOP40225 353 aa20.47■□□□□ 0.87
PNKP-206ENST00000595792 NEDD9Q14511 834 aa20.47■□□□□ 0.87
PNKP-206ENST00000595792 BRF1Q92994 677 aa20.47■□□□□ 0.87
PNKP-206ENST00000595792 ATP6V0A1Q93050 837 aa20.47■□□□□ 0.87
PNKP-206ENST00000595792 AGXT2Q9BYV1 514 aa20.47■□□□□ 0.87
PNKP-206ENST00000595792 PKD2L1Q9P0L9 805 aa20.47■□□□□ 0.87
PNKP-206ENST00000595792 V9GY48 417 aaPredicted RBP20.47■□□□□ 0.87
PNKP-206ENST00000595792 TRANK1O15050 2925 aa20.47■□□□□ 0.87
PNKP-206ENST00000595792 ADAMTS3O15072 1205 aa20.46■□□□□ 0.87
PNKP-206ENST00000595792 ATP9AO75110 1047 aa20.46■□□□□ 0.87
PNKP-206ENST00000595792 REC8O95072 547 aa20.46■□□□□ 0.87
PNKP-206ENST00000595792 CTSHP09668 335 aa20.46■□□□□ 0.87
PNKP-206ENST00000595792 RPS6KB1P23443 525 aa20.46■□□□□ 0.87
PNKP-206ENST00000595792 HOXC8P31273 242 aa20.46■□□□□ 0.87
PNKP-206ENST00000595792 FAM117BQ6P1L5 589 aa20.46■□□□□ 0.87
PNKP-206ENST00000595792 BLOC1S2Q6QNY1 142 aa20.46■□□□□ 0.87
PNKP-206ENST00000595792 USP26Q9BXU7 913 aa20.46■□□□□ 0.87
PNKP-206ENST00000595792 RNPEPQ9H4A4 650 aa20.46■□□□□ 0.87
PNKP-206ENST00000595792 SETD4Q9NVD3 440 aa20.46■□□□□ 0.87
PNKP-206ENST00000595792 THEGQ9P2T0 379 aa20.46■□□□□ 0.87
PNKP-206ENST00000595792 NID2Q14112 1375 aa20.46■□□□□ 0.87
PNKP-206ENST00000595792 STXBP3O00186 592 aa20.45■□□□□ 0.86
PNKP-206ENST00000595792 ITGB5P18084 799 aa20.45■□□□□ 0.86
PNKP-206ENST00000595792 TJAP1Q5JTD0 557 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms