RNA–Protein interactions for RNA: ENST00000591956.1

SNHG16-208, Transcript of small nucleolar RNA host gene 16, humanhuman

TSL 2

Gene SNHG16, Length 556 nt, Biotype lincRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG16-208ENST00000591956 KIAA0355O15063 1070 aa12.95□□□□□ -0.34
SNHG16-208ENST00000591956 ATP9AO75110 1047 aa12.95□□□□□ -0.34
SNHG16-208ENST00000591956 PPFIA3O75145 1194 aa12.95□□□□□ -0.34
SNHG16-208ENST00000591956 ATG7O95352 703 aa12.95□□□□□ -0.34
SNHG16-208ENST00000591956 BMP8BP34820 402 aa12.95□□□□□ -0.34
SNHG16-208ENST00000591956 ZNF76P36508 570 aa12.95□□□□□ -0.34
SNHG16-208ENST00000591956 RTP1P59025 263 aa12.95□□□□□ -0.34
SNHG16-208ENST00000591956 Q4G0T1 1027 aa12.95□□□□□ -0.34
SNHG16-208ENST00000591956 PPP4R3AQ6IN85 833 aa12.95□□□□□ -0.34
SNHG16-208ENST00000591956 CYFIP1Q7L576 1253 aa12.95□□□□□ -0.34
SNHG16-208ENST00000591956 SEPT1Q8WYJ6 367 aa12.95□□□□□ -0.34
SNHG16-208ENST00000591956 VTI1AQ96AJ9 217 aa12.95□□□□□ -0.34
SNHG16-208ENST00000591956 MBOAT7Q96N66 472 aa12.95□□□□□ -0.34
SNHG16-208ENST00000591956 AIFM3Q96NN9 605 aa12.95□□□□□ -0.34
SNHG16-208ENST00000591956 GPR20Q99678 358 aa12.95□□□□□ -0.34
SNHG16-208ENST00000591956 C16orf70Q9BSU1 422 aa12.95□□□□□ -0.34
SNHG16-208ENST00000591956 BRMS1Q9HCU9 246 aa12.95□□□□□ -0.34
SNHG16-208ENST00000591956 LAMA3Q16787 3333 aa12.95□□□□□ -0.34
SNHG16-208ENST00000591956 FAM86B1E9PN63 330 aa12.94□□□□□ -0.34
SNHG16-208ENST00000591956 SOX1O00570 391 aaPredicted RBP12.94□□□□□ -0.34
SNHG16-208ENST00000591956 TLR3O15455 904 aaKnown RBP12.94□□□□□ -0.34
SNHG16-208ENST00000591956 EDIL3O43854 480 aa12.94□□□□□ -0.34
SNHG16-208ENST00000591956 F2P00734 622 aa12.94□□□□□ -0.34
SNHG16-208ENST00000591956 MMP1P03956 469 aa12.94□□□□□ -0.34
SNHG16-208ENST00000591956 FAM86B2P0C5J1 330 aa12.94□□□□□ -0.34
SNHG16-208ENST00000591956 ATN1P54259 1190 aaPredicted RBP12.94□□□□□ -0.34
SNHG16-208ENST00000591956 TLE2Q04725 743 aa12.94□□□□□ -0.34
SNHG16-208ENST00000591956 FAAP100Q0VG06 881 aa12.94□□□□□ -0.34
SNHG16-208ENST00000591956 TRIM29Q14134 588 aa12.94□□□□□ -0.34
SNHG16-208ENST00000591956 NONOQ15233 471 aaKnown RBP eCLIP12.94□□□□□ -0.34
SNHG16-208ENST00000591956 CCDC83Q8IWF9 413 aa12.94□□□□□ -0.34
SNHG16-208ENST00000591956 FAM126BQ8IXS8 530 aa12.94□□□□□ -0.34
SNHG16-208ENST00000591956 FBXO18Q8NFZ0 1043 aa12.94□□□□□ -0.34
SNHG16-208ENST00000591956 CYP2W1Q8TAV3 490 aa12.94□□□□□ -0.34
SNHG16-208ENST00000591956 TBCKQ8TEA7 893 aa12.94□□□□□ -0.34
SNHG16-208ENST00000591956 TNPO1Q92973 898 aaKnown RBP12.94□□□□□ -0.34
SNHG16-208ENST00000591956 LRCH3Q96II8 777 aa12.94□□□□□ -0.34
SNHG16-208ENST00000591956 TMX3Q96JJ7 454 aa12.94□□□□□ -0.34
SNHG16-208ENST00000591956 AGO4Q9HCK5 861 aaKnown RBP12.94□□□□□ -0.34
SNHG16-208ENST00000591956 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.94□□□□□ -0.34
SNHG16-208ENST00000591956 A0A1W2PPC1 479 aa12.93□□□□□ -0.34
SNHG16-208ENST00000591956 H3BRB1 525 aa12.93□□□□□ -0.34
SNHG16-208ENST00000591956 IPO5O00410 1097 aaKnown RBP12.93□□□□□ -0.34
SNHG16-208ENST00000591956 NOP56O00567 594 aaKnown RBP12.93□□□□□ -0.34
SNHG16-208ENST00000591956 ADAMTS3O15072 1205 aa12.93□□□□□ -0.34
SNHG16-208ENST00000591956 DHX15O43143 795 aaKnown RBP12.93□□□□□ -0.34
SNHG16-208ENST00000591956 JAK2O60674 1132 aa12.93□□□□□ -0.34
SNHG16-208ENST00000591956 MYL3P08590 195 aa12.93□□□□□ -0.34
SNHG16-208ENST00000591956 CLTBP09497 229 aa12.93□□□□□ -0.34
SNHG16-208ENST00000591956 ARP10275 920 aa12.93□□□□□ -0.34
SNHG16-208ENST00000591956 GCFC2P16383 781 aaKnown RBP12.93□□□□□ -0.34
SNHG16-208ENST00000591956 PTGS1P23219 599 aa12.93□□□□□ -0.34
SNHG16-208ENST00000591956 KRT2P35908 639 aa12.93□□□□□ -0.34
SNHG16-208ENST00000591956 SLC26A2P50443 739 aa12.93□□□□□ -0.34
SNHG16-208ENST00000591956 NBPF20Q3BBV1 942 aa12.93□□□□□ -0.34
SNHG16-208ENST00000591956 TRIM60Q495X7 471 aa12.93□□□□□ -0.34
SNHG16-208ENST00000591956 KRT40Q6A162 431 aa12.93□□□□□ -0.34
SNHG16-208ENST00000591956 PLA2G4DQ86XP0 818 aa12.93□□□□□ -0.34
SNHG16-208ENST00000591956 KAT2BQ92831 832 aa12.93□□□□□ -0.34
SNHG16-208ENST00000591956 TNFRSF25Q93038 417 aa12.93□□□□□ -0.34
SNHG16-208ENST00000591956 ZFP91Q96JP5 570 aaPredicted RBP12.93□□□□□ -0.34
SNHG16-208ENST00000591956 RIT2Q99578 217 aa12.93□□□□□ -0.34
SNHG16-208ENST00000591956 GDF15Q99988 308 aa12.93□□□□□ -0.34
SNHG16-208ENST00000591956 SDF4Q9BRK5 362 aa12.93□□□□□ -0.34
SNHG16-208ENST00000591956 FOXP1Q9H334 677 aaPredicted RBP12.93□□□□□ -0.34
SNHG16-208ENST00000591956 TUT1Q9H6E5 874 aaKnown RBP12.93□□□□□ -0.34
SNHG16-208ENST00000591956 JPH1Q9HDC5 661 aaPredicted RBP12.93□□□□□ -0.34
SNHG16-208ENST00000591956 SLC9A2Q9UBY0 812 aa12.93□□□□□ -0.34
SNHG16-208ENST00000591956 PRKAG2Q9UGJ0 569 aa12.93□□□□□ -0.34
SNHG16-208ENST00000591956 KCNJ14Q9UNX9 436 aa12.93□□□□□ -0.34
SNHG16-208ENST00000591956 IGKV6D-21A0A0A0MT36 114 aa12.92□□□□□ -0.34
SNHG16-208ENST00000591956 CCDC194A0A1B0GVG4 234 aa12.92□□□□□ -0.34
SNHG16-208ENST00000591956 GSTTP1A0A1W2PQM5 241 aa12.92□□□□□ -0.34
SNHG16-208ENST00000591956 TBX3O15119 743 aa12.92□□□□□ -0.34
SNHG16-208ENST00000591956 CUL4AQ13619 759 aa12.92□□□□□ -0.34
SNHG16-208ENST00000591956 SAFBQ15424 915 aaKnown RBP eCLIP12.92□□□□□ -0.34
SNHG16-208ENST00000591956 ZNF746Q6NUN9 644 aaPredicted RBP12.92□□□□□ -0.34
SNHG16-208ENST00000591956 PLPPR4Q7Z2D5 763 aa12.92□□□□□ -0.34
SNHG16-208ENST00000591956 NEK8Q86SG6 692 aa12.92□□□□□ -0.34
SNHG16-208ENST00000591956 SMAP1Q8IYB5 467 aaPredicted RBP12.92□□□□□ -0.34
SNHG16-208ENST00000591956 SNX21Q969T3 373 aa12.92□□□□□ -0.34
SNHG16-208ENST00000591956 LENG9Q96B70 501 aa12.92□□□□□ -0.34
SNHG16-208ENST00000591956 INTS4Q96HW7 963 aaKnown RBP12.92□□□□□ -0.34
SNHG16-208ENST00000591956 PGBD1Q96JS3 809 aa12.92□□□□□ -0.34
SNHG16-208ENST00000591956 C8orf76Q96K31 380 aa12.92□□□□□ -0.34
SNHG16-208ENST00000591956 SMARCAD1Q9H4L7 1026 aa12.92□□□□□ -0.34
SNHG16-208ENST00000591956 BCAS3Q9H6U6 928 aa12.92□□□□□ -0.34
SNHG16-208ENST00000591956 TBX21Q9UL17 535 aa12.92□□□□□ -0.34
SNHG16-208ENST00000591956 ATP11BQ9Y2G3 1177 aa12.92□□□□□ -0.34
SNHG16-208ENST00000591956 LGR5O75473 907 aa12.91□□□□□ -0.34
SNHG16-208ENST00000591956 CD2BP2O95400 341 aaKnown RBP12.91□□□□□ -0.34
SNHG16-208ENST00000591956 TIMP1P01033 207 aa12.91□□□□□ -0.34
SNHG16-208ENST00000591956 PDIA4P13667 645 aaKnown RBP12.91□□□□□ -0.34
SNHG16-208ENST00000591956 HOXC8P31273 242 aa12.91□□□□□ -0.34
SNHG16-208ENST00000591956 ORC2Q13416 577 aaPredicted RBP12.91□□□□□ -0.34
SNHG16-208ENST00000591956 FAM184AQ8NB25 1140 aa12.91□□□□□ -0.34
SNHG16-208ENST00000591956 RASGRP4Q8TDF6 673 aa12.91□□□□□ -0.34
SNHG16-208ENST00000591956 FAM20AQ96MK3 541 aa12.91□□□□□ -0.34
SNHG16-208ENST00000591956 ZNF577Q9BSK1 485 aa12.91□□□□□ -0.34
SNHG16-208ENST00000591956 PDLIM7Q9NR12 457 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms