RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 GIMAP8Q8ND71 665 aaPredicted RBP26.94■■□□□ 1.9
LSM4-204ENST00000594828 GPRASP2Q96D09 838 aa26.94■■□□□ 1.9
LSM4-204ENST00000594828 CDHR1Q96JP9 859 aa26.94■■□□□ 1.9
LSM4-204ENST00000594828 JAKMIP1Q96N16 626 aaKnown RBP26.94■■□□□ 1.9
LSM4-204ENST00000594828 YBX2Q9Y2T7 364 aaKnown RBP26.94■■□□□ 1.9
LSM4-204ENST00000594828 SNX14Q9Y5W7 946 aa26.94■■□□□ 1.9
LSM4-204ENST00000594828 TRIP12Q14669 1992 aaPredicted RBP26.93■■□□□ 1.9
LSM4-204ENST00000594828 REC8O95072 547 aa26.93■■□□□ 1.9
LSM4-204ENST00000594828 RCAN1P53805 252 aa26.93■■□□□ 1.9
LSM4-204ENST00000594828 NAPAP54920 295 aa26.93■■□□□ 1.9
LSM4-204ENST00000594828 HIC1Q14526 733 aa26.93■■□□□ 1.9
LSM4-204ENST00000594828 FAM217BQ9NTX9 383 aaPredicted RBP26.93■■□□□ 1.9
LSM4-204ENST00000594828 PCDHA11Q9Y5I1 949 aa26.93■■□□□ 1.9
LSM4-204ENST00000594828 TANC1Q9C0D5 1861 aa26.92■■□□□ 1.9
LSM4-204ENST00000594828 ITGB5P18084 799 aa26.92■■□□□ 1.9
LSM4-204ENST00000594828 CDC27P30260 824 aa26.92■■□□□ 1.9
LSM4-204ENST00000594828 GPNMBQ14956 572 aa26.92■■□□□ 1.9
LSM4-204ENST00000594828 BLOC1S2Q6QNY1 142 aa26.92■■□□□ 1.9
LSM4-204ENST00000594828 Q6ZUG5 572 aa26.92■■□□□ 1.9
LSM4-204ENST00000594828 EHMT1Q9H9B1 1298 aa26.92■■□□□ 1.9
LSM4-204ENST00000594828 RIC8AQ9NPQ8 531 aa26.92■■□□□ 1.9
LSM4-204ENST00000594828 UBIAD1Q9Y5Z9 338 aa26.92■■□□□ 1.9
LSM4-204ENST00000594828 C17orf102A2RUQ5 167 aa26.91■■□□□ 1.9
LSM4-204ENST00000594828 SMIM10L2AP0DMW4 78 aa26.91■■□□□ 1.9
LSM4-204ENST00000594828 SMIM10L2BP0DMW5 78 aa26.91■■□□□ 1.9
LSM4-204ENST00000594828 SP4Q02446 784 aa26.91■■□□□ 1.9
LSM4-204ENST00000594828 TRIM71Q2Q1W2 868 aaKnown RBP26.91■■□□□ 1.9
LSM4-204ENST00000594828 TYW1BQ6NUM6 668 aa26.91■■□□□ 1.9
LSM4-204ENST00000594828 PPP1R18Q6NYC8 613 aa26.91■■□□□ 1.9
LSM4-204ENST00000594828 TEX2Q8IWB9 1127 aa26.91■■□□□ 1.9
LSM4-204ENST00000594828 PHOSPHO2Q8TCD6 241 aa26.91■■□□□ 1.9
LSM4-204ENST00000594828 SLC9A7Q96T83 725 aa26.91■■□□□ 1.9
LSM4-204ENST00000594828 RNPEPQ9H4A4 650 aa26.91■■□□□ 1.9
LSM4-204ENST00000594828 TELO2Q9Y4R8 837 aa26.91■■□□□ 1.9
LSM4-204ENST00000594828 CCDC196A0A1B0GTZ2 297 aa26.9■■□□□ 1.9
LSM4-204ENST00000594828 hCG_1984214I3L0E3 225 aa26.9■■□□□ 1.9
LSM4-204ENST00000594828 ATP9AO75110 1047 aa26.9■■□□□ 1.9
LSM4-204ENST00000594828 BAIAP3O94812 1187 aa26.9■■□□□ 1.9
LSM4-204ENST00000594828 MYOGP15173 224 aa26.9■■□□□ 1.9
LSM4-204ENST00000594828 ADD1P35611 737 aaKnown RBP26.9■■□□□ 1.9
LSM4-204ENST00000594828 METAP2P50579 478 aaKnown RBP eCLIP26.9■■□□□ 1.9
LSM4-204ENST00000594828 APOBRQ0VD83 1088 aa26.9■■□□□ 1.9
LSM4-204ENST00000594828 ZNF618Q5T7W0 954 aa26.9■■□□□ 1.9
LSM4-204ENST00000594828 UTP14CQ5TAP6 766 aaKnown RBP26.9■■□□□ 1.9
LSM4-204ENST00000594828 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.9■■□□□ 1.9
LSM4-204ENST00000594828 ZNF713Q8N859 430 aaPredicted RBP26.9■■□□□ 1.9
LSM4-204ENST00000594828 ATP6V0A1Q93050 837 aa26.9■■□□□ 1.9
LSM4-204ENST00000594828 WNT8BQ93098 351 aa26.9■■□□□ 1.9
LSM4-204ENST00000594828 GAS2L1Q99501 681 aaPredicted RBP26.9■■□□□ 1.9
LSM4-204ENST00000594828 PRDM12Q9H4Q4 367 aa26.9■■□□□ 1.9
LSM4-204ENST00000594828 ZNF215Q9UL58 517 aaPredicted RBP26.9■■□□□ 1.9
LSM4-204ENST00000594828 STXBP3O00186 592 aa26.89■■□□□ 1.9
LSM4-204ENST00000594828 DLL1O00548 723 aa26.89■■□□□ 1.9
LSM4-204ENST00000594828 MAFGO15525 162 aa26.89■■□□□ 1.9
LSM4-204ENST00000594828 NBNO60934 754 aa26.89■■□□□ 1.9
LSM4-204ENST00000594828 CXCL10P02778 98 aa26.89■■□□□ 1.9
LSM4-204ENST00000594828 KCNA2P16389 499 aa26.89■■□□□ 1.9
LSM4-204ENST00000594828 MTMR1Q13613 665 aa26.89■■□□□ 1.9
LSM4-204ENST00000594828 SERINC5Q86VE9 423 aa26.89■■□□□ 1.9
LSM4-204ENST00000594828 BRF1Q92994 677 aa26.89■■□□□ 1.9
LSM4-204ENST00000594828 JADE2Q9NQC1 790 aa26.89■■□□□ 1.9
LSM4-204ENST00000594828 BARHL2Q9NY43 387 aa26.89■■□□□ 1.9
LSM4-204ENST00000594828 SMCO2A6NFE2 343 aa26.88■■□□□ 1.89
LSM4-204ENST00000594828 FOSP01100 380 aaPredicted RBP26.88■■□□□ 1.89
LSM4-204ENST00000594828 PSMA5P28066 241 aa26.88■■□□□ 1.89
LSM4-204ENST00000594828 HOXC8P31273 242 aa26.88■■□□□ 1.89
LSM4-204ENST00000594828 ADCY7P51828 1080 aa26.88■■□□□ 1.89
LSM4-204ENST00000594828 PPP2R2DQ66LE6 453 aa26.88■■□□□ 1.89
LSM4-204ENST00000594828 TRIM50Q86XT4 487 aa26.88■■□□□ 1.89
LSM4-204ENST00000594828 GBF1Q92538 1859 aa26.87■■□□□ 1.89
LSM4-204ENST00000594828 DOCK5Q9H7D0 1870 aa26.87■■□□□ 1.89
LSM4-204ENST00000594828 GNAT1P11488 350 aa26.87■■□□□ 1.89
LSM4-204ENST00000594828 RPS6KB1P23443 525 aa26.87■■□□□ 1.89
LSM4-204ENST00000594828 THPOP40225 353 aa26.87■■□□□ 1.89
LSM4-204ENST00000594828 KCNJ6P48051 423 aa26.87■■□□□ 1.89
LSM4-204ENST00000594828 CNKSR3Q6P9H4 555 aa26.87■■□□□ 1.89
LSM4-204ENST00000594828 TRAF7Q6Q0C0 670 aa26.87■■□□□ 1.89
LSM4-204ENST00000594828 FBXL16Q8N461 479 aa26.87■■□□□ 1.89
LSM4-204ENST00000594828 GLT8D2Q9H1C3 349 aa26.87■■□□□ 1.89
LSM4-204ENST00000594828 SETD4Q9NVD3 440 aa26.87■■□□□ 1.89
LSM4-204ENST00000594828 PKD2L1Q9P0L9 805 aa26.87■■□□□ 1.89
LSM4-204ENST00000594828 KIF28PB7ZC32 967 aa26.86■■□□□ 1.89
LSM4-204ENST00000594828 TREHO43280 583 aa26.86■■□□□ 1.89
LSM4-204ENST00000594828 TCF7P36402 384 aaPredicted RBP26.86■■□□□ 1.89
LSM4-204ENST00000594828 HERC6Q8IVU3 1022 aa26.86■■□□□ 1.89
LSM4-204ENST00000594828 SEPT1Q8WYJ6 367 aa26.86■■□□□ 1.89
LSM4-204ENST00000594828 MXRA8Q9BRK3 442 aa26.86■■□□□ 1.89
LSM4-204ENST00000594828 TET1Q8NFU7 2136 aa26.86■■□□□ 1.89
LSM4-204ENST00000594828 RSPH10B2B2RC85 870 aa26.85■■□□□ 1.89
LSM4-204ENST00000594828 RSPH10BP0C881 870 aa26.85■■□□□ 1.89
LSM4-204ENST00000594828 PGBD1Q96JS3 809 aa26.85■■□□□ 1.89
LSM4-204ENST00000594828 ANO3Q9BYT9 981 aa26.85■■□□□ 1.89
LSM4-204ENST00000594828 ABHD14A-ACY1A0A1B0GW23 586 aa26.84■■□□□ 1.89
LSM4-204ENST00000594828 GSTTP1A0A1W2PQM5 241 aa26.84■■□□□ 1.89
LSM4-204ENST00000594828 EPB41L2O43491 1005 aaKnown RBP26.84■■□□□ 1.89
LSM4-204ENST00000594828 CA3P07451 260 aa26.84■■□□□ 1.89
LSM4-204ENST00000594828 WDR5P61964 334 aaKnown RBP26.84■■□□□ 1.89
LSM4-204ENST00000594828 PFKFB3Q16875 520 aaPredicted RBP26.84■■□□□ 1.89
LSM4-204ENST00000594828 AGXT2Q9BYV1 514 aa26.84■■□□□ 1.89
LSM4-204ENST00000594828 KCNH7Q9NS40 1196 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms