RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 ATP6V0A1Q93050 837 aa18.38■□□□□ 0.53
ERCC1-206ENST00000588300 LY9Q9HBG7 655 aa18.38■□□□□ 0.53
ERCC1-206ENST00000588300 SEC63Q9UGP8 760 aaKnown RBP18.38■□□□□ 0.53
ERCC1-206ENST00000588300 LCHNA4D1U4 455 aa18.37■□□□□ 0.53
ERCC1-206ENST00000588300 RSPH10B2B2RC85 870 aa18.37■□□□□ 0.53
ERCC1-206ENST00000588300 SPATA31C2B4DYI2 1134 aa18.37■□□□□ 0.53
ERCC1-206ENST00000588300 FIBPO43427 364 aa18.37■□□□□ 0.53
ERCC1-206ENST00000588300 RSPH10BP0C881 870 aa18.37■□□□□ 0.53
ERCC1-206ENST00000588300 SMARCA1P28370 1054 aa18.37■□□□□ 0.53
ERCC1-206ENST00000588300 THPOP40225 353 aa18.37■□□□□ 0.53
ERCC1-206ENST00000588300 GRB10Q13322 594 aa18.37■□□□□ 0.53
ERCC1-206ENST00000588300 MBTPS1Q14703 1052 aa18.37■□□□□ 0.53
ERCC1-206ENST00000588300 KRT40Q6A162 431 aa18.37■□□□□ 0.53
ERCC1-206ENST00000588300 METTL7BQ6UX53 244 aa18.37■□□□□ 0.53
ERCC1-206ENST00000588300 RAD9AQ99638 391 aa18.37■□□□□ 0.53
ERCC1-206ENST00000588300 LZTS2Q9BRK4 669 aa18.37■□□□□ 0.53
ERCC1-206ENST00000588300 MYL10Q9BUA6 226 aa18.37■□□□□ 0.53
ERCC1-206ENST00000588300 USP26Q9BXU7 913 aa18.37■□□□□ 0.53
ERCC1-206ENST00000588300 BCAS3Q9H6U6 928 aa18.37■□□□□ 0.53
ERCC1-206ENST00000588300 RTEL1Q9NZ71 1219 aa18.37■□□□□ 0.53
ERCC1-206ENST00000588300 REV3LO60673 3130 aa18.37■□□□□ 0.53
ERCC1-206ENST00000588300 MICAL3Q7RTP6 2002 aa18.37■□□□□ 0.53
ERCC1-206ENST00000588300 PRC1O43663 620 aa18.36■□□□□ 0.53
ERCC1-206ENST00000588300 SMIM10L2AP0DMW4 78 aa18.36■□□□□ 0.53
ERCC1-206ENST00000588300 SMIM10L2BP0DMW5 78 aa18.36■□□□□ 0.53
ERCC1-206ENST00000588300 SIP14410 1827 aa18.36■□□□□ 0.53
ERCC1-206ENST00000588300 HOXC8P31273 242 aa18.36■□□□□ 0.53
ERCC1-206ENST00000588300 GNAQP50148 359 aa18.36■□□□□ 0.53
ERCC1-206ENST00000588300 MUC3AQ02505 3323 aa18.36■□□□□ 0.53
ERCC1-206ENST00000588300 TFF2Q03403 129 aa18.36■□□□□ 0.53
ERCC1-206ENST00000588300 PCNX4Q63HM2 1172 aa18.36■□□□□ 0.53
ERCC1-206ENST00000588300 XRRA1Q6P2D8 792 aa18.36■□□□□ 0.53
ERCC1-206ENST00000588300 NFXL1Q6ZNB6 911 aa18.36■□□□□ 0.53
ERCC1-206ENST00000588300 CYFIP1Q7L576 1253 aa18.36■□□□□ 0.53
ERCC1-206ENST00000588300 SPRED2Q7Z698 418 aa18.36■□□□□ 0.53
ERCC1-206ENST00000588300 COG5Q9UP83 839 aa18.36■□□□□ 0.53
ERCC1-206ENST00000588300 TCF20Q9UGU0 1960 aaKnown RBP18.35■□□□□ 0.53
ERCC1-206ENST00000588300 CCDC69A6NI79 296 aa18.35■□□□□ 0.53
ERCC1-206ENST00000588300 PIK3CDO00329 1044 aa18.35■□□□□ 0.53
ERCC1-206ENST00000588300 LPXNO60711 386 aa18.35■□□□□ 0.53
ERCC1-206ENST00000588300 MCM5P33992 734 aa18.35■□□□□ 0.53
ERCC1-206ENST00000588300 SEMA3FQ13275 785 aa18.35■□□□□ 0.53
ERCC1-206ENST00000588300 USP17L6PQ6QN14 398 aa18.35■□□□□ 0.53
ERCC1-206ENST00000588300 TMTC2Q8N394 836 aa18.35■□□□□ 0.53
ERCC1-206ENST00000588300 DBF4BQ8NFT6 615 aa18.35■□□□□ 0.53
ERCC1-206ENST00000588300 TMEM87BQ96K49 555 aa18.35■□□□□ 0.53
ERCC1-206ENST00000588300 GPR20Q99678 358 aa18.35■□□□□ 0.53
ERCC1-206ENST00000588300 RNPEPQ9H4A4 650 aa18.35■□□□□ 0.53
ERCC1-206ENST00000588300 ZNF215Q9UL58 517 aaPredicted RBP18.35■□□□□ 0.53
ERCC1-206ENST00000588300 SH2B2O14492 632 aaPredicted RBP18.34■□□□□ 0.53
ERCC1-206ENST00000588300 MEIS2O14770 477 aa18.34■□□□□ 0.53
ERCC1-206ENST00000588300 TREHO43280 583 aa18.34■□□□□ 0.53
ERCC1-206ENST00000588300 CAND2O75155 1236 aa18.34■□□□□ 0.53
ERCC1-206ENST00000588300 AMHP03971 560 aa18.34■□□□□ 0.53
ERCC1-206ENST00000588300 GNAT1P11488 350 aa18.34■□□□□ 0.53
ERCC1-206ENST00000588300 BMP1P13497 986 aa18.34■□□□□ 0.53
ERCC1-206ENST00000588300 FAM117BQ6P1L5 589 aa18.34■□□□□ 0.53
ERCC1-206ENST00000588300 NLRX1Q86UT6 975 aa18.34■□□□□ 0.53
ERCC1-206ENST00000588300 GDPD5Q8WTR4 605 aa18.34■□□□□ 0.53
ERCC1-206ENST00000588300 TGS1Q96RS0 853 aaKnown RBP18.34■□□□□ 0.53
ERCC1-206ENST00000588300 SENP7Q9BQF6 1050 aa18.34■□□□□ 0.53
ERCC1-206ENST00000588300 LMCD1Q9NZU5 365 aa18.34■□□□□ 0.53
ERCC1-206ENST00000588300 NCOR1O75376 2440 aa18.33■□□□□ 0.53
ERCC1-206ENST00000588300 LINC01553A4QN01 128 aa18.33■□□□□ 0.52
ERCC1-206ENST00000588300 PLEKHA8P1O95397 391 aa18.33■□□□□ 0.52
ERCC1-206ENST00000588300 CALM1P0DP23 149 aa18.33■□□□□ 0.52
ERCC1-206ENST00000588300 CALM2P0DP24 149 aa18.33■□□□□ 0.52
ERCC1-206ENST00000588300 CALM3P0DP25 149 aa18.33■□□□□ 0.52
ERCC1-206ENST00000588300 KCNQ1P51787 676 aa18.33■□□□□ 0.52
ERCC1-206ENST00000588300 ERVK-21P61565 698 aa18.33■□□□□ 0.52
ERCC1-206ENST00000588300 PLEKHG4Q58EX7 1191 aa18.33■□□□□ 0.52
ERCC1-206ENST00000588300 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.33■□□□□ 0.52
ERCC1-206ENST00000588300 TRIM50Q86XT4 487 aa18.33■□□□□ 0.52
ERCC1-206ENST00000588300 GIMAP8Q8ND71 665 aaPredicted RBP18.33■□□□□ 0.52
ERCC1-206ENST00000588300 LSG1Q9H089 658 aaKnown RBP18.33■□□□□ 0.52
ERCC1-206ENST00000588300 MTUS1Q9ULD2 1270 aa18.33■□□□□ 0.52
ERCC1-206ENST00000588300 INSL6Q9Y581 213 aa18.33■□□□□ 0.52
ERCC1-206ENST00000588300 SLC27A2O14975 620 aa18.32■□□□□ 0.52
ERCC1-206ENST00000588300 CTSHP09668 335 aa18.32■□□□□ 0.52
ERCC1-206ENST00000588300 LIFRP42702 1097 aa18.32■□□□□ 0.52
ERCC1-206ENST00000588300 SP4Q02446 784 aa18.32■□□□□ 0.52
ERCC1-206ENST00000588300 MKRN4PQ13434 485 aaPredicted RBP18.32■□□□□ 0.52
ERCC1-206ENST00000588300 UTP14CQ5TAP6 766 aaKnown RBP18.32■□□□□ 0.52
ERCC1-206ENST00000588300 MYOCDQ8IZQ8 938 aa18.32■□□□□ 0.52
ERCC1-206ENST00000588300 SRBD1Q8N5C6 995 aaKnown RBP18.32■□□□□ 0.52
ERCC1-206ENST00000588300 SEPT8Q92599 483 aa18.32■□□□□ 0.52
ERCC1-206ENST00000588300 HLA-CQ95604 372 aa18.32■□□□□ 0.52
ERCC1-206ENST00000588300 SETD4Q9NVD3 440 aa18.32■□□□□ 0.52
ERCC1-206ENST00000588300 KAT6AQ92794 2004 aa18.32■□□□□ 0.52
ERCC1-206ENST00000588300 XIRP2A4UGR9 3374 aa18.31■□□□□ 0.52
ERCC1-206ENST00000588300 BDP1A6H8Y1 2624 aa18.31■□□□□ 0.52
ERCC1-206ENST00000588300 RXRAP19793 462 aa18.31■□□□□ 0.52
ERCC1-206ENST00000588300 CMTR1Q8N1G2 835 aaKnown RBP18.31■□□□□ 0.52
ERCC1-206ENST00000588300 GPRASP2Q96D09 838 aa18.31■□□□□ 0.52
ERCC1-206ENST00000588300 CDHR1Q96JP9 859 aa18.31■□□□□ 0.52
ERCC1-206ENST00000588300 NECAB3Q96P71 396 aaPredicted RBP18.31■□□□□ 0.52
ERCC1-206ENST00000588300 ESYT1Q9BSJ8 1104 aa18.31■□□□□ 0.52
ERCC1-206ENST00000588300 PSTPIP2Q9H939 334 aa18.31■□□□□ 0.52
ERCC1-206ENST00000588300 SUGCTQ9HAC7 445 aa18.31■□□□□ 0.52
ERCC1-206ENST00000588300 SLC12A7Q9Y666 1083 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms