RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 RSPH10BP0C881 870 aa26.16■■□□□ 1.78
SSBP4-203ENST00000593641 FAM117BQ6P1L5 589 aa26.16■■□□□ 1.78
SSBP4-203ENST00000593641 METTL7BQ6UX53 244 aa26.16■■□□□ 1.78
SSBP4-203ENST00000593641 CTCFLQ8NI51 663 aaPredicted RBP26.16■■□□□ 1.78
SSBP4-203ENST00000593641 HLA-CQ95604 372 aa26.16■■□□□ 1.78
SSBP4-203ENST00000593641 TGS1Q96RS0 853 aaKnown RBP26.16■■□□□ 1.78
SSBP4-203ENST00000593641 MTUS1Q9ULD2 1270 aa26.16■■□□□ 1.78
SSBP4-203ENST00000593641 SUPT16HQ9Y5B9 1047 aaKnown RBP26.16■■□□□ 1.78
SSBP4-203ENST00000593641 LPXNO60711 386 aa26.15■■□□□ 1.78
SSBP4-203ENST00000593641 SMIM10L2AP0DMW4 78 aa26.15■■□□□ 1.78
SSBP4-203ENST00000593641 SMIM10L2BP0DMW5 78 aa26.15■■□□□ 1.78
SSBP4-203ENST00000593641 ICAM3P32942 547 aa26.15■■□□□ 1.78
SSBP4-203ENST00000593641 MRPS9P82933 396 aaKnown RBP26.15■■□□□ 1.78
SSBP4-203ENST00000593641 SMARCC2Q8TAQ2 1214 aa26.15■■□□□ 1.78
SSBP4-203ENST00000593641 CUL5Q93034 780 aa26.15■■□□□ 1.78
SSBP4-203ENST00000593641 INPP4AQ96PE3 977 aaPredicted RBP26.15■■□□□ 1.78
SSBP4-203ENST00000593641 USP26Q9BXU7 913 aa26.15■■□□□ 1.78
SSBP4-203ENST00000593641 LMCD1Q9NZU5 365 aa26.15■■□□□ 1.78
SSBP4-203ENST00000593641 FIBPO43427 364 aa26.14■■□□□ 1.78
SSBP4-203ENST00000593641 AMHP03971 560 aa26.14■■□□□ 1.78
SSBP4-203ENST00000593641 COL9A1P20849 921 aa26.14■■□□□ 1.78
SSBP4-203ENST00000593641 KIF5BP33176 963 aa26.14■■□□□ 1.78
SSBP4-203ENST00000593641 MB21D2Q8IYB1 491 aaPredicted RBP26.14■■□□□ 1.78
SSBP4-203ENST00000593641 DBF4BQ8NFT6 615 aa26.14■■□□□ 1.78
SSBP4-203ENST00000593641 IGDCC4Q8TDY8 1250 aa26.14■■□□□ 1.78
SSBP4-203ENST00000593641 RRP36Q96EU6 259 aaKnown RBP26.14■■□□□ 1.78
SSBP4-203ENST00000593641 MAP3K14Q99558 947 aa26.14■■□□□ 1.78
SSBP4-203ENST00000593641 SEC63Q9UGP8 760 aaKnown RBP26.14■■□□□ 1.78
SSBP4-203ENST00000593641 INSL6Q9Y581 213 aa26.14■■□□□ 1.78
SSBP4-203ENST00000593641 LINC01553A4QN01 128 aa26.13■■□□□ 1.77
SSBP4-203ENST00000593641 DDAH1O94760 285 aa26.13■■□□□ 1.77
SSBP4-203ENST00000593641 HOXC8P31273 242 aa26.13■■□□□ 1.77
SSBP4-203ENST00000593641 ANTXR2P58335 489 aa26.13■■□□□ 1.77
SSBP4-203ENST00000593641 ERVK-21P61565 698 aa26.13■■□□□ 1.77
SSBP4-203ENST00000593641 CASC1Q6TDU7 716 aa26.13■■□□□ 1.77
SSBP4-203ENST00000593641 CYFIP1Q7L576 1253 aa26.13■■□□□ 1.77
SSBP4-203ENST00000593641 ZNF654Q8IZM8 581 aa26.13■■□□□ 1.77
SSBP4-203ENST00000593641 MYOCDQ8IZQ8 938 aa26.13■■□□□ 1.77
SSBP4-203ENST00000593641 MAP4K1Q92918 833 aa26.13■■□□□ 1.77
SSBP4-203ENST00000593641 SPZ1Q9BXG8 430 aa26.13■■□□□ 1.77
SSBP4-203ENST00000593641 RTEL1Q9NZ71 1219 aa26.13■■□□□ 1.77
SSBP4-203ENST00000593641 ZNF215Q9UL58 517 aaPredicted RBP26.13■■□□□ 1.77
SSBP4-203ENST00000593641 SPATA31C2B4DYI2 1134 aa26.12■■□□□ 1.77
SSBP4-203ENST00000593641 TREHO43280 583 aa26.12■■□□□ 1.77
SSBP4-203ENST00000593641 CAND2O75155 1236 aa26.12■■□□□ 1.77
SSBP4-203ENST00000593641 GNAT1P11488 350 aa26.12■■□□□ 1.77
SSBP4-203ENST00000593641 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.12■■□□□ 1.77
SSBP4-203ENST00000593641 GPR20Q99678 358 aa26.12■■□□□ 1.77
SSBP4-203ENST00000593641 RNPEPQ9H4A4 650 aa26.12■■□□□ 1.77
SSBP4-203ENST00000593641 BCAS3Q9H6U6 928 aa26.12■■□□□ 1.77
SSBP4-203ENST00000593641 SUGCTQ9HAC7 445 aa26.12■■□□□ 1.77
SSBP4-203ENST00000593641 RBM8AQ9Y5S9 174 aaKnown RBP26.12■■□□□ 1.77
SSBP4-203ENST00000593641 SEMA3FQ13275 785 aa26.11■■□□□ 1.77
SSBP4-203ENST00000593641 PLEKHG4Q58EX7 1191 aa26.11■■□□□ 1.77
SSBP4-203ENST00000593641 SEPT8Q92599 483 aa26.11■■□□□ 1.77
SSBP4-203ENST00000593641 LZTS2Q9BRK4 669 aa26.11■■□□□ 1.77
SSBP4-203ENST00000593641 MYL10Q9BUA6 226 aa26.11■■□□□ 1.77
SSBP4-203ENST00000593641 LY9Q9HBG7 655 aa26.11■■□□□ 1.77
SSBP4-203ENST00000593641 CTSHP09668 335 aa26.1■■□□□ 1.77
SSBP4-203ENST00000593641 GNAQP50148 359 aa26.1■■□□□ 1.77
SSBP4-203ENST00000593641 PCNX4Q63HM2 1172 aa26.1■■□□□ 1.77
SSBP4-203ENST00000593641 XRRA1Q6P2D8 792 aa26.1■■□□□ 1.77
SSBP4-203ENST00000593641 USP17L6PQ6QN14 398 aa26.1■■□□□ 1.77
SSBP4-203ENST00000593641 NFXL1Q6ZNB6 911 aa26.1■■□□□ 1.77
SSBP4-203ENST00000593641 NLRX1Q86UT6 975 aa26.1■■□□□ 1.77
SSBP4-203ENST00000593641 MTA3Q9BTC8 594 aa26.1■■□□□ 1.77
SSBP4-203ENST00000593641 PIK3CDO00329 1044 aa26.09■■□□□ 1.77
SSBP4-203ENST00000593641 SMARCA1P28370 1054 aa26.09■■□□□ 1.77
SSBP4-203ENST00000593641 SP4Q02446 784 aa26.09■■□□□ 1.77
SSBP4-203ENST00000593641 TRIM50Q86XT4 487 aa26.09■■□□□ 1.77
SSBP4-203ENST00000593641 SENP7Q9BQF6 1050 aa26.09■■□□□ 1.77
SSBP4-203ENST00000593641 PRC1O43663 620 aa26.08■■□□□ 1.77
SSBP4-203ENST00000593641 MKRN4PQ13434 485 aaPredicted RBP26.08■■□□□ 1.77
SSBP4-203ENST00000593641 UTP14CQ5TAP6 766 aaKnown RBP26.08■■□□□ 1.77
SSBP4-203ENST00000593641 GIMAP8Q8ND71 665 aaPredicted RBP26.08■■□□□ 1.77
SSBP4-203ENST00000593641 SETD4Q9NVD3 440 aa26.08■■□□□ 1.77
SSBP4-203ENST00000593641 NLRC5Q86WI3 1866 aa26.07■■□□□ 1.76
SSBP4-203ENST00000593641 CCDC69A6NI79 296 aa26.07■■□□□ 1.76
SSBP4-203ENST00000593641 MEIS2O14770 477 aa26.07■■□□□ 1.76
SSBP4-203ENST00000593641 MCM5P33992 734 aa26.07■■□□□ 1.76
SSBP4-203ENST00000593641 HTRA4P83105 476 aaPredicted RBP26.07■■□□□ 1.76
SSBP4-203ENST00000593641 TMTC2Q8N394 836 aa26.07■■□□□ 1.76
SSBP4-203ENST00000593641 FBXO22Q8NEZ5 403 aa26.07■■□□□ 1.76
SSBP4-203ENST00000593641 C1QTNF1Q9BXJ1 281 aa26.07■■□□□ 1.76
SSBP4-203ENST00000593641 RBAK-RBAKDNI3L0D1 243 aa26.06■■□□□ 1.76
SSBP4-203ENST00000593641 ARHGAP4P98171 946 aa26.06■■□□□ 1.76
SSBP4-203ENST00000593641 CDHR1Q96JP9 859 aa26.06■■□□□ 1.76
SSBP4-203ENST00000593641 TMEM87BQ96K49 555 aa26.06■■□□□ 1.76
SSBP4-203ENST00000593641 YME1L1Q96TA2 773 aa26.06■■□□□ 1.76
SSBP4-203ENST00000593641 C17orf80Q9BSJ5 609 aa26.06■■□□□ 1.76
SSBP4-203ENST00000593641 PLEKHA8P1O95397 391 aa26.05■■□□□ 1.76
SSBP4-203ENST00000593641 CALM1P0DP23 149 aa26.05■■□□□ 1.76
SSBP4-203ENST00000593641 CALM2P0DP24 149 aa26.05■■□□□ 1.76
SSBP4-203ENST00000593641 CALM3P0DP25 149 aa26.05■■□□□ 1.76
SSBP4-203ENST00000593641 IRX6P78412 446 aaPredicted RBP26.05■■□□□ 1.76
SSBP4-203ENST00000593641 SP7Q8TDD2 431 aaPredicted RBP26.05■■□□□ 1.76
SSBP4-203ENST00000593641 LMBR1Q8WVP7 490 aa26.05■■□□□ 1.76
SSBP4-203ENST00000593641 APBB2Q92870 758 aa26.05■■□□□ 1.76
SSBP4-203ENST00000593641 PSTPIP2Q9H939 334 aa26.05■■□□□ 1.76
SSBP4-203ENST00000593641 SH2B2O14492 632 aaPredicted RBP26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms