RNA–Protein interactions for RNA: ENST00000592864.2

CACNA1A-211, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3 BASIC

Gene CACNA1A, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-211ENST00000592864 PCDHA12Q9UN75 941 aa15.73■□□□□ 0.11
CACNA1A-211ENST00000592864 GAS7O60861 476 aa15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 DUSP11O75319 330 aaKnown RBP15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 KCNA2P16389 499 aa15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 SMPD1P17405 629 aa15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 SP2Q02086 613 aa15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 CEBPZQ03701 1054 aaKnown RBP15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 STK38Q15208 465 aa15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 TMEM266Q2M3C6 531 aa15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 CELF3Q5SZQ8 465 aaKnown RBP15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 LRCH2Q5VUJ6 765 aa15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 HAS1Q92839 578 aa15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 RAB34Q9BZG1 259 aa15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 SCAND2PQ9GZW5 306 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 AP5M1Q9H0R1 490 aa15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 ATP9AO75110 1047 aa15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 PSMD10O75832 226 aa15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 ARIH2O95376 493 aa15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 GGPS1O95749 300 aa15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 RARBP10826 455 aa15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 NCLP19338 710 aaKnown RBP15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 UBA1P22314 1058 aaKnown RBP15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 CCND3P30281 292 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 TXKP42681 527 aa15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 KRT76Q01546 638 aa15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 METTL7BQ6UX53 244 aa15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 DTHD1Q6ZMT9 781 aa15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 EMID1Q96A84 441 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 ARMC5Q96C12 935 aa15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 TMEM60Q9H2L4 133 aa15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 SPC25Q9HBM1 224 aa15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 DDX20Q9UHI6 824 aaKnown RBP15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 GNEQ9Y223 722 aaKnown RBP15.72■□□□□ 0.11
CACNA1A-211ENST00000592864 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.71■□□□□ 0.11
CACNA1A-211ENST00000592864 PDIA5Q14554 519 aa15.71■□□□□ 0.11
CACNA1A-211ENST00000592864 PTPAQ15257 358 aa15.71■□□□□ 0.11
CACNA1A-211ENST00000592864 BRDTQ58F21 947 aaPredicted RBP15.71■□□□□ 0.11
CACNA1A-211ENST00000592864 CYFIP1Q7L576 1253 aa15.71■□□□□ 0.11
CACNA1A-211ENST00000592864 LINC00301Q8NCQ3 95 aa15.71■□□□□ 0.11
CACNA1A-211ENST00000592864 KCNG4Q8TDN1 519 aa15.71■□□□□ 0.11
CACNA1A-211ENST00000592864 TNPO1Q92973 898 aaKnown RBP15.71■□□□□ 0.11
CACNA1A-211ENST00000592864 FERMT2Q96AC1 680 aa15.71■□□□□ 0.11
CACNA1A-211ENST00000592864 TTC12Q9H892 705 aaPredicted RBP15.71■□□□□ 0.11
CACNA1A-211ENST00000592864 JPH1Q9HDC5 661 aaPredicted RBP15.71■□□□□ 0.11
CACNA1A-211ENST00000592864 PKD2L1Q9P0L9 805 aa15.71■□□□□ 0.11
CACNA1A-211ENST00000592864 SLC9A2Q9UBY0 812 aa15.71■□□□□ 0.11
CACNA1A-211ENST00000592864 RCOR1Q9UKL0 485 aa15.71■□□□□ 0.11
CACNA1A-211ENST00000592864 STK24Q9Y6E0 443 aa15.71■□□□□ 0.11
CACNA1A-211ENST00000592864 DOCK5Q9H7D0 1870 aa15.71■□□□□ 0.11
CACNA1A-211ENST00000592864 SPTLC2O15270 562 aa15.7■□□□□ 0.1
CACNA1A-211ENST00000592864 DHX15O43143 795 aaKnown RBP15.7■□□□□ 0.1
CACNA1A-211ENST00000592864 DYNC1LI2O43237 492 aaPredicted RBP15.7■□□□□ 0.1
CACNA1A-211ENST00000592864 PPP6R2O75170 966 aa15.7■□□□□ 0.1
CACNA1A-211ENST00000592864 CAPN2P17655 700 aa15.7■□□□□ 0.1
CACNA1A-211ENST00000592864 SFNP31947 248 aa15.7■□□□□ 0.1
CACNA1A-211ENST00000592864 ITGB3BPQ13352 177 aaPredicted RBP15.7■□□□□ 0.1
CACNA1A-211ENST00000592864 CSPP1Q1MSJ5 1256 aa15.7■□□□□ 0.1
CACNA1A-211ENST00000592864 ZNF746Q6NUN9 644 aaPredicted RBP15.7■□□□□ 0.1
CACNA1A-211ENST00000592864 OR6J1Q8NGC5 347 aa15.7■□□□□ 0.1
CACNA1A-211ENST00000592864 SPATA32Q96LK8 384 aa15.7■□□□□ 0.1
CACNA1A-211ENST00000592864 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.7■□□□□ 0.1
CACNA1A-211ENST00000592864 NOP56O00567 594 aaKnown RBP15.69■□□□□ 0.1
CACNA1A-211ENST00000592864 FARP2O94887 1054 aaPredicted RBP15.69■□□□□ 0.1
CACNA1A-211ENST00000592864 CCL5P13501 91 aa15.69■□□□□ 0.1
CACNA1A-211ENST00000592864 FXR2P51116 673 aaKnown RBP eCLIP15.69■□□□□ 0.1
CACNA1A-211ENST00000592864 PPP2R5CQ13362 524 aa15.69■□□□□ 0.1
CACNA1A-211ENST00000592864 TLK2Q86UE8 772 aa15.69■□□□□ 0.1
CACNA1A-211ENST00000592864 SMAP1Q8IYB5 467 aaPredicted RBP15.69■□□□□ 0.1
CACNA1A-211ENST00000592864 RDM1Q8NG50 284 aa15.69■□□□□ 0.1
CACNA1A-211ENST00000592864 ZNF333Q96JL9 665 aa15.69■□□□□ 0.1
CACNA1A-211ENST00000592864 SPATA33Q96N06 139 aa15.69■□□□□ 0.1
CACNA1A-211ENST00000592864 FTOQ9C0B1 505 aaKnown RBP eCLIP15.69■□□□□ 0.1
CACNA1A-211ENST00000592864 RNF208Q9H0X6 261 aa15.69■□□□□ 0.1
CACNA1A-211ENST00000592864 SRPRBQ9Y5M8 271 aaKnown RBP15.69■□□□□ 0.1
CACNA1A-211ENST00000592864 ZEB2O60315 1214 aa15.68■□□□□ 0.1
CACNA1A-211ENST00000592864 TECP42680 631 aa15.68■□□□□ 0.1
CACNA1A-211ENST00000592864 CPT1AP50416 773 aa15.68■□□□□ 0.1
CACNA1A-211ENST00000592864 JAK3P52333 1124 aa15.68■□□□□ 0.1
CACNA1A-211ENST00000592864 GJA9P57773 515 aa15.68■□□□□ 0.1
CACNA1A-211ENST00000592864 ARHGAP1Q07960 439 aa15.68■□□□□ 0.1
CACNA1A-211ENST00000592864 KRI1Q8N9T8 703 aaKnown RBP15.68■□□□□ 0.1
CACNA1A-211ENST00000592864 PPTC7Q8NI37 304 aa15.68■□□□□ 0.1
CACNA1A-211ENST00000592864 SEPT1Q8WYJ6 367 aa15.68■□□□□ 0.1
CACNA1A-211ENST00000592864 COPS5Q92905 334 aa15.68■□□□□ 0.1
CACNA1A-211ENST00000592864 UIMC1Q96RL1 719 aa15.68■□□□□ 0.1
CACNA1A-211ENST00000592864 UNC93B1Q9H1C4 597 aa15.68■□□□□ 0.1
CACNA1A-211ENST00000592864 UPF3AQ9H1J1 476 aaKnown RBP15.68■□□□□ 0.1
CACNA1A-211ENST00000592864 XPNPEP3Q9NQH7 507 aa15.68■□□□□ 0.1
CACNA1A-211ENST00000592864 ELP1O95163 1332 aa15.68■□□□□ 0.1
CACNA1A-211ENST00000592864 WDR64B1ANS9 1081 aa15.68■□□□□ 0.1
CACNA1A-211ENST00000592864 DDX39AO00148 427 aaKnown RBP15.68■□□□□ 0.1
CACNA1A-211ENST00000592864 KPNA6O60684 536 aa15.68■□□□□ 0.1
CACNA1A-211ENST00000592864 MARCKSP29966 332 aaPredicted RBP15.68■□□□□ 0.1
CACNA1A-211ENST00000592864 LONP1P36776 959 aaKnown RBP15.68■□□□□ 0.1
CACNA1A-211ENST00000592864 NKX3-2P78367 333 aa15.68■□□□□ 0.1
CACNA1A-211ENST00000592864 MIS18BP1Q6P0N0 1132 aa15.68■□□□□ 0.1
CACNA1A-211ENST00000592864 CLEC17AQ6ZS10 378 aa15.68■□□□□ 0.1
CACNA1A-211ENST00000592864 ARRDC4Q8NCT1 418 aa15.68■□□□□ 0.1
CACNA1A-211ENST00000592864 ERMNQ8TAM6 284 aa15.68■□□□□ 0.1
CACNA1A-211ENST00000592864 AK8Q96MA6 479 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms