RNA–Protein interactions for RNA: ENST00000590116.5

ZNF554-203, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 2,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-203ENST00000590116 SERPINB13Q9UIV8 391 aa23.04■■□□□ 1.28
ZNF554-203ENST00000590116 KIAA1024Q9UPX6 916 aa23.04■■□□□ 1.28
ZNF554-203ENST00000590116 TLR2O60603 784 aa23.04■■□□□ 1.28
ZNF554-203ENST00000590116 NOL4O94818 638 aa23.04■■□□□ 1.28
ZNF554-203ENST00000590116 TCP1P17987 556 aaKnown RBP23.04■■□□□ 1.28
ZNF554-203ENST00000590116 STAT3P40763 770 aa23.04■■□□□ 1.28
ZNF554-203ENST00000590116 CCDC181Q5TID7 509 aa23.04■■□□□ 1.28
ZNF554-203ENST00000590116 PODXL2Q9NZ53 605 aa23.04■■□□□ 1.28
ZNF554-203ENST00000590116 BBOX1O75936 387 aa23.03■■□□□ 1.28
ZNF554-203ENST00000590116 SHMT1P34896 483 aa23.03■■□□□ 1.28
ZNF554-203ENST00000590116 MRPL12P52815 198 aaKnown RBP23.03■■□□□ 1.28
ZNF554-203ENST00000590116 SND1Q7KZF4 910 aaKnown RBP eCLIP23.03■■□□□ 1.28
ZNF554-203ENST00000590116 AENQ8WTP8 325 aaKnown RBP23.03■■□□□ 1.28
ZNF554-203ENST00000590116 PSTPIP2Q9H939 334 aa23.03■■□□□ 1.28
ZNF554-203ENST00000590116 FAM184BQ9ULE4 1060 aa23.03■■□□□ 1.28
ZNF554-203ENST00000590116 FAM196BA6NMK8 535 aa23.03■■□□□ 1.28
ZNF554-203ENST00000590116 POLR2FP61218 127 aaKnown RBP23.03■■□□□ 1.28
ZNF554-203ENST00000590116 ZNF572Q7Z3I7 529 aaPredicted RBP23.03■■□□□ 1.28
ZNF554-203ENST00000590116 ZHX3Q9H4I2 956 aa23.03■■□□□ 1.28
ZNF554-203ENST00000590116 BMP2KQ9NSY1 1161 aaPredicted RBP23.03■■□□□ 1.28
ZNF554-203ENST00000590116 LTBP4Q8N2S1 1624 aa23.03■■□□□ 1.28
ZNF554-203ENST00000590116 TRIM66O15016 1216 aa23.02■■□□□ 1.28
ZNF554-203ENST00000590116 PJA2O43164 708 aa23.02■■□□□ 1.28
ZNF554-203ENST00000590116 IVLP07476 585 aa23.02■■□□□ 1.28
ZNF554-203ENST00000590116 LRRC31Q6UY01 552 aa23.02■■□□□ 1.28
ZNF554-203ENST00000590116 TLR10Q9BXR5 811 aa23.02■■□□□ 1.28
ZNF554-203ENST00000590116 MYH4Q9Y623 1939 aa23.02■■□□□ 1.28
ZNF554-203ENST00000590116 SSU72P8A0A1W2PR75 194 aa23.02■■□□□ 1.28
ZNF554-203ENST00000590116 ZBTB5O15062 677 aa23.02■■□□□ 1.28
ZNF554-203ENST00000590116 ITIH3Q06033 890 aa23.02■■□□□ 1.28
ZNF554-203ENST00000590116 FAM83BQ5T0W9 1011 aa23.02■■□□□ 1.28
ZNF554-203ENST00000590116 NOX5Q96PH1 765 aa23.02■■□□□ 1.28
ZNF554-203ENST00000590116 EDEM3Q9BZQ6 932 aa23.02■■□□□ 1.28
ZNF554-203ENST00000590116 USP40Q9NVE5 1235 aa23.02■■□□□ 1.28
ZNF554-203ENST00000590116 CEP72Q9P209 647 aa23.02■■□□□ 1.28
ZNF554-203ENST00000590116 MAPK8IP2Q13387 824 aaPredicted RBP23.01■■□□□ 1.27
ZNF554-203ENST00000590116 SEPT2Q15019 361 aa23.01■■□□□ 1.27
ZNF554-203ENST00000590116 SLC9C1Q4G0N8 1177 aa23.01■■□□□ 1.27
ZNF554-203ENST00000590116 KLHDC7AQ5VTJ3 777 aa23.01■■□□□ 1.27
ZNF554-203ENST00000590116 GPBP1Q86WP2 473 aa23.01■■□□□ 1.27
ZNF554-203ENST00000590116 RBM12Q9NTZ6 932 aaKnown RBP23.01■■□□□ 1.27
ZNF554-203ENST00000590116 GOLGA6BA6NDN3 693 aa23.01■■□□□ 1.27
ZNF554-203ENST00000590116 HOXA7P31268 230 aaPredicted RBP23.01■■□□□ 1.27
ZNF554-203ENST00000590116 SKIDA1Q1XH10 827 aa23.01■■□□□ 1.27
ZNF554-203ENST00000590116 SFMBT2Q5VUG0 894 aa23.01■■□□□ 1.27
ZNF554-203ENST00000590116 HAUS3Q68CZ6 603 aa23.01■■□□□ 1.27
ZNF554-203ENST00000590116 FOXR2Q6PJQ5 311 aa23.01■■□□□ 1.27
ZNF554-203ENST00000590116 NT5C3AQ9H0P0 336 aa23.01■■□□□ 1.27
ZNF554-203ENST00000590116 RPS6KA5O75582 802 aa23■■□□□ 1.27
ZNF554-203ENST00000590116 PLA2G4BP0C869 781 aa23■■□□□ 1.27
ZNF554-203ENST00000590116 DDR1Q08345 913 aa23■■□□□ 1.27
ZNF554-203ENST00000590116 NFIAQ12857 509 aa23■■□□□ 1.27
ZNF554-203ENST00000590116 USP21Q9UK80 565 aa23■■□□□ 1.27
ZNF554-203ENST00000590116 KDM3AQ9Y4C1 1321 aa23■■□□□ 1.27
ZNF554-203ENST00000590116 FTCDO95954 541 aa23■■□□□ 1.27
ZNF554-203ENST00000590116 GCFC2P16383 781 aaKnown RBP23■■□□□ 1.27
ZNF554-203ENST00000590116 TAL1P17542 331 aaPredicted RBP23■■□□□ 1.27
ZNF554-203ENST00000590116 SNAP25P60880 206 aa23■■□□□ 1.27
ZNF554-203ENST00000590116 DOK7Q18PE1 504 aa23■■□□□ 1.27
ZNF554-203ENST00000590116 HERC4Q5GLZ8 1057 aaPredicted RBP23■■□□□ 1.27
ZNF554-203ENST00000590116 GPATCH4Q5T3I0 446 aaKnown RBP23■■□□□ 1.27
ZNF554-203ENST00000590116 ZFPM1Q8IX07 1006 aa23■■□□□ 1.27
ZNF554-203ENST00000590116 FEZ2Q9UHY8 353 aaPredicted RBP23■■□□□ 1.27
ZNF554-203ENST00000590116 PACSIN2Q9UNF0 486 aaPredicted RBP23■■□□□ 1.27
ZNF554-203ENST00000590116 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23■■□□□ 1.27
ZNF554-203ENST00000590116 POTEFA5A3E0 1075 aa22.99■■□□□ 1.27
ZNF554-203ENST00000590116 POTEIP0CG38 1075 aa22.99■■□□□ 1.27
ZNF554-203ENST00000590116 PAFAH1B1P43034 410 aa22.99■■□□□ 1.27
ZNF554-203ENST00000590116 RAPGEF1Q13905 1077 aa22.99■■□□□ 1.27
ZNF554-203ENST00000590116 POTEGQ6S5H5 508 aa22.99■■□□□ 1.27
ZNF554-203ENST00000590116 POTEEQ6S8J3 1075 aa22.99■■□□□ 1.27
ZNF554-203ENST00000590116 CCDC65Q8IXS2 484 aa22.99■■□□□ 1.27
ZNF554-203ENST00000590116 SCFD1Q8WVM8 642 aa22.99■■□□□ 1.27
ZNF554-203ENST00000590116 PACSIN1Q9BY11 444 aa22.99■■□□□ 1.27
ZNF554-203ENST00000590116 SWAP70Q9UH65 585 aa22.99■■□□□ 1.27
ZNF554-203ENST00000590116 PCDHA2Q9Y5H9 948 aa22.99■■□□□ 1.27
ZNF554-203ENST00000590116 SERPING1P05155 500 aa22.99■■□□□ 1.27
ZNF554-203ENST00000590116 CACNB3P54284 484 aa22.99■■□□□ 1.27
ZNF554-203ENST00000590116 C10orf67Q8IYJ2 551 aa22.99■■□□□ 1.27
ZNF554-203ENST00000590116 RRP15Q9Y3B9 282 aaKnown RBP22.99■■□□□ 1.27
ZNF554-203ENST00000590116 RBAK-RBAKDNI3L0D1 243 aa22.98■■□□□ 1.27
ZNF554-203ENST00000590116 MYO1CO00159 1063 aa22.98■■□□□ 1.27
ZNF554-203ENST00000590116 MED24O75448 989 aa22.98■■□□□ 1.27
ZNF554-203ENST00000590116 ADRA2BP18089 450 aa22.98■■□□□ 1.27
ZNF554-203ENST00000590116 CASP5P51878 434 aa22.98■■□□□ 1.27
ZNF554-203ENST00000590116 HYIQ5T013 277 aa22.98■■□□□ 1.27
ZNF554-203ENST00000590116 SRLQ86TD4 932 aa22.98■■□□□ 1.27
ZNF554-203ENST00000590116 DNAAF5Q86Y56 855 aa22.98■■□□□ 1.27
ZNF554-203ENST00000590116 FAM133AQ8N9E0 248 aa22.98■■□□□ 1.27
ZNF554-203ENST00000590116 TBC1D5Q92609 795 aa22.98■■□□□ 1.27
ZNF554-203ENST00000590116 CEP63Q96MT8 703 aa22.98■■□□□ 1.27
ZNF554-203ENST00000590116 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.98■■□□□ 1.27
ZNF554-203ENST00000590116 STIM2Q9P246 746 aa22.98■■□□□ 1.27
ZNF554-203ENST00000590116 ANKRD65E5RJM6 399 aa22.98■■□□□ 1.27
ZNF554-203ENST00000590116 PALMO75781 387 aa22.98■■□□□ 1.27
ZNF554-203ENST00000590116 QRICH1Q2TAL8 776 aa22.98■■□□□ 1.27
ZNF554-203ENST00000590116 TRIM59Q8IWR1 403 aa22.98■■□□□ 1.27
ZNF554-203ENST00000590116 RNF10Q8N5U6 811 aaKnown RBP22.98■■□□□ 1.27
ZNF554-203ENST00000590116 TSEN2Q8NCE0 465 aaKnown RBP22.98■■□□□ 1.27
ZNF554-203ENST00000590116 NUCKS1Q9H1E3 243 aaKnown RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms