RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 TLR2O60603 784 aa18.2■□□□□ 0.5
LIG1-206ENST00000594067 NOL4O94818 638 aa18.2■□□□□ 0.5
LIG1-206ENST00000594067 DNA2P51530 1060 aa18.2■□□□□ 0.5
LIG1-206ENST00000594067 GABPAQ06546 454 aa18.2■□□□□ 0.5
LIG1-206ENST00000594067 PROM2Q8N271 834 aa18.2■□□□□ 0.5
LIG1-206ENST00000594067 TBC1D16Q8TBP0 767 aa18.2■□□□□ 0.5
LIG1-206ENST00000594067 NOX5Q96PH1 765 aa18.2■□□□□ 0.5
LIG1-206ENST00000594067 PCDHA12Q9UN75 941 aa18.2■□□□□ 0.5
LIG1-206ENST00000594067 SSU72P8A0A1W2PR75 194 aa18.19■□□□□ 0.5
LIG1-206ENST00000594067 PAFAH1B1P43034 410 aa18.19■□□□□ 0.5
LIG1-206ENST00000594067 POLR2FP61218 127 aaKnown RBP18.19■□□□□ 0.5
LIG1-206ENST00000594067 FAM83BQ5T0W9 1011 aa18.19■□□□□ 0.5
LIG1-206ENST00000594067 HAUS3Q68CZ6 603 aa18.19■□□□□ 0.5
LIG1-206ENST00000594067 KCTD1Q719H9 257 aa18.19■□□□□ 0.5
LIG1-206ENST00000594067 CUL5Q93034 780 aa18.19■□□□□ 0.5
LIG1-206ENST00000594067 CAPS2Q9BXY5 557 aa18.19■□□□□ 0.5
LIG1-206ENST00000594067 DDX4Q9NQI0 724 aaKnown RBP18.19■□□□□ 0.5
LIG1-206ENST00000594067 GRIN2DO15399 1336 aa18.19■□□□□ 0.5
LIG1-206ENST00000594067 IGKV6D-41A0A0C4DH26 115 aa18.19■□□□□ 0.5
LIG1-206ENST00000594067 USP17L10C9JJH3 530 aa18.19■□□□□ 0.5
LIG1-206ENST00000594067 CLK2P49760 499 aaKnown RBP18.19■□□□□ 0.5
LIG1-206ENST00000594067 GTF2A1P52655 376 aaPredicted RBP18.19■□□□□ 0.5
LIG1-206ENST00000594067 VPS72Q15906 364 aa18.19■□□□□ 0.5
LIG1-206ENST00000594067 SLC9C1Q4G0N8 1177 aa18.19■□□□□ 0.5
LIG1-206ENST00000594067 SFMBT2Q5VUG0 894 aa18.19■□□□□ 0.5
LIG1-206ENST00000594067 TBC1D22AQ8WUA7 517 aa18.19■□□□□ 0.5
LIG1-206ENST00000594067 EDEM3Q9BZQ6 932 aa18.19■□□□□ 0.5
LIG1-206ENST00000594067 RBM12Q9NTZ6 932 aaKnown RBP18.19■□□□□ 0.5
LIG1-206ENST00000594067 CEP72Q9P209 647 aa18.19■□□□□ 0.5
LIG1-206ENST00000594067 PLIN4Q96Q06 1357 aa18.19■□□□□ 0.5
LIG1-206ENST00000594067 TTLL1O95922 423 aa18.18■□□□□ 0.5
LIG1-206ENST00000594067 SLURP2P0DP57 97 aa18.18■□□□□ 0.5
LIG1-206ENST00000594067 ENOX2Q16206 610 aaKnown RBP18.18■□□□□ 0.5
LIG1-206ENST00000594067 RUBCNQ92622 972 aa18.18■□□□□ 0.5
LIG1-206ENST00000594067 BMP2KQ9NSY1 1161 aaPredicted RBP18.18■□□□□ 0.5
LIG1-206ENST00000594067 KIAA1024Q9UPX6 916 aa18.18■□□□□ 0.5
LIG1-206ENST00000594067 BTAF1O14981 1849 aa18.18■□□□□ 0.5
LIG1-206ENST00000594067 RIMBP2O15034 1052 aa18.18■□□□□ 0.5
LIG1-206ENST00000594067 ARID5AQ03989 594 aa18.18■□□□□ 0.5
LIG1-206ENST00000594067 BCAS4Q8TDM0 211 aa18.18■□□□□ 0.5
LIG1-206ENST00000594067 RBM17Q96I25 401 aaKnown RBP18.18■□□□□ 0.5
LIG1-206ENST00000594067 FAM107BQ9H098 131 aa18.18■□□□□ 0.5
LIG1-206ENST00000594067 STIM2Q9P246 746 aa18.18■□□□□ 0.5
LIG1-206ENST00000594067 GOLGA8KD6RF30 607 aa18.17■□□□□ 0.5
LIG1-206ENST00000594067 EBAG9O00559 213 aa18.17■□□□□ 0.5
LIG1-206ENST00000594067 EIF3HO15372 352 aaKnown RBP eCLIP18.17■□□□□ 0.5
LIG1-206ENST00000594067 PDE4CQ08493 712 aa18.17■□□□□ 0.5
LIG1-206ENST00000594067 PPP1R18Q6NYC8 613 aa18.17■□□□□ 0.5
LIG1-206ENST00000594067 GBP6Q6ZN66 633 aa18.17■□□□□ 0.5
LIG1-206ENST00000594067 MICALL1Q8N3F8 863 aa18.17■□□□□ 0.5
LIG1-206ENST00000594067 PSTPIP2Q9H939 334 aa18.17■□□□□ 0.5
LIG1-206ENST00000594067 POTEB3A0JP26 581 aa18.17■□□□□ 0.5
LIG1-206ENST00000594067 POTECB2RU33 542 aa18.17■□□□□ 0.5
LIG1-206ENST00000594067 MPHOSPH10O00566 681 aaKnown RBP18.17■□□□□ 0.5
LIG1-206ENST00000594067 SERPING1P05155 500 aa18.17■□□□□ 0.5
LIG1-206ENST00000594067 MRPL12P52815 198 aaKnown RBP18.17■□□□□ 0.5
LIG1-206ENST00000594067 CRY2Q49AN0 593 aa18.17■□□□□ 0.5
LIG1-206ENST00000594067 HERC4Q5GLZ8 1057 aaPredicted RBP18.17■□□□□ 0.5
LIG1-206ENST00000594067 C8orf74Q6P047 294 aa18.17■□□□□ 0.5
LIG1-206ENST00000594067 POTEBQ6S5H4 581 aa18.17■□□□□ 0.5
LIG1-206ENST00000594067 TSEN2Q8NCE0 465 aaKnown RBP18.17■□□□□ 0.5
LIG1-206ENST00000594067 TBC1D5Q92609 795 aa18.17■□□□□ 0.5
LIG1-206ENST00000594067 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.17■□□□□ 0.5
LIG1-206ENST00000594067 FAM169AQ9Y6X4 670 aa18.17■□□□□ 0.5
LIG1-206ENST00000594067 PALMO75781 387 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 FTCDO95954 541 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 PLA2G4BP0C869 781 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 SEPT2Q15019 361 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 GPBP1Q86WP2 473 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 RNF10Q8N5U6 811 aaKnown RBP18.16■□□□□ 0.5
LIG1-206ENST00000594067 CERKQ8TCT0 537 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 ZHX3Q9H4I2 956 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 USP17L15C9J2P7 530 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 USP17L13C9JLJ4 530 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 USP17L11C9JVI0 530 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 USP17L18D6R9N7 530 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 USP17L22D6RA61 530 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 USP17L17D6RBQ6 530 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 USP17L19D6RCP7 530 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 USP17L20D6RJB6 530 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 RBAK-RBAKDNI3L0D1 243 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 RAD21O60216 631 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 GNGT1P63211 74 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 USP17L24Q0WX57 530 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 RAPGEF1Q13905 1077 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 USP17L6PQ6QN14 398 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 CCDC65Q8IXS2 484 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 ARL8AQ96BM9 186 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.16■□□□□ 0.5
LIG1-206ENST00000594067 RABEP2Q9H5N1 569 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 SERPINB13Q9UIV8 391 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.16■□□□□ 0.5
LIG1-206ENST00000594067 ZBTB5O15062 677 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 OPA1O60313 960 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 SERPINB2P05120 415 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 EPB41P11171 864 aaKnown RBP18.16■□□□□ 0.5
LIG1-206ENST00000594067 GUCY2CP25092 1073 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 KLRC1P26715 233 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 STAT3P40763 770 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 EPHB4P54760 987 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms