RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 PRPHP41219 470 aa13.64□□□□□ -0.23
APOC1-206ENST00000590334 NASPP49321 788 aaPredicted RBP13.64□□□□□ -0.23
APOC1-206ENST00000590334 ATP2C1P98194 919 aaPredicted RBP13.64□□□□□ -0.23
APOC1-206ENST00000590334 ARHGAP1Q07960 439 aa13.64□□□□□ -0.23
APOC1-206ENST00000590334 PTGDRQ13258 359 aa13.64□□□□□ -0.23
APOC1-206ENST00000590334 LAMC2Q13753 1193 aa13.64□□□□□ -0.23
APOC1-206ENST00000590334 PTPAQ15257 358 aa13.64□□□□□ -0.23
APOC1-206ENST00000590334 MTFR1Q15390 333 aa13.64□□□□□ -0.23
APOC1-206ENST00000590334 SF3A1Q15459 793 aaKnown RBP13.64□□□□□ -0.23
APOC1-206ENST00000590334 ANO1Q5XXA6 986 aa13.64□□□□□ -0.23
APOC1-206ENST00000590334 METTL7BQ6UX53 244 aa13.64□□□□□ -0.23
APOC1-206ENST00000590334 B3GNT9Q6UX72 402 aa13.64□□□□□ -0.23
APOC1-206ENST00000590334 USP28Q96RU2 1077 aa13.64□□□□□ -0.23
APOC1-206ENST00000590334 UPF3AQ9H1J1 476 aaKnown RBP13.64□□□□□ -0.23
APOC1-206ENST00000590334 BCAS3Q9H6U6 928 aa13.64□□□□□ -0.23
APOC1-206ENST00000590334 CEP131Q9UPN4 1083 aa13.64□□□□□ -0.23
APOC1-206ENST00000590334 CLIC4Q9Y696 253 aa13.64□□□□□ -0.23
APOC1-206ENST00000590334 MYH9P35579 1960 aaKnown RBP13.63□□□□□ -0.23
APOC1-206ENST00000590334 FARP2O94887 1054 aaPredicted RBP13.63□□□□□ -0.23
APOC1-206ENST00000590334 GGPS1O95749 300 aa13.63□□□□□ -0.23
APOC1-206ENST00000590334 OR52Z1P0C646 297 aa13.63□□□□□ -0.23
APOC1-206ENST00000590334 RARBP10826 455 aa13.63□□□□□ -0.23
APOC1-206ENST00000590334 GJA9P57773 515 aa13.63□□□□□ -0.23
APOC1-206ENST00000590334 GJC2Q5T442 439 aaPredicted RBP13.63□□□□□ -0.23
APOC1-206ENST00000590334 LRCH2Q5VUJ6 765 aa13.63□□□□□ -0.23
APOC1-206ENST00000590334 ARL6IP4Q66PJ3 421 aaKnown RBP13.63□□□□□ -0.23
APOC1-206ENST00000590334 CYFIP1Q7L576 1253 aa13.63□□□□□ -0.23
APOC1-206ENST00000590334 TLK2Q86UE8 772 aa13.63□□□□□ -0.23
APOC1-206ENST00000590334 DHX37Q8IY37 1157 aaKnown RBP13.63□□□□□ -0.23
APOC1-206ENST00000590334 COPS5Q92905 334 aa13.63□□□□□ -0.23
APOC1-206ENST00000590334 SDF4Q9BRK5 362 aa13.63□□□□□ -0.23
APOC1-206ENST00000590334 FTOQ9C0B1 505 aaKnown RBP eCLIP13.63□□□□□ -0.23
APOC1-206ENST00000590334 VAV3Q9UKW4 847 aa13.63□□□□□ -0.23
APOC1-206ENST00000590334 CFAP45Q9UL16 551 aa13.63□□□□□ -0.23
APOC1-206ENST00000590334 SYNRGQ9UMZ2 1314 aa13.63□□□□□ -0.23
APOC1-206ENST00000590334 A6NJR5 290 aa13.62□□□□□ -0.23
APOC1-206ENST00000590334 CTAGE5O15320 804 aa13.62□□□□□ -0.23
APOC1-206ENST00000590334 GAS7O60861 476 aa13.62□□□□□ -0.23
APOC1-206ENST00000590334 ADAMTS4O75173 837 aa13.62□□□□□ -0.23
APOC1-206ENST00000590334 YEATS4O95619 227 aa13.62□□□□□ -0.23
APOC1-206ENST00000590334 CAPN2P17655 700 aa13.62□□□□□ -0.23
APOC1-206ENST00000590334 KRT76Q01546 638 aa13.62□□□□□ -0.23
APOC1-206ENST00000590334 DNM1Q05193 864 aaKnown RBP13.62□□□□□ -0.23
APOC1-206ENST00000590334 SPIRE1Q08AE8 756 aa13.62□□□□□ -0.23
APOC1-206ENST00000590334 PPP2R5CQ13362 524 aa13.62□□□□□ -0.23
APOC1-206ENST00000590334 SLC39A14Q15043 492 aa13.62□□□□□ -0.23
APOC1-206ENST00000590334 ZNF746Q6NUN9 644 aaPredicted RBP13.62□□□□□ -0.23
APOC1-206ENST00000590334 LINC00301Q8NCQ3 95 aa13.62□□□□□ -0.23
APOC1-206ENST00000590334 OR6J1Q8NGC5 347 aa13.62□□□□□ -0.23
APOC1-206ENST00000590334 PPTC7Q8NI37 304 aa13.62□□□□□ -0.23
APOC1-206ENST00000590334 LENG1Q96BZ8 264 aaPredicted RBP13.62□□□□□ -0.23
APOC1-206ENST00000590334 TEKT3Q9BXF9 490 aa13.62□□□□□ -0.23
APOC1-206ENST00000590334 RNF208Q9H0X6 261 aa13.62□□□□□ -0.23
APOC1-206ENST00000590334 TTC12Q9H892 705 aaPredicted RBP13.62□□□□□ -0.23
APOC1-206ENST00000590334 MLXIPQ9HAP2 919 aa13.62□□□□□ -0.23
APOC1-206ENST00000590334 JPH1Q9HDC5 661 aaPredicted RBP13.62□□□□□ -0.23
APOC1-206ENST00000590334 XPNPEP3Q9NQH7 507 aa13.62□□□□□ -0.23
APOC1-206ENST00000590334 TFIP11Q9UBB9 837 aaKnown RBP13.62□□□□□ -0.23
APOC1-206ENST00000590334 SLC9A2Q9UBY0 812 aa13.62□□□□□ -0.23
APOC1-206ENST00000590334 PCDHA12Q9UN75 941 aa13.62□□□□□ -0.23
APOC1-206ENST00000590334 LOXHD1Q8IVV2 1947 aa13.62□□□□□ -0.23
APOC1-206ENST00000590334 DYNC1LI2O43237 492 aaPredicted RBP13.61□□□□□ -0.23
APOC1-206ENST00000590334 ATG7O95352 703 aa13.61□□□□□ -0.23
APOC1-206ENST00000590334 GJB1P08034 283 aa13.61□□□□□ -0.23
APOC1-206ENST00000590334 HOXD8P13378 290 aaPredicted RBP13.61□□□□□ -0.23
APOC1-206ENST00000590334 PTGS1P23219 599 aa13.61□□□□□ -0.23
APOC1-206ENST00000590334 CST5P28325 142 aaPredicted RBP13.61□□□□□ -0.23
APOC1-206ENST00000590334 FXR2P51116 673 aaKnown RBP eCLIP13.61□□□□□ -0.23
APOC1-206ENST00000590334 KRT85P78386 507 aa13.61□□□□□ -0.23
APOC1-206ENST00000590334 HSDL1Q3SXM5 330 aa13.61□□□□□ -0.23
APOC1-206ENST00000590334 COL13A1Q5TAT6 717 aaPredicted RBP13.61□□□□□ -0.23
APOC1-206ENST00000590334 KLHDC9Q8NEP7 349 aa13.61□□□□□ -0.23
APOC1-206ENST00000590334 GJA10Q969M2 543 aa13.61□□□□□ -0.23
APOC1-206ENST00000590334 GPR20Q99678 358 aa13.61□□□□□ -0.23
APOC1-206ENST00000590334 CRISPLD2Q9H0B8 497 aa13.61□□□□□ -0.23
APOC1-206ENST00000590334 AP5M1Q9H0R1 490 aa13.61□□□□□ -0.23
APOC1-206ENST00000590334 PKD2L1Q9P0L9 805 aa13.61□□□□□ -0.23
APOC1-206ENST00000590334 RCOR1Q9UKL0 485 aa13.61□□□□□ -0.23
APOC1-206ENST00000590334 ELP1O95163 1332 aa13.61□□□□□ -0.23
APOC1-206ENST00000590334 ARID2Q68CP9 1835 aa13.6□□□□□ -0.23
APOC1-206ENST00000590334 GSTTP1A0A1W2PQM5 241 aa13.6□□□□□ -0.23
APOC1-206ENST00000590334 MARCH6O60337 910 aa13.6□□□□□ -0.23
APOC1-206ENST00000590334 PPP6R2O75170 966 aa13.6□□□□□ -0.23
APOC1-206ENST00000590334 CCNE2O96020 404 aa13.6□□□□□ -0.23
APOC1-206ENST00000590334 SFNP31947 248 aa13.6□□□□□ -0.23
APOC1-206ENST00000590334 TXKP42681 527 aa13.6□□□□□ -0.23
APOC1-206ENST00000590334 CPT1AP50416 773 aa13.6□□□□□ -0.23
APOC1-206ENST00000590334 PDIA5Q14554 519 aa13.6□□□□□ -0.23
APOC1-206ENST00000590334 IL17AQ16552 155 aa13.6□□□□□ -0.23
APOC1-206ENST00000590334 FOXD4L6Q3SYB3 417 aaPredicted RBP13.6□□□□□ -0.23
APOC1-206ENST00000590334 CCSAPQ6IQ19 270 aaPredicted RBP13.6□□□□□ -0.23
APOC1-206ENST00000590334 FOXD4L3Q6VB84 417 aaPredicted RBP13.6□□□□□ -0.23
APOC1-206ENST00000590334 DTHD1Q6ZMT9 781 aa13.6□□□□□ -0.23
APOC1-206ENST00000590334 SMAP1Q8IYB5 467 aaPredicted RBP13.6□□□□□ -0.23
APOC1-206ENST00000590334 IGSF22Q8N9C0 903 aa13.6□□□□□ -0.23
APOC1-206ENST00000590334 RDM1Q8NG50 284 aa13.6□□□□□ -0.23
APOC1-206ENST00000590334 AFG1LQ8WV93 481 aa13.6□□□□□ -0.23
APOC1-206ENST00000590334 SPATA33Q96N06 139 aa13.6□□□□□ -0.23
APOC1-206ENST00000590334 DEFB118Q96PH6 123 aa13.6□□□□□ -0.23
APOC1-206ENST00000590334 UIMC1Q96RL1 719 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms