RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 A0A0C4DFX4 3053 aa15.28■□□□□ 0.04
APOC1-209ENST00000592885 COL4A4P53420 1690 aaPredicted RBP15.28■□□□□ 0.04
APOC1-209ENST00000592885 GNAT1P11488 350 aa15.27■□□□□ 0.04
APOC1-209ENST00000592885 SEMA3FQ13275 785 aa15.27■□□□□ 0.04
APOC1-209ENST00000592885 ZNF618Q5T7W0 954 aa15.27■□□□□ 0.04
APOC1-209ENST00000592885 TRAF7Q6Q0C0 670 aa15.27■□□□□ 0.04
APOC1-209ENST00000592885 USP17L6PQ6QN14 398 aa15.27■□□□□ 0.04
APOC1-209ENST00000592885 SYNE3Q6ZMZ3 975 aa15.27■□□□□ 0.04
APOC1-209ENST00000592885 GPR20Q99678 358 aa15.27■□□□□ 0.04
APOC1-209ENST00000592885 TSPYL2Q9H2G4 693 aaPredicted RBP15.27■□□□□ 0.04
APOC1-209ENST00000592885 PSTPIP2Q9H939 334 aa15.27■□□□□ 0.04
APOC1-209ENST00000592885 EHMT1Q9H9B1 1298 aa15.27■□□□□ 0.04
APOC1-209ENST00000592885 RBM28Q9NW13 759 aaKnown RBP15.27■□□□□ 0.04
APOC1-209ENST00000592885 MICAL3Q7RTP6 2002 aa15.27■□□□□ 0.03
APOC1-209ENST00000592885 GTPBP6O43824 516 aaPredicted RBP15.26■□□□□ 0.03
APOC1-209ENST00000592885 TLL1O43897 1013 aa15.26■□□□□ 0.03
APOC1-209ENST00000592885 SORBS3O60504 671 aa15.26■□□□□ 0.03
APOC1-209ENST00000592885 LGR5O75473 907 aa15.26■□□□□ 0.03
APOC1-209ENST00000592885 SMIM10L2AP0DMW4 78 aa15.26■□□□□ 0.03
APOC1-209ENST00000592885 SMIM10L2BP0DMW5 78 aa15.26■□□□□ 0.03
APOC1-209ENST00000592885 TAP1Q03518 808 aa15.26■□□□□ 0.03
APOC1-209ENST00000592885 IKBKEQ14164 716 aa15.26■□□□□ 0.03
APOC1-209ENST00000592885 TSGA10IPQ3SY00 556 aa15.26■□□□□ 0.03
APOC1-209ENST00000592885 PPP1R18Q6NYC8 613 aa15.26■□□□□ 0.03
APOC1-209ENST00000592885 CYFIP1Q7L576 1253 aa15.26■□□□□ 0.03
APOC1-209ENST00000592885 FANCBQ8NB91 859 aa15.26■□□□□ 0.03
APOC1-209ENST00000592885 ATP6V0A1Q93050 837 aa15.26■□□□□ 0.03
APOC1-209ENST00000592885 WNT8BQ93098 351 aa15.26■□□□□ 0.03
APOC1-209ENST00000592885 ZFP91Q96JP5 570 aaPredicted RBP15.26■□□□□ 0.03
APOC1-209ENST00000592885 COL4A6Q14031 1691 aa15.25■□□□□ 0.03
APOC1-209ENST00000592885 CNTNAP5Q8WYK1 1306 aa15.25■□□□□ 0.03
APOC1-209ENST00000592885 SPDYE3A6NKU9 549 aa15.25■□□□□ 0.03
APOC1-209ENST00000592885 hCG_1984214I3L0E3 225 aa15.25■□□□□ 0.03
APOC1-209ENST00000592885 RXRAP19793 462 aa15.25■□□□□ 0.03
APOC1-209ENST00000592885 RCAN1P53805 252 aa15.25■□□□□ 0.03
APOC1-209ENST00000592885 ZNF200P98182 395 aaPredicted RBP15.25■□□□□ 0.03
APOC1-209ENST00000592885 HIC1Q14526 733 aa15.25■□□□□ 0.03
APOC1-209ENST00000592885 KRT32Q14532 448 aa15.25■□□□□ 0.03
APOC1-209ENST00000592885 APOA5Q6Q788 366 aa15.25■□□□□ 0.03
APOC1-209ENST00000592885 MICU3Q86XE3 530 aa15.25■□□□□ 0.03
APOC1-209ENST00000592885 ZNF713Q8N859 430 aaPredicted RBP15.25■□□□□ 0.03
APOC1-209ENST00000592885 PPM1EQ8WY54 764 aa15.25■□□□□ 0.03
APOC1-209ENST00000592885 NEK1Q96PY6 1258 aa15.25■□□□□ 0.03
APOC1-209ENST00000592885 RTEL1Q9NZ71 1219 aa15.25■□□□□ 0.03
APOC1-209ENST00000592885 SIP14410 1827 aa15.24■□□□□ 0.03
APOC1-209ENST00000592885 RSPH10B2B2RC85 870 aa15.24■□□□□ 0.03
APOC1-209ENST00000592885 MAFGO15525 162 aa15.24■□□□□ 0.03
APOC1-209ENST00000592885 CDC45O75419 566 aa15.24■□□□□ 0.03
APOC1-209ENST00000592885 GJB5O95377 273 aa15.24■□□□□ 0.03
APOC1-209ENST00000592885 RSPH10BP0C881 870 aa15.24■□□□□ 0.03
APOC1-209ENST00000592885 THPOP40225 353 aa15.24■□□□□ 0.03
APOC1-209ENST00000592885 DEFB103AP81534 67 aa15.24■□□□□ 0.03
APOC1-209ENST00000592885 MRPS5P82675 430 aaKnown RBP15.24■□□□□ 0.03
APOC1-209ENST00000592885 MBTPS1Q14703 1052 aa15.24■□□□□ 0.03
APOC1-209ENST00000592885 RAD9AQ99638 391 aa15.24■□□□□ 0.03
APOC1-209ENST00000592885 ZBED2Q9BTP6 218 aa15.24■□□□□ 0.03
APOC1-209ENST00000592885 RNPEPQ9H4A4 650 aa15.24■□□□□ 0.03
APOC1-209ENST00000592885 PRUNE2Q8WUY3 3088 aa15.23■□□□□ 0.03
APOC1-209ENST00000592885 NRCAMQ92823 1304 aa15.23■□□□□ 0.03
APOC1-209ENST00000592885 CHD7Q9P2D1 2997 aa15.23■□□□□ 0.03
APOC1-209ENST00000592885 SPTBN5Q9NRC6 3674 aaKnown RBP15.23■□□□□ 0.03
APOC1-209ENST00000592885 HMGB1P09429 215 aaKnown RBP15.23■□□□□ 0.03
APOC1-209ENST00000592885 KCNA2P16389 499 aa15.23■□□□□ 0.03
APOC1-209ENST00000592885 MKRN4PQ13434 485 aaPredicted RBP15.23■□□□□ 0.03
APOC1-209ENST00000592885 COL9A3Q14050 684 aaPredicted RBP15.23■□□□□ 0.03
APOC1-209ENST00000592885 PLEKHG4Q58EX7 1191 aa15.23■□□□□ 0.03
APOC1-209ENST00000592885 DHX32Q7L7V1 743 aaKnown RBP15.23■□□□□ 0.03
APOC1-209ENST00000592885 HEATR3Q7Z4Q2 680 aa15.23■□□□□ 0.03
APOC1-209ENST00000592885 CMTR1Q8N1G2 835 aaKnown RBP15.23■□□□□ 0.03
APOC1-209ENST00000592885 ASB2Q96Q27 587 aa15.23■□□□□ 0.03
APOC1-209ENST00000592885 LRRC2Q9BYS8 371 aa15.23■□□□□ 0.03
APOC1-209ENST00000592885 BCAS3Q9H6U6 928 aa15.23■□□□□ 0.03
APOC1-209ENST00000592885 PRDM6Q9NQX0 595 aa15.23■□□□□ 0.03
APOC1-209ENST00000592885 UBIAD1Q9Y5Z9 338 aa15.23■□□□□ 0.03
APOC1-209ENST00000592885 MTCH2Q9Y6C9 303 aa15.23■□□□□ 0.03
APOC1-209ENST00000592885 KAT6AQ92794 2004 aa15.22■□□□□ 0.03
APOC1-209ENST00000592885 TREHO43280 583 aa15.22■□□□□ 0.03
APOC1-209ENST00000592885 ZBTB43O43298 467 aa15.22■□□□□ 0.03
APOC1-209ENST00000592885 AMHP03971 560 aa15.22■□□□□ 0.03
APOC1-209ENST00000592885 RPLP2P05387 115 aaKnown RBP15.22■□□□□ 0.03
APOC1-209ENST00000592885 ITGB5P18084 799 aa15.22■□□□□ 0.03
APOC1-209ENST00000592885 TCF7P36402 384 aaPredicted RBP15.22■□□□□ 0.03
APOC1-209ENST00000592885 ADAM17P78536 824 aa15.22■□□□□ 0.03
APOC1-209ENST00000592885 EXOSC10Q01780 885 aaKnown RBP15.22■□□□□ 0.03
APOC1-209ENST00000592885 MTMR1Q13613 665 aa15.22■□□□□ 0.03
APOC1-209ENST00000592885 CCDC85BQ15834 202 aaPredicted RBP15.22■□□□□ 0.03
APOC1-209ENST00000592885 RTN1Q16799 776 aa15.22■□□□□ 0.03
APOC1-209ENST00000592885 AAK1Q2M2I8 961 aa15.22■□□□□ 0.03
APOC1-209ENST00000592885 RPAINQ86UA6 219 aa15.22■□□□□ 0.03
APOC1-209ENST00000592885 TRIM50Q86XT4 487 aa15.22■□□□□ 0.03
APOC1-209ENST00000592885 LMBR1Q8WVP7 490 aa15.22■□□□□ 0.03
APOC1-209ENST00000592885 ARNTL2Q8WYA1 636 aa15.22■□□□□ 0.03
APOC1-209ENST00000592885 APBB2Q92870 758 aa15.22■□□□□ 0.03
APOC1-209ENST00000592885 GLT8D2Q9H1C3 349 aa15.22■□□□□ 0.03
APOC1-209ENST00000592885 LMCD1Q9NZU5 365 aa15.22■□□□□ 0.03
APOC1-209ENST00000592885 PCDHA6Q9UN73 950 aa15.22■□□□□ 0.03
APOC1-209ENST00000592885 PCDHA8Q9Y5H6 950 aa15.22■□□□□ 0.03
APOC1-209ENST00000592885 VCANP13611 3396 aa15.22■□□□□ 0.03
APOC1-209ENST00000592885 EPOPA6NHQ4 379 aa15.21■□□□□ 0.03
APOC1-209ENST00000592885 ARHGEF15O94989 841 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms