RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 HSP90AA2PQ14568 343 aaPredicted RBP11.1□□□□□ -0.63
VPS25-202ENST00000589219 ARHGEF6Q15052 776 aa11.1□□□□□ -0.63
VPS25-202ENST00000589219 DCAF15Q66K64 600 aa11.1□□□□□ -0.63
VPS25-202ENST00000589219 HAUS3Q68CZ6 603 aa11.1□□□□□ -0.63
VPS25-202ENST00000589219 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.1□□□□□ -0.63
VPS25-202ENST00000589219 SIAH1Q8IUQ4 282 aa11.1□□□□□ -0.63
VPS25-202ENST00000589219 REXO1L1PQ8IX06 675 aa11.1□□□□□ -0.63
VPS25-202ENST00000589219 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.1□□□□□ -0.63
VPS25-202ENST00000589219 ANKRD7Q92527 254 aa11.1□□□□□ -0.63
VPS25-202ENST00000589219 PLIN2Q99541 437 aa11.1□□□□□ -0.63
VPS25-202ENST00000589219 SRRTQ9BXP5 876 aaKnown RBP11.1□□□□□ -0.63
VPS25-202ENST00000589219 PDCL3Q9H2J4 239 aa11.1□□□□□ -0.63
VPS25-202ENST00000589219 L2HGDHQ9H9P8 463 aa11.1□□□□□ -0.63
VPS25-202ENST00000589219 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.1□□□□□ -0.63
VPS25-202ENST00000589219 GOPCQ9HD26 462 aa11.1□□□□□ -0.63
VPS25-202ENST00000589219 KCNMB3Q9NPA1 279 aa11.1□□□□□ -0.63
VPS25-202ENST00000589219 BLOC1S4Q9NUP1 217 aa11.1□□□□□ -0.63
VPS25-202ENST00000589219 TRIM49BA6NDI0 452 aa11.09□□□□□ -0.63
VPS25-202ENST00000589219 POTEMA6NI47 508 aa11.09□□□□□ -0.63
VPS25-202ENST00000589219 SPDYE3A6NKU9 549 aa11.09□□□□□ -0.63
VPS25-202ENST00000589219 RAD21O60216 631 aa11.09□□□□□ -0.63
VPS25-202ENST00000589219 TBC1D12O60347 775 aa11.09□□□□□ -0.63
VPS25-202ENST00000589219 PLA2G6O60733 806 aa11.09□□□□□ -0.63
VPS25-202ENST00000589219 SLU7O95391 586 aaKnown RBP11.09□□□□□ -0.63
VPS25-202ENST00000589219 GYPCP04921 128 aa11.09□□□□□ -0.63
VPS25-202ENST00000589219 GJA5P36382 358 aa11.09□□□□□ -0.63
VPS25-202ENST00000589219 SREBF1P36956 1147 aa11.09□□□□□ -0.63
VPS25-202ENST00000589219 ADKP55263 362 aaKnown RBP11.09□□□□□ -0.63
VPS25-202ENST00000589219 LRRC63Q05C16 580 aa11.09□□□□□ -0.63
VPS25-202ENST00000589219 RBL2Q08999 1139 aa11.09□□□□□ -0.63
VPS25-202ENST00000589219 GOLGA8FQ08AF8 430 aa11.09□□□□□ -0.63
VPS25-202ENST00000589219 GOLGA8DPQ0D2H9 430 aa11.09□□□□□ -0.63
VPS25-202ENST00000589219 IKQ13123 557 aaPredicted RBP11.09□□□□□ -0.63
VPS25-202ENST00000589219 CRHR2Q13324 411 aa11.09□□□□□ -0.63
VPS25-202ENST00000589219 VGLL4Q14135 290 aa11.09□□□□□ -0.63
VPS25-202ENST00000589219 Q4G0T1 1027 aa11.09□□□□□ -0.63
VPS25-202ENST00000589219 TMTC1Q8IUR5 882 aa11.09□□□□□ -0.63
VPS25-202ENST00000589219 GUF1Q8N442 669 aaKnown RBP11.09□□□□□ -0.63
VPS25-202ENST00000589219 CSGALNACT2Q8N6G5 542 aa11.09□□□□□ -0.63
VPS25-202ENST00000589219 ERMNQ8TAM6 284 aa11.09□□□□□ -0.63
VPS25-202ENST00000589219 CRYGNQ8WXF5 182 aa11.09□□□□□ -0.63
VPS25-202ENST00000589219 HAS1Q92839 578 aa11.09□□□□□ -0.63
VPS25-202ENST00000589219 ZBTB21Q9ULJ3 1066 aa11.09□□□□□ -0.63
VPS25-202ENST00000589219 TRIM17Q9Y577 477 aa11.09□□□□□ -0.63
VPS25-202ENST00000589219 PDE4DIPQ5VU43 2346 aa11.09□□□□□ -0.63
VPS25-202ENST00000589219 MYMKA6NI61 221 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 PIK3CDO00329 1044 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 MEIS2O14770 477 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 CIITAP33076 1130 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 DNM2P50570 870 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 STAT2P52630 851 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 ARHGAP4P98171 946 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 SP3Q02447 781 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 UBXN1Q04323 297 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 MCM6Q14566 821 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 PTPN21Q16825 1174 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 SHROOM1Q2M3G4 852 aaPredicted RBP11.08□□□□□ -0.64
VPS25-202ENST00000589219 SYT10Q6XYQ8 523 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 OTOP1Q7RTM1 612 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 FAM160B2Q86V87 743 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 ERO1BQ86YB8 467 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 IRF2BP1Q8IU81 584 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 CDAN1Q8IWY9 1227 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 PIP4P2Q8N4L2 257 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 KCTD17Q8N5Z5 321 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 MB21D1Q8N884 522 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 RETREG2Q8NC44 543 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 KIAA0895Q8NCT3 520 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 OTUD5Q96G74 571 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 MS4A4AQ96JQ5 239 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 CNOT6LQ96LI5 555 aaKnown RBP11.08□□□□□ -0.64
VPS25-202ENST00000589219 WRNIP1Q96S55 665 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 TSG101Q99816 390 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 PTPN18Q99952 460 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 DUSP9Q99956 384 aaKnown RBP11.08□□□□□ -0.64
VPS25-202ENST00000589219 NUP58Q9BVL2 599 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 VPS16Q9H269 839 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 EHMT1Q9H9B1 1298 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 ZFYVE28Q9HCC9 887 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 BMP2KQ9NSY1 1161 aaPredicted RBP11.08□□□□□ -0.64
VPS25-202ENST00000589219 ABHD10Q9NUJ1 306 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 DNAI1Q9UI46 699 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 PCDHA12Q9UN75 941 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 MAPK8IP1Q9UQF2 711 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 TMX2Q9Y320 296 aa11.08□□□□□ -0.64
VPS25-202ENST00000589219 CCL15-CCL14A0A0B4J2E2 113 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 SPDYE5A6NIY4 337 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 USP17L15C9J2P7 530 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 USP17L13C9JLJ4 530 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 USP17L11C9JVI0 530 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 USP17L18D6R9N7 530 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 USP17L22D6RA61 530 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 USP17L17D6RBQ6 530 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 USP17L19D6RCP7 530 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 USP17L20D6RJB6 530 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 KIF20AO95235 890 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 CYP3A4P08684 503 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 SLURP2P0DP57 97 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 CETPP11597 493 aa11.07□□□□□ -0.64
VPS25-202ENST00000589219 CASP14P31944 242 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms