RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 PDXDC1Q6P996 788 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 WDR59Q6PJI9 974 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 DYMQ7RTS9 669 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 GPBP1Q86WP2 473 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 FBXO11Q86XK2 927 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 FAM71BQ8TC56 605 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 CNKSR1Q969H4 720 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 EXOC4Q96A65 974 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 PKNOX2Q96KN3 472 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 NOX5Q96PH1 765 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 PURBQ96QR8 312 aaKnown RBP7.92□□□□□ -1.14
SPIDR-228ENST00000588781 FUT8Q9BYC5 575 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 UBXN6Q9BZV1 441 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 CPVLQ9H3G5 476 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 ARHGEF10LQ9HCE6 1279 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 DNM3Q9UQ16 869 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 SIK3Q9Y2K2 1263 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 RABGAP1Q9Y3P9 1069 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 HYOU1Q9Y4L1 999 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 PCDHA13Q9Y5I0 950 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 PCDHA1Q9Y5I3 950 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.92□□□□□ -1.14
SPIDR-228ENST00000588781 ATP8B3O60423 1300 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 NRXN2Q9P2S2 1712 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 POTEMA6NI47 508 aa7.91□□□□□ -1.14
SPIDR-228ENST00000588781 USP17L10C9JJH3 530 aa7.91□□□□□ -1.14
SPIDR-228ENST00000588781 H0YIN7 160 aa7.91□□□□□ -1.14
SPIDR-228ENST00000588781 KIF3CO14782 793 aa7.91□□□□□ -1.14
SPIDR-228ENST00000588781 SLC16A3O15427 465 aaKnown RBP7.91□□□□□ -1.14
SPIDR-228ENST00000588781 PPP1R12BO60237 982 aaPredicted RBP7.91□□□□□ -1.14
SPIDR-228ENST00000588781 CAPN15O75808 1086 aa7.91□□□□□ -1.14
SPIDR-228ENST00000588781 POLD1P28340 1107 aa7.91□□□□□ -1.14
SPIDR-228ENST00000588781 CIITAP33076 1130 aa7.91□□□□□ -1.14
SPIDR-228ENST00000588781 MAGEA1P43355 309 aa7.91□□□□□ -1.14
SPIDR-228ENST00000588781 MMP14P50281 582 aa7.91□□□□□ -1.14
SPIDR-228ENST00000588781 KIF11P52732 1056 aa7.91□□□□□ -1.14
SPIDR-228ENST00000588781 RBM5P52756 815 aaKnown RBP eCLIP7.91□□□□□ -1.14
SPIDR-228ENST00000588781 EIF6P56537 245 aaKnown RBP7.91□□□□□ -1.14
SPIDR-228ENST00000588781 IKQ13123 557 aaPredicted RBP7.91□□□□□ -1.14
SPIDR-228ENST00000588781 CDC37Q16543 378 aaPredicted RBP7.91□□□□□ -1.14
SPIDR-228ENST00000588781 UBE2SQ16763 222 aa7.91□□□□□ -1.14
SPIDR-228ENST00000588781 ABCB5Q2M3G0 1257 aa7.91□□□□□ -1.14
SPIDR-228ENST00000588781 GLE1Q53GS7 698 aaKnown RBP7.91□□□□□ -1.14
SPIDR-228ENST00000588781 HERC4Q5GLZ8 1057 aaPredicted RBP7.91□□□□□ -1.14
SPIDR-228ENST00000588781 BEND6Q5SZJ8 279 aaPredicted RBP7.91□□□□□ -1.14
SPIDR-228ENST00000588781 SYDE2Q5VT97 1194 aa7.91□□□□□ -1.14
SPIDR-228ENST00000588781 APOBEC3HQ6NTF7 200 aaKnown RBP7.91□□□□□ -1.14
SPIDR-228ENST00000588781 TATDN1Q6P1N9 297 aa7.91□□□□□ -1.14
SPIDR-228ENST00000588781 LRRC55Q6ZSA7 311 aa7.91□□□□□ -1.14
SPIDR-228ENST00000588781 RRAGAQ7L523 313 aa7.91□□□□□ -1.14
SPIDR-228ENST00000588781 ZNF572Q7Z3I7 529 aaPredicted RBP7.91□□□□□ -1.14
SPIDR-228ENST00000588781 FRMD5Q7Z6J6 570 aa7.91□□□□□ -1.14
SPIDR-228ENST00000588781 VPS36Q86VN1 386 aa7.91□□□□□ -1.14
SPIDR-228ENST00000588781 C2CD5Q86YS7 1000 aa7.91□□□□□ -1.14
SPIDR-228ENST00000588781 IRX2Q9BZI1 471 aaPredicted RBP7.91□□□□□ -1.14
SPIDR-228ENST00000588781 SH2D4AQ9H788 454 aa7.91□□□□□ -1.14
SPIDR-228ENST00000588781 ZSWIM4Q9H7M6 989 aa7.91□□□□□ -1.14
SPIDR-228ENST00000588781 ANKZF1Q9H8Y5 726 aa7.91□□□□□ -1.14
SPIDR-228ENST00000588781 KCNMB3Q9NPA1 279 aa7.91□□□□□ -1.14
SPIDR-228ENST00000588781 JADE2Q9NQC1 790 aa7.91□□□□□ -1.14
SPIDR-228ENST00000588781 DDX4Q9NQI0 724 aaKnown RBP7.91□□□□□ -1.14
SPIDR-228ENST00000588781 HERC5Q9UII4 1024 aaKnown RBP7.91□□□□□ -1.14
SPIDR-228ENST00000588781 PRDM4Q9UKN5 801 aa7.91□□□□□ -1.14
SPIDR-228ENST00000588781 REXO2Q9Y3B8 237 aaKnown RBP7.91□□□□□ -1.14
SPIDR-228ENST00000588781 UBE4BO95155 1302 aa7.91□□□□□ -1.14
SPIDR-228ENST00000588781 WDR90Q96KV7 1748 aa7.91□□□□□ -1.14
SPIDR-228ENST00000588781 GREB1LQ9C091 1923 aaPredicted RBP7.91□□□□□ -1.14
SPIDR-228ENST00000588781 FRMD3A2A2Y4 597 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 A6NNZ2 444 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 RNF225M0QZC1 329 aaPredicted RBP7.9□□□□□ -1.14
SPIDR-228ENST00000588781 TBCAO75347 108 aaKnown RBP7.9□□□□□ -1.14
SPIDR-228ENST00000588781 SEC31AO94979 1220 aaKnown RBP7.9□□□□□ -1.14
SPIDR-228ENST00000588781 CYP3A4P08684 503 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 RHOXF2BP0C7M4 288 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 BMP3P12645 472 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 EEF2P13639 858 aaKnown RBP7.9□□□□□ -1.14
SPIDR-228ENST00000588781 RPA1P27694 616 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 CYP2C19P33261 490 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 ZNF76P36508 570 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 SREBF1P36956 1147 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 EIF4A3P38919 411 aaKnown RBP7.9□□□□□ -1.14
SPIDR-228ENST00000588781 SCNN1DP51172 638 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 ARHGAP4P98171 946 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 ASIC2Q16515 512 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 DOK7Q18PE1 504 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 TUBB8Q3ZCM7 444 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 ZCWPW2Q504Y3 356 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 TDRD12Q587J7 1177 aaKnown RBP7.9□□□□□ -1.14
SPIDR-228ENST00000588781 BTNL9Q6UXG8 535 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 KCTD1Q719H9 257 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 ZC3H3Q8IXZ2 948 aaKnown RBP7.9□□□□□ -1.14
SPIDR-228ENST00000588781 MMGT1Q8N4V1 131 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 CERS5Q8N5B7 392 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 HAS1Q92839 578 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 VTI1AQ96AJ9 217 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 AKT1S1Q96B36 256 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 DNAJC19Q96DA6 116 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 RHOXF2Q9BQY4 288 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 CRACR2AQ9BSW2 395 aa7.9□□□□□ -1.14
SPIDR-228ENST00000588781 POLR3CQ9BUI4 534 aaPredicted RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms