RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 TTYH1Q9H313 450 aaPredicted RBP18.37■□□□□ 0.53
IRF3-210ENST00000595240 SEMA6BQ9H3T3 888 aa18.37■□□□□ 0.53
IRF3-210ENST00000595240 TMEM265A0A087WTH1 108 aa18.36■□□□□ 0.53
IRF3-210ENST00000595240 SMCO2A6NFE2 343 aa18.36■□□□□ 0.53
IRF3-210ENST00000595240 H3BRB1 525 aa18.36■□□□□ 0.53
IRF3-210ENST00000595240 LGALS2P05162 132 aa18.36■□□□□ 0.53
IRF3-210ENST00000595240 COL6A3P12111 3177 aa18.36■□□□□ 0.53
IRF3-210ENST00000595240 SCG2P13521 617 aa18.36■□□□□ 0.53
IRF3-210ENST00000595240 KCNA2P16389 499 aa18.36■□□□□ 0.53
IRF3-210ENST00000595240 DNAJB2P25686 324 aa18.36■□□□□ 0.53
IRF3-210ENST00000595240 CCDC155Q8N6L0 562 aa18.36■□□□□ 0.53
IRF3-210ENST00000595240 GIMAP8Q8ND71 665 aaPredicted RBP18.36■□□□□ 0.53
IRF3-210ENST00000595240 AFAP1L1Q8TED9 768 aa18.36■□□□□ 0.53
IRF3-210ENST00000595240 TM6SF1Q9BZW5 370 aa18.36■□□□□ 0.53
IRF3-210ENST00000595240 GLT8D2Q9H1C3 349 aa18.36■□□□□ 0.53
IRF3-210ENST00000595240 TUT1Q9H6E5 874 aaKnown RBP18.36■□□□□ 0.53
IRF3-210ENST00000595240 EHMT1Q9H9B1 1298 aa18.36■□□□□ 0.53
IRF3-210ENST00000595240 JADE2Q9NQC1 790 aa18.36■□□□□ 0.53
IRF3-210ENST00000595240 TELO2Q9Y4R8 837 aa18.36■□□□□ 0.53
IRF3-210ENST00000595240 ATP9AO75110 1047 aa18.35■□□□□ 0.53
IRF3-210ENST00000595240 FOSP01100 380 aaPredicted RBP18.35■□□□□ 0.53
IRF3-210ENST00000595240 PDIA3P30101 505 aaKnown RBP18.35■□□□□ 0.53
IRF3-210ENST00000595240 HOXC8P31273 242 aa18.35■□□□□ 0.53
IRF3-210ENST00000595240 CLK2P49760 499 aaKnown RBP18.35■□□□□ 0.53
IRF3-210ENST00000595240 MTMR1Q13613 665 aa18.35■□□□□ 0.53
IRF3-210ENST00000595240 TOB2Q14106 344 aaPredicted RBP18.35■□□□□ 0.53
IRF3-210ENST00000595240 HIC1Q14526 733 aa18.35■□□□□ 0.53
IRF3-210ENST00000595240 DEFB128Q7Z7B8 93 aa18.35■□□□□ 0.53
IRF3-210ENST00000595240 CYP46A1Q9Y6A2 500 aa18.35■□□□□ 0.53
IRF3-210ENST00000595240 GRXCR1A8MXD5 290 aa18.34■□□□□ 0.53
IRF3-210ENST00000595240 MAFGO15525 162 aa18.34■□□□□ 0.53
IRF3-210ENST00000595240 PRPF3O43395 683 aaKnown RBP18.34■□□□□ 0.53
IRF3-210ENST00000595240 ZNF200P98182 395 aaPredicted RBP18.34■□□□□ 0.53
IRF3-210ENST00000595240 PTK7Q13308 1070 aa18.34■□□□□ 0.53
IRF3-210ENST00000595240 AP3B2Q13367 1082 aa18.34■□□□□ 0.53
IRF3-210ENST00000595240 NTRK3Q16288 839 aa18.34■□□□□ 0.53
IRF3-210ENST00000595240 PKN1Q16512 942 aa18.34■□□□□ 0.53
IRF3-210ENST00000595240 TRIM71Q2Q1W2 868 aaKnown RBP18.34■□□□□ 0.53
IRF3-210ENST00000595240 TIFAQ96CG3 184 aa18.34■□□□□ 0.53
IRF3-210ENST00000595240 ANO3Q9BYT9 981 aa18.34■□□□□ 0.53
IRF3-210ENST00000595240 PBX4Q9BYU1 374 aa18.34■□□□□ 0.53
IRF3-210ENST00000595240 MYH7BA7E2Y1 1941 aa18.33■□□□□ 0.53
IRF3-210ENST00000595240 ESYT2A0FGR8 921 aa18.33■□□□□ 0.52
IRF3-210ENST00000595240 CKBP12277 381 aa18.33■□□□□ 0.52
IRF3-210ENST00000595240 SELPP16109 830 aa18.33■□□□□ 0.52
IRF3-210ENST00000595240 IFNAR1P17181 557 aa18.33■□□□□ 0.52
IRF3-210ENST00000595240 SREBF1P36956 1147 aa18.33■□□□□ 0.52
IRF3-210ENST00000595240 PBX2P40425 430 aa18.33■□□□□ 0.52
IRF3-210ENST00000595240 SP4Q02446 784 aa18.33■□□□□ 0.52
IRF3-210ENST00000595240 GPNMBQ14956 572 aa18.33■□□□□ 0.52
IRF3-210ENST00000595240 LRRC8DQ7L1W4 858 aa18.33■□□□□ 0.52
IRF3-210ENST00000595240 TRIM50Q86XT4 487 aa18.33■□□□□ 0.52
IRF3-210ENST00000595240 WNT8BQ93098 351 aa18.33■□□□□ 0.52
IRF3-210ENST00000595240 PHKBQ93100 1093 aa18.33■□□□□ 0.52
IRF3-210ENST00000595240 PGBD1Q96JS3 809 aa18.33■□□□□ 0.52
IRF3-210ENST00000595240 CDX2Q99626 313 aaPredicted RBP18.33■□□□□ 0.52
IRF3-210ENST00000595240 MXRA8Q9BRK3 442 aa18.33■□□□□ 0.52
IRF3-210ENST00000595240 UPF3BQ9BZI7 483 aaKnown RBP18.33■□□□□ 0.52
IRF3-210ENST00000595240 ZMYND12Q9H0C1 365 aa18.33■□□□□ 0.52
IRF3-210ENST00000595240 TMEM260Q9NX78 707 aa18.33■□□□□ 0.52
IRF3-210ENST00000595240 SMIM10L2AP0DMW4 78 aa18.32■□□□□ 0.52
IRF3-210ENST00000595240 SMIM10L2BP0DMW5 78 aa18.32■□□□□ 0.52
IRF3-210ENST00000595240 SERINC5Q86VE9 423 aa18.32■□□□□ 0.52
IRF3-210ENST00000595240 CYP2W1Q8TAV3 490 aa18.32■□□□□ 0.52
IRF3-210ENST00000595240 RNF26Q9BY78 433 aaPredicted RBP18.32■□□□□ 0.52
IRF3-210ENST00000595240 NCOA5Q9HCD5 579 aaKnown RBP18.32■□□□□ 0.52
IRF3-210ENST00000595240 KCNH7Q9NS40 1196 aa18.32■□□□□ 0.52
IRF3-210ENST00000595240 ZNF215Q9UL58 517 aaPredicted RBP18.32■□□□□ 0.52
IRF3-210ENST00000595240 SLC4A7Q9Y6M7 1214 aa18.32■□□□□ 0.52
IRF3-210ENST00000595240 C17orf102A2RUQ5 167 aa18.31■□□□□ 0.52
IRF3-210ENST00000595240 PARNO95453 639 aaKnown RBP18.31■□□□□ 0.52
IRF3-210ENST00000595240 ACTN1P12814 892 aa18.31■□□□□ 0.52
IRF3-210ENST00000595240 CCT2P78371 535 aaKnown RBP18.31■□□□□ 0.52
IRF3-210ENST00000595240 CEP55Q53EZ4 464 aa18.31■□□□□ 0.52
IRF3-210ENST00000595240 UTP14CQ5TAP6 766 aaKnown RBP18.31■□□□□ 0.52
IRF3-210ENST00000595240 TRAF7Q6Q0C0 670 aa18.31■□□□□ 0.52
IRF3-210ENST00000595240 CCDC12Q8WUD4 166 aaPredicted RBP18.31■□□□□ 0.52
IRF3-210ENST00000595240 ZNF274Q96GC6 653 aaPredicted RBP18.31■□□□□ 0.52
IRF3-210ENST00000595240 PKD2L1Q9P0L9 805 aa18.31■□□□□ 0.52
IRF3-210ENST00000595240 CDH23Q9H251 3354 aa18.31■□□□□ 0.52
IRF3-210ENST00000595240 TANC1Q9C0D5 1861 aa18.31■□□□□ 0.52
IRF3-210ENST00000595240 GSTTP1A0A1W2PQM5 241 aa18.3■□□□□ 0.52
IRF3-210ENST00000595240 ZBBXA8MT70 800 aa18.3■□□□□ 0.52
IRF3-210ENST00000595240 MEIS1O00470 390 aa18.3■□□□□ 0.52
IRF3-210ENST00000595240 ADAMTS3O15072 1205 aa18.3■□□□□ 0.52
IRF3-210ENST00000595240 CXCL10P02778 98 aa18.3■□□□□ 0.52
IRF3-210ENST00000595240 TCF7P36402 384 aaPredicted RBP18.3■□□□□ 0.52
IRF3-210ENST00000595240 ARHGAP4P98171 946 aa18.3■□□□□ 0.52
IRF3-210ENST00000595240 AKAP17AQ02040 695 aaKnown RBP18.3■□□□□ 0.52
IRF3-210ENST00000595240 RAB30Q15771 203 aa18.3■□□□□ 0.52
IRF3-210ENST00000595240 JAKMIP3Q5VZ66 844 aa18.3■□□□□ 0.52
IRF3-210ENST00000595240 MCTP2Q6DN12 878 aa18.3■□□□□ 0.52
IRF3-210ENST00000595240 CRYGNQ8WXF5 182 aa18.3■□□□□ 0.52
IRF3-210ENST00000595240 SEPT1Q8WYJ6 367 aa18.3■□□□□ 0.52
IRF3-210ENST00000595240 ATP6V0A1Q93050 837 aa18.3■□□□□ 0.52
IRF3-210ENST00000595240 SLC26A6Q9BXS9 759 aa18.3■□□□□ 0.52
IRF3-210ENST00000595240 FTOQ9C0B1 505 aaKnown RBP eCLIP18.3■□□□□ 0.52
IRF3-210ENST00000595240 RNPEPQ9H4A4 650 aa18.3■□□□□ 0.52
IRF3-210ENST00000595240 ZNF576Q9H609 170 aa18.3■□□□□ 0.52
IRF3-210ENST00000595240 C6orf50Q9HD87 102 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms