RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 TREHO43280 583 aa17.79■□□□□ 0.44
IFT20-216ENST00000588477 CTSHP09668 335 aa17.79■□□□□ 0.44
IFT20-216ENST00000588477 PARP1P09874 1014 aaKnown RBP17.79■□□□□ 0.44
IFT20-216ENST00000588477 DIEXFQ68CQ4 756 aaKnown RBP17.79■□□□□ 0.44
IFT20-216ENST00000588477 ADHFE1Q8IWW8 467 aa17.79■□□□□ 0.44
IFT20-216ENST00000588477 KCNH6Q9H252 994 aa17.79■□□□□ 0.44
IFT20-216ENST00000588477 RNPEPQ9H4A4 650 aa17.79■□□□□ 0.44
IFT20-216ENST00000588477 TUT1Q9H6E5 874 aaKnown RBP17.79■□□□□ 0.44
IFT20-216ENST00000588477 MLXIPQ9HAP2 919 aa17.79■□□□□ 0.44
IFT20-216ENST00000588477 TRIM6-TRIM34B2RNG4 842 aa17.78■□□□□ 0.44
IFT20-216ENST00000588477 SMIM10L2AP0DMW4 78 aa17.78■□□□□ 0.44
IFT20-216ENST00000588477 SMIM10L2BP0DMW5 78 aa17.78■□□□□ 0.44
IFT20-216ENST00000588477 IRS1P35568 1242 aa17.78■□□□□ 0.44
IFT20-216ENST00000588477 COL19A1Q14993 1142 aa17.78■□□□□ 0.44
IFT20-216ENST00000588477 PGM5Q15124 567 aa17.78■□□□□ 0.44
IFT20-216ENST00000588477 STOX1Q6ZVD7 989 aa17.78■□□□□ 0.44
IFT20-216ENST00000588477 RPAINQ86UA6 219 aa17.78■□□□□ 0.44
IFT20-216ENST00000588477 ANKS1AQ92625 1134 aa17.78■□□□□ 0.44
IFT20-216ENST00000588477 GPKOWQ92917 476 aaPredicted RBP eCLIP17.78■□□□□ 0.44
IFT20-216ENST00000588477 ZSCAN10Q96SZ4 725 aaPredicted RBP17.78■□□□□ 0.44
IFT20-216ENST00000588477 AMNQ9BXJ7 453 aa17.78■□□□□ 0.44
IFT20-216ENST00000588477 IFIH1Q9BYX4 1025 aaKnown RBP17.78■□□□□ 0.44
IFT20-216ENST00000588477 B4E1Z4 1266 aa17.77■□□□□ 0.44
IFT20-216ENST00000588477 UBA1P22314 1058 aaKnown RBP17.77■□□□□ 0.44
IFT20-216ENST00000588477 HOXA13P31271 388 aaPredicted RBP17.77■□□□□ 0.44
IFT20-216ENST00000588477 HOXC8P31273 242 aa17.77■□□□□ 0.44
IFT20-216ENST00000588477 LTBRP36941 435 aa17.77■□□□□ 0.44
IFT20-216ENST00000588477 HFE2Q6ZVN8 426 aa17.77■□□□□ 0.44
IFT20-216ENST00000588477 VSIG10LQ86VR7 867 aa17.77■□□□□ 0.44
IFT20-216ENST00000588477 TICAM2Q86XR7 235 aa17.77■□□□□ 0.44
IFT20-216ENST00000588477 STAG2Q8N3U4 1231 aa17.77■□□□□ 0.44
IFT20-216ENST00000588477 ENAHQ8N8S7 591 aaPredicted RBP17.77■□□□□ 0.44
IFT20-216ENST00000588477 IL31RAQ8NI17 732 aa17.77■□□□□ 0.44
IFT20-216ENST00000588477 RILPL2Q969X0 211 aa17.77■□□□□ 0.44
IFT20-216ENST00000588477 UPF3BQ9BZI7 483 aaKnown RBP17.77■□□□□ 0.44
IFT20-216ENST00000588477 BCAS3Q9H6U6 928 aa17.77■□□□□ 0.44
IFT20-216ENST00000588477 MAP3K20Q9NYL2 800 aaKnown RBP17.77■□□□□ 0.44
IFT20-216ENST00000588477 LGALS2P05162 132 aa17.76■□□□□ 0.43
IFT20-216ENST00000588477 TGFB3P10600 412 aa17.76■□□□□ 0.43
IFT20-216ENST00000588477 CTNNB1P35222 781 aa17.76■□□□□ 0.43
IFT20-216ENST00000588477 MFAP1P55081 439 aaKnown RBP17.76■□□□□ 0.43
IFT20-216ENST00000588477 GHRHRQ02643 423 aa17.76■□□□□ 0.43
IFT20-216ENST00000588477 CLUL1Q15846 466 aa17.76■□□□□ 0.43
IFT20-216ENST00000588477 FIBCD1Q8N539 461 aa17.76■□□□□ 0.43
IFT20-216ENST00000588477 ZSWIM5Q9P217 1185 aa17.76■□□□□ 0.43
IFT20-216ENST00000588477 TTC3P53804 2025 aa17.76■□□□□ 0.43
IFT20-216ENST00000588477 NCK2O43639 380 aa17.75■□□□□ 0.43
IFT20-216ENST00000588477 PPP1R11O60927 126 aaPredicted RBP17.75■□□□□ 0.43
IFT20-216ENST00000588477 CAND2O75155 1236 aa17.75■□□□□ 0.43
IFT20-216ENST00000588477 DLX2Q07687 328 aaPredicted RBP17.75■□□□□ 0.43
IFT20-216ENST00000588477 APBB2Q92870 758 aa17.75■□□□□ 0.43
IFT20-216ENST00000588477 IL17RAQ96F46 866 aa17.75■□□□□ 0.43
IFT20-216ENST00000588477 SETD4Q9NVD3 440 aa17.75■□□□□ 0.43
IFT20-216ENST00000588477 PCDHA1Q9Y5I3 950 aa17.75■□□□□ 0.43
IFT20-216ENST00000588477 TECTAO75443 2155 aa17.74■□□□□ 0.43
IFT20-216ENST00000588477 C5orf67F2Z3F1 127 aa17.74■□□□□ 0.43
IFT20-216ENST00000588477 NOP56O00567 594 aaKnown RBP17.74■□□□□ 0.43
IFT20-216ENST00000588477 MBTPS2O43462 519 aa17.74■□□□□ 0.43
IFT20-216ENST00000588477 CCND2P30279 289 aa17.74■□□□□ 0.43
IFT20-216ENST00000588477 NT5C2P49902 561 aa17.74■□□□□ 0.43
IFT20-216ENST00000588477 HYAL1Q12794 435 aa17.74■□□□□ 0.43
IFT20-216ENST00000588477 SMAD2Q15796 467 aaKnown RBP17.74■□□□□ 0.43
IFT20-216ENST00000588477 CTC1Q2NKJ3 1217 aa17.74■□□□□ 0.43
IFT20-216ENST00000588477 MFSD14AQ96MC6 490 aa17.74■□□□□ 0.43
IFT20-216ENST00000588477 USP26Q9BXU7 913 aa17.74■□□□□ 0.43
IFT20-216ENST00000588477 MUTYHQ9UIF7 546 aa17.74■□□□□ 0.43
IFT20-216ENST00000588477 KLRF2D3W0D1 207 aa17.73■□□□□ 0.43
IFT20-216ENST00000588477 ZBTB5O15062 677 aa17.73■□□□□ 0.43
IFT20-216ENST00000588477 GRM6O15303 877 aa17.73■□□□□ 0.43
IFT20-216ENST00000588477 RB1P06400 928 aa17.73■□□□□ 0.43
IFT20-216ENST00000588477 GNAT1P11488 350 aa17.73■□□□□ 0.43
IFT20-216ENST00000588477 SDSP20132 328 aa17.73■□□□□ 0.43
IFT20-216ENST00000588477 BMPR1AP36894 532 aa17.73■□□□□ 0.43
IFT20-216ENST00000588477 FCHSD1Q86WN1 690 aa17.73■□□□□ 0.43
IFT20-216ENST00000588477 SAMD3Q8N6K7 520 aa17.73■□□□□ 0.43
IFT20-216ENST00000588477 POP1Q99575 1024 aaKnown RBP17.73■□□□□ 0.43
IFT20-216ENST00000588477 LMAN2LQ9H0V9 348 aa17.73■□□□□ 0.43
IFT20-216ENST00000588477 IGFLR1Q9H665 355 aa17.73■□□□□ 0.43
IFT20-216ENST00000588477 PLXNA4Q9HCM2 1894 aa17.73■□□□□ 0.43
IFT20-216ENST00000588477 CSPG5O95196 566 aa17.72■□□□□ 0.43
IFT20-216ENST00000588477 LINC00271P0C7V0 271 aa17.72■□□□□ 0.43
IFT20-216ENST00000588477 GTF2F1P35269 517 aaKnown RBP eCLIP17.72■□□□□ 0.43
IFT20-216ENST00000588477 FAM26DQ5JW98 314 aa17.72■□□□□ 0.43
IFT20-216ENST00000588477 IFIT1BQ5T764 474 aaKnown RBP17.72■□□□□ 0.43
IFT20-216ENST00000588477 CYFIP1Q7L576 1253 aa17.72■□□□□ 0.43
IFT20-216ENST00000588477 RNF135Q8IUD6 432 aa17.72■□□□□ 0.43
IFT20-216ENST00000588477 MTMR8Q96EF0 704 aa17.72■□□□□ 0.43
IFT20-216ENST00000588477 C11orf84Q9BUA3 381 aaPredicted RBP17.72■□□□□ 0.43
IFT20-216ENST00000588477 RWDD3Q9Y3V2 267 aa17.72■□□□□ 0.43
IFT20-216ENST00000588477 KMT2EQ8IZD2 1858 aa17.71■□□□□ 0.43
IFT20-216ENST00000588477 GCOM1H8Y6P7 765 aaPredicted RBP17.71■□□□□ 0.43
IFT20-216ENST00000588477 POLR2MP0CAP2 368 aa17.71■□□□□ 0.43
IFT20-216ENST00000588477 ARHGAP4P98171 946 aa17.71■□□□□ 0.43
IFT20-216ENST00000588477 HERC4Q5GLZ8 1057 aaPredicted RBP17.71■□□□□ 0.43
IFT20-216ENST00000588477 CWC27Q6UX04 472 aaKnown RBP17.71■□□□□ 0.43
IFT20-216ENST00000588477 HOMER1Q86YM7 354 aa17.71■□□□□ 0.43
IFT20-216ENST00000588477 UBAC1Q9BSL1 405 aa17.71■□□□□ 0.43
IFT20-216ENST00000588477 KRT23Q9C075 422 aa17.71■□□□□ 0.43
IFT20-216ENST00000588477 MAD2L2Q9UI95 211 aa17.71■□□□□ 0.43
IFT20-216ENST00000588477 SUPT16HQ9Y5B9 1047 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms