RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 TRANK1O15050 2925 aa20.66■□□□□ 0.9
VAT1-208ENST00000590924 ZBTB43O43298 467 aa20.65■□□□□ 0.9
VAT1-208ENST00000590924 GGPS1O95749 300 aa20.65■□□□□ 0.9
VAT1-208ENST00000590924 UBA1P22314 1058 aaKnown RBP20.65■□□□□ 0.9
VAT1-208ENST00000590924 RABEP1Q15276 862 aa20.65■□□□□ 0.9
VAT1-208ENST00000590924 HSDL1Q3SXM5 330 aa20.65■□□□□ 0.9
VAT1-208ENST00000590924 LRRC8DQ7L1W4 858 aa20.65■□□□□ 0.9
VAT1-208ENST00000590924 FCHSD1Q86WN1 690 aa20.65■□□□□ 0.9
VAT1-208ENST00000590924 FANCBQ8NB91 859 aa20.65■□□□□ 0.9
VAT1-208ENST00000590924 ZNF274Q96GC6 653 aaPredicted RBP20.65■□□□□ 0.9
VAT1-208ENST00000590924 LZTS2Q9BRK4 669 aa20.65■□□□□ 0.9
VAT1-208ENST00000590924 ALG1Q9BT22 464 aa20.65■□□□□ 0.9
VAT1-208ENST00000590924 SPZ1Q9BXG8 430 aa20.65■□□□□ 0.9
VAT1-208ENST00000590924 SPTBN5Q9NRC6 3674 aaKnown RBP20.65■□□□□ 0.9
VAT1-208ENST00000590924 REV3LO60673 3130 aa20.64■□□□□ 0.89
VAT1-208ENST00000590924 KLF18A0A0U1RQI7 1052 aa20.64■□□□□ 0.89
VAT1-208ENST00000590924 IGFBP4P22692 258 aa20.64■□□□□ 0.89
VAT1-208ENST00000590924 GPNMBQ14956 572 aa20.64■□□□□ 0.89
VAT1-208ENST00000590924 TJAP1Q5JTD0 557 aa20.64■□□□□ 0.89
VAT1-208ENST00000590924 PPM1EQ8WY54 764 aa20.64■□□□□ 0.89
VAT1-208ENST00000590924 SPATA33Q96N06 139 aa20.64■□□□□ 0.89
VAT1-208ENST00000590924 TCF20Q9UGU0 1960 aaKnown RBP20.63■□□□□ 0.89
VAT1-208ENST00000590924 STAM2O75886 525 aa20.63■□□□□ 0.89
VAT1-208ENST00000590924 CXCL10P02778 98 aa20.63■□□□□ 0.89
VAT1-208ENST00000590924 CA3P07451 260 aa20.63■□□□□ 0.89
VAT1-208ENST00000590924 CKBP12277 381 aa20.63■□□□□ 0.89
VAT1-208ENST00000590924 SP2Q02086 613 aa20.63■□□□□ 0.89
VAT1-208ENST00000590924 APOBRQ0VD83 1088 aa20.63■□□□□ 0.89
VAT1-208ENST00000590924 PTK7Q13308 1070 aa20.63■□□□□ 0.89
VAT1-208ENST00000590924 HERC6Q8IVU3 1022 aa20.63■□□□□ 0.89
VAT1-208ENST00000590924 PRDM6Q9NQX0 595 aa20.63■□□□□ 0.89
VAT1-208ENST00000590924 RBM28Q9NW13 759 aaKnown RBP20.63■□□□□ 0.89
VAT1-208ENST00000590924 THEGQ9P2T0 379 aa20.63■□□□□ 0.89
VAT1-208ENST00000590924 CCDC196A0A1B0GTZ2 297 aa20.62■□□□□ 0.89
VAT1-208ENST00000590924 GNPTABQ3T906 1256 aa20.62■□□□□ 0.89
VAT1-208ENST00000590924 CNKSR3Q6P9H4 555 aa20.62■□□□□ 0.89
VAT1-208ENST00000590924 ATXN2LQ8WWM7 1075 aaKnown RBP20.62■□□□□ 0.89
VAT1-208ENST00000590924 GPKOWQ92917 476 aaPredicted RBP eCLIP20.62■□□□□ 0.89
VAT1-208ENST00000590924 ZFP91Q96JP5 570 aaPredicted RBP20.62■□□□□ 0.89
VAT1-208ENST00000590924 INPP4AQ96PE3 977 aaPredicted RBP20.62■□□□□ 0.89
VAT1-208ENST00000590924 NID2Q14112 1375 aa20.61■□□□□ 0.89
VAT1-208ENST00000590924 KIF28PB7ZC32 967 aa20.61■□□□□ 0.89
VAT1-208ENST00000590924 SORBS3O60504 671 aa20.61■□□□□ 0.89
VAT1-208ENST00000590924 PDIA3P30101 505 aaKnown RBP20.61■□□□□ 0.89
VAT1-208ENST00000590924 ICAM3P32942 547 aa20.61■□□□□ 0.89
VAT1-208ENST00000590924 KCNJ6P48051 423 aa20.61■□□□□ 0.89
VAT1-208ENST00000590924 AK2P54819 239 aa20.61■□□□□ 0.89
VAT1-208ENST00000590924 WDR5P61964 334 aaKnown RBP20.61■□□□□ 0.89
VAT1-208ENST00000590924 MRPS9P82933 396 aaKnown RBP20.61■□□□□ 0.89
VAT1-208ENST00000590924 TRIM71Q2Q1W2 868 aaKnown RBP20.61■□□□□ 0.89
VAT1-208ENST00000590924 PIBF1Q8WXW3 757 aa20.61■□□□□ 0.89
VAT1-208ENST00000590924 RRP36Q96EU6 259 aaKnown RBP20.61■□□□□ 0.89
VAT1-208ENST00000590924 C16orf70Q9BSU1 422 aa20.61■□□□□ 0.89
VAT1-208ENST00000590924 MYL10Q9BUA6 226 aa20.61■□□□□ 0.89
VAT1-208ENST00000590924 MLXIPQ9HAP2 919 aa20.61■□□□□ 0.89
VAT1-208ENST00000590924 NBNO60934 754 aa20.6■□□□□ 0.89
VAT1-208ENST00000590924 CCDC85BQ15834 202 aaPredicted RBP20.6■□□□□ 0.89
VAT1-208ENST00000590924 RTN1Q16799 776 aa20.6■□□□□ 0.89
VAT1-208ENST00000590924 TRAF7Q6Q0C0 670 aa20.6■□□□□ 0.89
VAT1-208ENST00000590924 MICU3Q86XE3 530 aa20.6■□□□□ 0.89
VAT1-208ENST00000590924 WNT8BQ93098 351 aa20.6■□□□□ 0.89
VAT1-208ENST00000590924 MUC3AQ02505 3323 aa20.6■□□□□ 0.89
VAT1-208ENST00000590924 NLRC5Q86WI3 1866 aa20.59■□□□□ 0.89
VAT1-208ENST00000590924 GOLGA8AA7E2F4 631 aa20.59■□□□□ 0.89
VAT1-208ENST00000590924 GOLGA8BA8MQT2 603 aa20.59■□□□□ 0.89
VAT1-208ENST00000590924 PIK3CDO00329 1044 aa20.59■□□□□ 0.89
VAT1-208ENST00000590924 POU3F3P20264 500 aaPredicted RBP20.59■□□□□ 0.89
VAT1-208ENST00000590924 HOXC8P31273 242 aa20.59■□□□□ 0.89
VAT1-208ENST00000590924 METAP2P50579 478 aaKnown RBP eCLIP20.59■□□□□ 0.891e-7■■□□□ 13.4
VAT1-208ENST00000590924 ZNF200P98182 395 aaPredicted RBP20.59■□□□□ 0.89
VAT1-208ENST00000590924 TAP1Q03518 808 aa20.59■□□□□ 0.89
VAT1-208ENST00000590924 NEDD9Q14511 834 aa20.59■□□□□ 0.89
VAT1-208ENST00000590924 HIC1Q14526 733 aa20.59■□□□□ 0.89
VAT1-208ENST00000590924 SEC63Q9UGP8 760 aaKnown RBP20.59■□□□□ 0.89
VAT1-208ENST00000590924 BRWD1Q9NSI6 2320 aa20.58■□□□□ 0.89
VAT1-208ENST00000590924 ABHD14A-ACY1A0A1B0GW23 586 aa20.58■□□□□ 0.89
VAT1-208ENST00000590924 SPATA31C2B4DYI2 1134 aa20.58■□□□□ 0.89
VAT1-208ENST00000590924 H3BRB1 525 aa20.58■□□□□ 0.89
VAT1-208ENST00000590924 MEIS2O14770 477 aa20.58■□□□□ 0.89
VAT1-208ENST00000590924 FIBPO43427 364 aa20.58■□□□□ 0.89
VAT1-208ENST00000590924 TLL1O43897 1013 aa20.58■□□□□ 0.89
VAT1-208ENST00000590924 ST18O60284 1047 aa20.58■□□□□ 0.89
VAT1-208ENST00000590924 EFCAB14O75071 495 aa20.58■□□□□ 0.89
VAT1-208ENST00000590924 LGALS2P05162 132 aa20.58■□□□□ 0.89
VAT1-208ENST00000590924 SEMA3FQ13275 785 aa20.58■□□□□ 0.89
VAT1-208ENST00000590924 ZNF618Q5T7W0 954 aa20.58■□□□□ 0.89
VAT1-208ENST00000590924 PCNX4Q63HM2 1172 aa20.58■□□□□ 0.89
VAT1-208ENST00000590924 XRRA1Q6P2D8 792 aa20.58■□□□□ 0.89
VAT1-208ENST00000590924 METTL7BQ6UX53 244 aa20.58■□□□□ 0.89
VAT1-208ENST00000590924 TMTC3Q6ZXV5 915 aa20.58■□□□□ 0.89
VAT1-208ENST00000590924 SERINC5Q86VE9 423 aa20.58■□□□□ 0.89
VAT1-208ENST00000590924 SMARCC2Q8TAQ2 1214 aa20.58■□□□□ 0.89
VAT1-208ENST00000590924 CUL5Q93034 780 aa20.58■□□□□ 0.89
VAT1-208ENST00000590924 TUT1Q9H6E5 874 aaKnown RBP20.58■□□□□ 0.89
VAT1-208ENST00000590924 FAM217BQ9NTX9 383 aaPredicted RBP20.58■□□□□ 0.89
VAT1-208ENST00000590924 NAP1L2Q9ULW6 460 aaPredicted RBP20.58■□□□□ 0.89
VAT1-208ENST00000590924 LOXHD1Q8IVV2 1947 aa20.57■□□□□ 0.88
VAT1-208ENST00000590924 NOP56O00567 594 aaKnown RBP20.57■□□□□ 0.88
VAT1-208ENST00000590924 ARHGEF15O94989 841 aa20.57■□□□□ 0.88
VAT1-208ENST00000590924 PLEKHA8P1O95397 391 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms