RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 FAM205CA6NFA0 338 aa13.15□□□□□ -0.3
VMP1-211ENST00000591315 M0R2N6 131 aa13.15□□□□□ -0.3
VMP1-211ENST00000591315 MEIS1O00470 390 aa13.15□□□□□ -0.3
VMP1-211ENST00000591315 B4GALT4O60513 344 aa13.15□□□□□ -0.3
VMP1-211ENST00000591315 CABYRO75952 493 aa13.15□□□□□ -0.3
VMP1-211ENST00000591315 CLTBP09497 229 aa13.15□□□□□ -0.3
VMP1-211ENST00000591315 TGFB3P10600 412 aa13.15□□□□□ -0.3
VMP1-211ENST00000591315 HOXD8P13378 290 aaPredicted RBP13.15□□□□□ -0.3
VMP1-211ENST00000591315 GNA11P29992 359 aa13.15□□□□□ -0.3
VMP1-211ENST00000591315 ITGB3BPQ13352 177 aaPredicted RBP13.15□□□□□ -0.3
VMP1-211ENST00000591315 MTMR1Q13613 665 aa13.15□□□□□ -0.3
VMP1-211ENST00000591315 HIC1Q14526 733 aa13.15□□□□□ -0.3
VMP1-211ENST00000591315 RABEP1Q15276 862 aa13.15□□□□□ -0.3
VMP1-211ENST00000591315 CEP55Q53EZ4 464 aa13.15□□□□□ -0.3
VMP1-211ENST00000591315 TRIM50Q86XT4 487 aa13.15□□□□□ -0.3
VMP1-211ENST00000591315 BLIDQ8IZY5 108 aa13.15□□□□□ -0.3
VMP1-211ENST00000591315 PPTC7Q8NI37 304 aa13.15□□□□□ -0.3
VMP1-211ENST00000591315 ALG1Q9BT22 464 aa13.15□□□□□ -0.3
VMP1-211ENST00000591315 PHF20Q9BVI0 1012 aa13.15□□□□□ -0.3
VMP1-211ENST00000591315 PRO3102Q9H379 93 aa13.15□□□□□ -0.3
VMP1-211ENST00000591315 KCNH7Q9NS40 1196 aa13.15□□□□□ -0.3
VMP1-211ENST00000591315 TMEM39AQ9NV64 488 aa13.15□□□□□ -0.3
VMP1-211ENST00000591315 LTBP2Q14767 1821 aa13.15□□□□□ -0.3
VMP1-211ENST00000591315 UMODL1Q5DID0 1318 aa13.14□□□□□ -0.31
VMP1-211ENST00000591315 IGLV3-22A0A075B6J6 115 aa13.14□□□□□ -0.31
VMP1-211ENST00000591315 CD4P01730 458 aa13.14□□□□□ -0.31
VMP1-211ENST00000591315 ZNF76P36508 570 aa13.14□□□□□ -0.31
VMP1-211ENST00000591315 PSEN2P49810 448 aa13.14□□□□□ -0.31
VMP1-211ENST00000591315 GUCY1B3Q02153 619 aa13.14□□□□□ -0.31
VMP1-211ENST00000591315 DGKDQ16760 1214 aa13.14□□□□□ -0.31
VMP1-211ENST00000591315 BRDTQ58F21 947 aaPredicted RBP13.14□□□□□ -0.31
VMP1-211ENST00000591315 FAM47CQ5HY64 1035 aa13.14□□□□□ -0.31
VMP1-211ENST00000591315 EARS2Q5JPH6 523 aaKnown RBP13.14□□□□□ -0.31
VMP1-211ENST00000591315 UTP14CQ5TAP6 766 aaKnown RBP13.14□□□□□ -0.31
VMP1-211ENST00000591315 METTL7BQ6UX53 244 aa13.14□□□□□ -0.31
VMP1-211ENST00000591315 BADQ92934 168 aa13.14□□□□□ -0.31
VMP1-211ENST00000591315 GJA10Q969M2 543 aa13.14□□□□□ -0.31
VMP1-211ENST00000591315 TOX2Q96NM4 488 aa13.14□□□□□ -0.31
VMP1-211ENST00000591315 GPR20Q99678 358 aa13.14□□□□□ -0.31
VMP1-211ENST00000591315 GDF15Q99988 308 aa13.14□□□□□ -0.31
VMP1-211ENST00000591315 C16orf70Q9BSU1 422 aa13.14□□□□□ -0.31
VMP1-211ENST00000591315 EHMT1Q9H9B1 1298 aa13.14□□□□□ -0.31
VMP1-211ENST00000591315 UPF2Q9HAU5 1272 aaKnown RBP13.14□□□□□ -0.31
VMP1-211ENST00000591315 AGO4Q9HCK5 861 aaKnown RBP13.14□□□□□ -0.31
VMP1-211ENST00000591315 TBX21Q9UL17 535 aa13.14□□□□□ -0.31
VMP1-211ENST00000591315 GSTTP1A0A1W2PQM5 241 aa13.13□□□□□ -0.31
VMP1-211ENST00000591315 DCDC2CA8MYV0 355 aa13.13□□□□□ -0.31
VMP1-211ENST00000591315 DDX39AO00148 427 aaKnown RBP13.13□□□□□ -0.31
VMP1-211ENST00000591315 KIAA0355O15063 1070 aa13.13□□□□□ -0.31
VMP1-211ENST00000591315 KPNA6O60684 536 aa13.13□□□□□ -0.31
VMP1-211ENST00000591315 LGALS2P05162 132 aa13.13□□□□□ -0.31
VMP1-211ENST00000591315 CYP3A4P08684 503 aa13.13□□□□□ -0.31
VMP1-211ENST00000591315 CYP2C9P11712 490 aa13.13□□□□□ -0.31
VMP1-211ENST00000591315 EPHB4P54760 987 aa13.13□□□□□ -0.31
VMP1-211ENST00000591315 ZNF200P98182 395 aaPredicted RBP13.13□□□□□ -0.31
VMP1-211ENST00000591315 NR5A1Q13285 461 aa13.13□□□□□ -0.31
VMP1-211ENST00000591315 NEDD9Q14511 834 aa13.13□□□□□ -0.31
VMP1-211ENST00000591315 MFSD10Q14728 455 aa13.13□□□□□ -0.31
VMP1-211ENST00000591315 GDF6Q6KF10 455 aaPredicted RBP13.13□□□□□ -0.31
VMP1-211ENST00000591315 PLA2G4DQ86XP0 818 aa13.13□□□□□ -0.31
VMP1-211ENST00000591315 DAGLBQ8NCG7 672 aa13.13□□□□□ -0.31
VMP1-211ENST00000591315 BICD2Q8TD16 824 aa13.13□□□□□ -0.31
VMP1-211ENST00000591315 TBCKQ8TEA7 893 aa13.13□□□□□ -0.31
VMP1-211ENST00000591315 LENG9Q96B70 501 aa13.13□□□□□ -0.31
VMP1-211ENST00000591315 CTAGE1Q96RT6 745 aa13.13□□□□□ -0.31
VMP1-211ENST00000591315 SENP7Q9BQF6 1050 aa13.13□□□□□ -0.31
VMP1-211ENST00000591315 PPP1R12CQ9BZL4 782 aa13.13□□□□□ -0.31
VMP1-211ENST00000591315 HAS3O00219 553 aa13.12□□□□□ -0.31
VMP1-211ENST00000591315 NOP56O00567 594 aaKnown RBP13.12□□□□□ -0.31
VMP1-211ENST00000591315 PPFIA4O75335 1185 aa13.12□□□□□ -0.31
VMP1-211ENST00000591315 TDP2O95551 362 aa13.12□□□□□ -0.31
VMP1-211ENST00000591315 CCNE2O96020 404 aa13.12□□□□□ -0.31
VMP1-211ENST00000591315 F2P00734 622 aa13.12□□□□□ -0.31
VMP1-211ENST00000591315 CYP2C18P33260 490 aa13.12□□□□□ -0.31
VMP1-211ENST00000591315 INF2Q27J81 1249 aa13.12□□□□□ -0.31
VMP1-211ENST00000591315 KIAA0753Q2KHM9 967 aa13.12□□□□□ -0.31
VMP1-211ENST00000591315 PRR16Q569H4 304 aa13.12□□□□□ -0.31
VMP1-211ENST00000591315 TEX2Q8IWB9 1127 aa13.12□□□□□ -0.31
VMP1-211ENST00000591315 ZSCAN31Q96LW9 406 aaPredicted RBP13.12□□□□□ -0.31
VMP1-211ENST00000591315 HDAC6Q9UBN7 1215 aa13.12□□□□□ -0.31
VMP1-211ENST00000591315 DHX15O43143 795 aaKnown RBP13.11□□□□□ -0.31
VMP1-211ENST00000591315 CIITAP33076 1130 aa13.11□□□□□ -0.31
VMP1-211ENST00000591315 KRT40Q6A162 431 aa13.11□□□□□ -0.31
VMP1-211ENST00000591315 TNFRSF25Q93038 417 aa13.11□□□□□ -0.31
VMP1-211ENST00000591315 WNT8BQ93098 351 aa13.11□□□□□ -0.31
VMP1-211ENST00000591315 TMX3Q96JJ7 454 aa13.11□□□□□ -0.31
VMP1-211ENST00000591315 CDHR1Q96JP9 859 aa13.11□□□□□ -0.31
VMP1-211ENST00000591315 PCYT2Q99447 389 aa13.11□□□□□ -0.31
VMP1-211ENST00000591315 PRKAG2Q9UGJ0 569 aa13.11□□□□□ -0.31
VMP1-211ENST00000591315 SCN5AQ14524 2016 aa13.1□□□□□ -0.31
VMP1-211ENST00000591315 KAT6AQ92794 2004 aa13.1□□□□□ -0.31
VMP1-211ENST00000591315 BTBD18B2RXH4 712 aa13.1□□□□□ -0.31
VMP1-211ENST00000591315 H3BRB1 525 aa13.1□□□□□ -0.31
VMP1-211ENST00000591315 WNT7AO00755 349 aa13.1□□□□□ -0.31
VMP1-211ENST00000591315 ST18O60284 1047 aa13.1□□□□□ -0.31
VMP1-211ENST00000591315 RAG1P15918 1043 aa13.1□□□□□ -0.31
VMP1-211ENST00000591315 TCF7P36402 384 aaPredicted RBP13.1□□□□□ -0.31
VMP1-211ENST00000591315 CCL23P55773 120 aa13.1□□□□□ -0.31
VMP1-211ENST00000591315 HABP4Q5JVS0 413 aaKnown RBP13.1□□□□□ -0.31
VMP1-211ENST00000591315 C9orf50Q5SZB4 431 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms