RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 CCDC196A0A1B0GTZ2 297 aa23.6■■□□□ 1.37
CIRBP-226ENST00000590171 RFC2P35250 354 aa23.6■■□□□ 1.37
CIRBP-226ENST00000590171 PBX2P40425 430 aa23.6■■□□□ 1.37
CIRBP-226ENST00000590171 ADCY7P51828 1080 aa23.6■■□□□ 1.37
CIRBP-226ENST00000590171 ZNF200P98182 395 aaPredicted RBP23.6■■□□□ 1.37
CIRBP-226ENST00000590171 CCDC155Q8N6L0 562 aa23.6■■□□□ 1.37
CIRBP-226ENST00000590171 PGBD1Q96JS3 809 aa23.6■■□□□ 1.37
CIRBP-226ENST00000590171 PBX4Q9BYU1 374 aa23.6■■□□□ 1.37
CIRBP-226ENST00000590171 SMCO2A6NFE2 343 aa23.59■■□□□ 1.37
CIRBP-226ENST00000590171 H3BRB1 525 aa23.59■■□□□ 1.37
CIRBP-226ENST00000590171 ATP9AO75110 1047 aa23.59■■□□□ 1.37
CIRBP-226ENST00000590171 KCNA2P16389 499 aa23.59■■□□□ 1.37
CIRBP-226ENST00000590171 SP4Q02446 784 aa23.59■■□□□ 1.37
CIRBP-226ENST00000590171 RBL2Q08999 1139 aa23.59■■□□□ 1.37
CIRBP-226ENST00000590171 PFKFB3Q16875 520 aaPredicted RBP23.59■■□□□ 1.37
CIRBP-226ENST00000590171 TEX2Q8IWB9 1127 aa23.59■■□□□ 1.37
CIRBP-226ENST00000590171 AFAP1L1Q8TED9 768 aa23.59■■□□□ 1.37
CIRBP-226ENST00000590171 CDHR1Q96JP9 859 aa23.59■■□□□ 1.37
CIRBP-226ENST00000590171 CDX2Q99626 313 aaPredicted RBP23.59■■□□□ 1.37
CIRBP-226ENST00000590171 TUT1Q9H6E5 874 aaKnown RBP23.59■■□□□ 1.37
CIRBP-226ENST00000590171 EHMT1Q9H9B1 1298 aa23.59■■□□□ 1.37
CIRBP-226ENST00000590171 ZSWIM6Q9HCJ5 1215 aa23.59■■□□□ 1.37
CIRBP-226ENST00000590171 PTK7Q13308 1070 aa23.58■■□□□ 1.37
CIRBP-226ENST00000590171 MTMR1Q13613 665 aa23.58■■□□□ 1.37
CIRBP-226ENST00000590171 RUFY3Q7L099 469 aa23.58■■□□□ 1.37
CIRBP-226ENST00000590171 TRIM50Q86XT4 487 aa23.58■■□□□ 1.37
CIRBP-226ENST00000590171 WNT8BQ93098 351 aa23.58■■□□□ 1.37
CIRBP-226ENST00000590171 TIFAQ96CG3 184 aa23.58■■□□□ 1.37
CIRBP-226ENST00000590171 JADE2Q9NQC1 790 aa23.58■■□□□ 1.37
CIRBP-226ENST00000590171 ZBBXA8MT70 800 aa23.57■■□□□ 1.36
CIRBP-226ENST00000590171 SCG2P13521 617 aa23.57■■□□□ 1.36
CIRBP-226ENST00000590171 SELPP16109 830 aa23.57■■□□□ 1.36
CIRBP-226ENST00000590171 CLK2P49760 499 aaKnown RBP23.57■■□□□ 1.36
CIRBP-226ENST00000590171 EVCP57679 992 aa23.57■■□□□ 1.36
CIRBP-226ENST00000590171 LRRC8DQ7L1W4 858 aa23.57■■□□□ 1.36
CIRBP-226ENST00000590171 GIMAP8Q8ND71 665 aaPredicted RBP23.57■■□□□ 1.36
CIRBP-226ENST00000590171 ANO3Q9BYT9 981 aa23.57■■□□□ 1.36
CIRBP-226ENST00000590171 TMEM260Q9NX78 707 aa23.57■■□□□ 1.36
CIRBP-226ENST00000590171 PKD2L1Q9P0L9 805 aa23.57■■□□□ 1.36
CIRBP-226ENST00000590171 SCN5AQ14524 2016 aa23.57■■□□□ 1.36
CIRBP-226ENST00000590171 FOSP01100 380 aaPredicted RBP23.56■■□□□ 1.36
CIRBP-226ENST00000590171 CKBP12277 381 aa23.56■■□□□ 1.36
CIRBP-226ENST00000590171 PDIA3P30101 505 aaKnown RBP23.56■■□□□ 1.36
CIRBP-226ENST00000590171 HOXC8P31273 242 aa23.56■■□□□ 1.36
CIRBP-226ENST00000590171 TOB2Q14106 344 aaPredicted RBP23.56■■□□□ 1.36
CIRBP-226ENST00000590171 GPNMBQ14956 572 aa23.56■■□□□ 1.36
CIRBP-226ENST00000590171 NTRK3Q16288 839 aa23.56■■□□□ 1.36
CIRBP-226ENST00000590171 PKN1Q16512 942 aa23.56■■□□□ 1.36
CIRBP-226ENST00000590171 TRIM71Q2Q1W2 868 aaKnown RBP23.56■■□□□ 1.36
CIRBP-226ENST00000590171 UTP14CQ5TAP6 766 aaKnown RBP23.56■■□□□ 1.36
CIRBP-226ENST00000590171 PHKBQ93100 1093 aa23.56■■□□□ 1.36
CIRBP-226ENST00000590171 SLC4A7Q9Y6M7 1214 aa23.56■■□□□ 1.36
CIRBP-226ENST00000590171 DOCK5Q9H7D0 1870 aa23.56■■□□□ 1.36
CIRBP-226ENST00000590171 C17orf102A2RUQ5 167 aa23.55■■□□□ 1.36
CIRBP-226ENST00000590171 PRPF3O43395 683 aaKnown RBP23.55■■□□□ 1.36
CIRBP-226ENST00000590171 SMIM10L2AP0DMW4 78 aa23.55■■□□□ 1.36
CIRBP-226ENST00000590171 SMIM10L2BP0DMW5 78 aa23.55■■□□□ 1.36
CIRBP-226ENST00000590171 AP3B2Q13367 1082 aa23.55■■□□□ 1.36
CIRBP-226ENST00000590171 MYLIPQ8WY64 445 aa23.55■■□□□ 1.36
CIRBP-226ENST00000590171 MXRA8Q9BRK3 442 aa23.55■■□□□ 1.36
CIRBP-226ENST00000590171 FTOQ9C0B1 505 aaKnown RBP eCLIP23.55■■□□□ 1.368e-7■□□□□ 9.3
CIRBP-226ENST00000590171 GLT8D2Q9H1C3 349 aa23.55■■□□□ 1.36
CIRBP-226ENST00000590171 ZNF576Q9H609 170 aa23.55■■□□□ 1.36
CIRBP-226ENST00000590171 CYP46A1Q9Y6A2 500 aa23.55■■□□□ 1.36
CIRBP-226ENST00000590171 MAFGO15525 162 aa23.54■■□□□ 1.36
CIRBP-226ENST00000590171 PPFIA3O75145 1194 aa23.54■■□□□ 1.36
CIRBP-226ENST00000590171 CENPBP07199 599 aaPredicted RBP23.54■■□□□ 1.36
CIRBP-226ENST00000590171 ACTN1P12814 892 aa23.54■■□□□ 1.36
CIRBP-226ENST00000590171 TCF7P36402 384 aaPredicted RBP23.54■■□□□ 1.36
CIRBP-226ENST00000590171 CCT2P78371 535 aaKnown RBP23.54■■□□□ 1.36
CIRBP-226ENST00000590171 GRIN2CQ14957 1233 aa23.54■■□□□ 1.36
CIRBP-226ENST00000590171 RAB30Q15771 203 aa23.54■■□□□ 1.36
CIRBP-226ENST00000590171 TRAF7Q6Q0C0 670 aa23.54■■□□□ 1.36
CIRBP-226ENST00000590171 SERINC5Q86VE9 423 aa23.54■■□□□ 1.36
CIRBP-226ENST00000590171 CYP2W1Q8TAV3 490 aa23.54■■□□□ 1.36
CIRBP-226ENST00000590171 UPF3BQ9BZI7 483 aaKnown RBP23.54■■□□□ 1.36
CIRBP-226ENST00000590171 TM6SF1Q9BZW5 370 aa23.54■■□□□ 1.36
CIRBP-226ENST00000590171 RNPEPQ9H4A4 650 aa23.54■■□□□ 1.36
CIRBP-226ENST00000590171 NCOA5Q9HCD5 579 aaKnown RBP23.54■■□□□ 1.36
CIRBP-226ENST00000590171 ZNF215Q9UL58 517 aaPredicted RBP23.54■■□□□ 1.36
CIRBP-226ENST00000590171 COL6A3P12111 3177 aa23.53■■□□□ 1.36
CIRBP-226ENST00000590171 ESYT2A0FGR8 921 aa23.53■■□□□ 1.36
CIRBP-226ENST00000590171 ADAMTS3O15072 1205 aa23.53■■□□□ 1.36
CIRBP-226ENST00000590171 SREBF1P36956 1147 aa23.53■■□□□ 1.36
CIRBP-226ENST00000590171 RNF26Q9BY78 433 aaPredicted RBP23.53■■□□□ 1.36
CIRBP-226ENST00000590171 ZMYND12Q9H0C1 365 aa23.53■■□□□ 1.36
CIRBP-226ENST00000590171 KCNH7Q9NS40 1196 aa23.53■■□□□ 1.36
CIRBP-226ENST00000590171 MSRAQ9UJ68 235 aa23.53■■□□□ 1.36
CIRBP-226ENST00000590171 YBX2Q9Y2T7 364 aaKnown RBP23.53■■□□□ 1.36
CIRBP-226ENST00000590171 GSTTP1A0A1W2PQM5 241 aa23.52■■□□□ 1.36
CIRBP-226ENST00000590171 RBAK-RBAKDNI3L0D1 243 aa23.52■■□□□ 1.36
CIRBP-226ENST00000590171 NBNO60934 754 aa23.52■■□□□ 1.36
CIRBP-226ENST00000590171 ATP2A2P16615 1042 aaKnown RBP23.52■■□□□ 1.36
CIRBP-226ENST00000590171 IFNAR1P17181 557 aa23.52■■□□□ 1.36
CIRBP-226ENST00000590171 RABGGTBP53611 331 aa23.52■■□□□ 1.36
CIRBP-226ENST00000590171 ZNF618Q5T7W0 954 aa23.52■■□□□ 1.36
CIRBP-226ENST00000590171 JAKMIP3Q5VZ66 844 aa23.52■■□□□ 1.36
CIRBP-226ENST00000590171 SEPT1Q8WYJ6 367 aa23.52■■□□□ 1.36
CIRBP-226ENST00000590171 ATP6V0A1Q93050 837 aa23.52■■□□□ 1.36
CIRBP-226ENST00000590171 NKX2-4Q9H2Z4 354 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms