RNA–Protein interactions for RNA: ENST00000591472.6

SEPT9-238, Transcript of septin 9, human

TSL 4

Gene SEPT9, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEPT9-238	ENST00000591472	TBC1D22B	Q9NU19	505 aa		13.58	□□□□□ -0.24
SEPT9-238	ENST00000591472	CHMP5	Q9NZZ3	219 aa		13.58	□□□□□ -0.24
SEPT9-238	ENST00000591472	PKD2L1	Q9P0L9	805 aa		13.58	□□□□□ -0.24
SEPT9-238	ENST00000591472	DOCK5	Q9H7D0	1870 aa		13.57	□□□□□ -0.24
SEPT9-238	ENST00000591472	DHX15	O43143	795 aa	Known RBP	13.57	□□□□□ -0.24
SEPT9-238	ENST00000591472	DYNC1LI2	O43237	492 aa	Predicted RBP	13.57	□□□□□ -0.24
SEPT9-238	ENST00000591472	MARCH6	O60337	910 aa		13.57	□□□□□ -0.24
SEPT9-238	ENST00000591472	FARP2	O94887	1054 aa	Predicted RBP	13.57	□□□□□ -0.24
SEPT9-238	ENST00000591472	GJB1	P08034	283 aa		13.57	□□□□□ -0.24
SEPT9-238	ENST00000591472	NKX3-2	P78367	333 aa		13.57	□□□□□ -0.24
SEPT9-238	ENST00000591472	ITGB3BP	Q13352	177 aa	Predicted RBP	13.57	□□□□□ -0.24
SEPT9-238	ENST00000591472	FAM173B	Q6P4H8	233 aa		13.57	□□□□□ -0.24
SEPT9-238	ENST00000591472	METTL7B	Q6UX53	244 aa		13.57	□□□□□ -0.24
SEPT9-238	ENST00000591472	CYFIP1	Q7L576	1253 aa		13.57	□□□□□ -0.24
SEPT9-238	ENST00000591472	ZNF396	Q96N95	335 aa	Predicted RBP	13.57	□□□□□ -0.24
SEPT9-238	ENST00000591472	TMEM106C	Q9BVX2	250 aa		13.57	□□□□□ -0.24
SEPT9-238	ENST00000591472	MLXIP	Q9HAP2	919 aa		13.57	□□□□□ -0.24
SEPT9-238	ENST00000591472	ATP6V1D	Q9Y5K8	247 aa		13.57	□□□□□ -0.24
SEPT9-238	ENST00000591472	SYNRG	Q9UMZ2	1314 aa		13.57	□□□□□ -0.24
SEPT9-238	ENST00000591472	LAD1	O00515	517 aa		13.56	□□□□□ -0.24
SEPT9-238	ENST00000591472	GAS7	O60861	476 aa		13.56	□□□□□ -0.24
SEPT9-238	ENST00000591472	PSMD10	O75832	226 aa		13.56	□□□□□ -0.24
SEPT9-238	ENST00000591472	BMP15	O95972	392 aa		13.56	□□□□□ -0.24
SEPT9-238	ENST00000591472	OR52Z1	P0C646	297 aa		13.56	□□□□□ -0.24
SEPT9-238	ENST00000591472	CAPN2	P17655	700 aa		13.56	□□□□□ -0.24
SEPT9-238	ENST00000591472	PTGS1	P23219	599 aa		13.56	□□□□□ -0.24
SEPT9-238	ENST00000591472	PTGDR	Q13258	359 aa		13.56	□□□□□ -0.24
SEPT9-238	ENST00000591472	LRCH2	Q5VUJ6	765 aa		13.56	□□□□□ -0.24
SEPT9-238	ENST00000591472	ATL3	Q6DD88	541 aa		13.56	□□□□□ -0.24
SEPT9-238	ENST00000591472	CLEC17A	Q6ZS10	378 aa		13.56	□□□□□ -0.24
SEPT9-238	ENST00000591472	C4orf32	Q8N8J7	132 aa		13.56	□□□□□ -0.24
SEPT9-238	ENST00000591472	PPTC7	Q8NI37	304 aa		13.56	□□□□□ -0.24
SEPT9-238	ENST00000591472	HAS1	Q92839	578 aa		13.56	□□□□□ -0.24
SEPT9-238	ENST00000591472	SPATA33	Q96N06	139 aa		13.56	□□□□□ -0.24
SEPT9-238	ENST00000591472	MTMR9	Q96QG7	549 aa		13.56	□□□□□ -0.24
SEPT9-238	ENST00000591472	UIMC1	Q96RL1	719 aa		13.56	□□□□□ -0.24
SEPT9-238	ENST00000591472	TEKT3	Q9BXF9	490 aa		13.56	□□□□□ -0.24
SEPT9-238	ENST00000591472	TMEM60	Q9H2L4	133 aa		13.56	□□□□□ -0.24
SEPT9-238	ENST00000591472	BCAS3	Q9H6U6	928 aa		13.56	□□□□□ -0.24
SEPT9-238	ENST00000591472	JPH1	Q9HDC5	661 aa	Predicted RBP	13.56	□□□□□ -0.24
SEPT9-238	ENST00000591472	SLC9A2	Q9UBY0	812 aa		13.56	□□□□□ -0.24
SEPT9-238	ENST00000591472	TCEAL9	Q9UHQ7	104 aa		13.56	□□□□□ -0.24
SEPT9-238	ENST00000591472	CEP131	Q9UPN4	1083 aa		13.56	□□□□□ -0.24
SEPT9-238	ENST00000591472	POTEF	A5A3E0	1075 aa		13.55	□□□□□ -0.24
SEPT9-238	ENST00000591472	SORBS3	O60504	671 aa		13.55	□□□□□ -0.24
SEPT9-238	ENST00000591472	ADAMTS4	O75173	837 aa		13.55	□□□□□ -0.24
SEPT9-238	ENST00000591472	SGPL1	O95470	568 aa		13.55	□□□□□ -0.24
SEPT9-238	ENST00000591472	PGK1	P00558	417 aa		13.55	□□□□□ -0.24
SEPT9-238	ENST00000591472	C6orf222	P0C671	652 aa	Predicted RBP	13.55	□□□□□ -0.24
SEPT9-238	ENST00000591472	CST5	P28325	142 aa	Predicted RBP	13.55	□□□□□ -0.24
SEPT9-238	ENST00000591472	GJA8	P48165	433 aa		13.55	□□□□□ -0.24
SEPT9-238	ENST00000591472	CPT1A	P50416	773 aa		13.55	□□□□□ -0.24
SEPT9-238	ENST00000591472	ATP2C1	P98194	919 aa	Predicted RBP	13.55	□□□□□ -0.24
SEPT9-238	ENST00000591472	KRT76	Q01546	638 aa		13.55	□□□□□ -0.24
SEPT9-238	ENST00000591472	SF3A1	Q15459	793 aa	Known RBP	13.55	□□□□□ -0.24
SEPT9-238	ENST00000591472	FSCN1	Q16658	493 aa	Known RBP	13.55	□□□□□ -0.24
SEPT9-238	ENST00000591472	BRDT	Q58F21	947 aa	Predicted RBP	13.55	□□□□□ -0.24
SEPT9-238	ENST00000591472	RNF180	Q86T96	592 aa		13.55	□□□□□ -0.24
SEPT9-238	ENST00000591472	ARRDC4	Q8NCT1	418 aa		13.55	□□□□□ -0.24
SEPT9-238	ENST00000591472	U2AF1L4	Q8WU68	220 aa	Known RBP	13.55	□□□□□ -0.24
SEPT9-238	ENST00000591472	AFG1L	Q8WV93	481 aa		13.55	□□□□□ -0.24
SEPT9-238	ENST00000591472	GJA10	Q969M2	543 aa		13.55	□□□□□ -0.24
SEPT9-238	ENST00000591472	ABHD8	Q96I13	439 aa		13.55	□□□□□ -0.24
SEPT9-238	ENST00000591472	CRISPLD2	Q9H0B8	497 aa		13.55	□□□□□ -0.24
SEPT9-238	ENST00000591472	POLR3E	Q9NVU0	708 aa		13.55	□□□□□ -0.24
SEPT9-238	ENST00000591472	OGDHL	Q9ULD0	1010 aa		13.55	□□□□□ -0.24
SEPT9-238	ENST00000591472		A6NJR5	290 aa		13.54	□□□□□ -0.24
SEPT9-238	ENST00000591472	DDX39A	O00148	427 aa	Known RBP	13.54	□□□□□ -0.24
SEPT9-238	ENST00000591472	NOP56	O00567	594 aa	Known RBP	13.54	□□□□□ -0.24
SEPT9-238	ENST00000591472	CTAGE5	O15320	804 aa		13.54	□□□□□ -0.24
SEPT9-238	ENST00000591472	TFRC	P02786	760 aa	Known RBP	13.54	□□□□□ -0.24
SEPT9-238	ENST00000591472	PRPH	P41219	470 aa		13.54	□□□□□ -0.24
SEPT9-238	ENST00000591472	TXK	P42681	527 aa		13.54	□□□□□ -0.24
SEPT9-238	ENST00000591472	NASP	P49321	788 aa	Predicted RBP	13.54	□□□□□ -0.24
SEPT9-238	ENST00000591472	LRRC41	Q15345	812 aa		13.54	□□□□□ -0.24
SEPT9-238	ENST00000591472	HSDL1	Q3SXM5	330 aa		13.54	□□□□□ -0.24
SEPT9-238	ENST00000591472	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.54	□□□□□ -0.24
SEPT9-238	ENST00000591472	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.54	□□□□□ -0.24
SEPT9-238	ENST00000591472	TNS4	Q8IZW8	715 aa		13.54	□□□□□ -0.24
SEPT9-238	ENST00000591472	KLHDC9	Q8NEP7	349 aa		13.54	□□□□□ -0.24
SEPT9-238	ENST00000591472	TNPO1	Q92973	898 aa	Known RBP	13.54	□□□□□ -0.24
SEPT9-238	ENST00000591472	USP28	Q96RU2	1077 aa		13.54	□□□□□ -0.24
SEPT9-238	ENST00000591472	GPR20	Q99678	358 aa		13.54	□□□□□ -0.24
SEPT9-238	ENST00000591472	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.54	□□□□□ -0.24	7e-6	■■□□□ 12.9
SEPT9-238	ENST00000591472	PCDHA12	Q9UN75	941 aa		13.54	□□□□□ -0.24
SEPT9-238	ENST00000591472	CLIC4	Q9Y696	253 aa		13.54	□□□□□ -0.24
SEPT9-238	ENST00000591472	ELP1	O95163	1332 aa		13.54	□□□□□ -0.24
SEPT9-238	ENST00000591472	KIAA0100	Q14667	2235 aa	Known RBP	13.54	□□□□□ -0.24
SEPT9-238	ENST00000591472	MYADML2	A6NDP7	307 aa		13.53	□□□□□ -0.24
SEPT9-238	ENST00000591472	ZEB2	O60315	1214 aa		13.53	□□□□□ -0.24
SEPT9-238	ENST00000591472	KPNA6	O60684	536 aa		13.53	□□□□□ -0.24
SEPT9-238	ENST00000591472	CCNE2	O96020	404 aa		13.53	□□□□□ -0.24
SEPT9-238	ENST00000591472	MMP3	P08254	477 aa		13.53	□□□□□ -0.24
SEPT9-238	ENST00000591472	HOXD8	P13378	290 aa	Predicted RBP	13.53	□□□□□ -0.24
SEPT9-238	ENST00000591472	ACTR2	P61160	394 aa		13.53	□□□□□ -0.24
SEPT9-238	ENST00000591472	BEX3	Q00994	111 aa		13.53	□□□□□ -0.24
SEPT9-238	ENST00000591472	SP4	Q02446	784 aa		13.53	□□□□□ -0.24
SEPT9-238	ENST00000591472	CEBPZ	Q03701	1054 aa	Known RBP	13.53	□□□□□ -0.24
SEPT9-238	ENST00000591472	PPP2R5C	Q13362	524 aa		13.53	□□□□□ -0.24
SEPT9-238	ENST00000591472	PTPA	Q15257	358 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms