RNA–Protein interactions for RNA: ENST00000588254.1

SSC5D-203, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

TSL 2

Gene SSC5D, Length 3,085 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-203ENST00000588254 TRPM3Q9HCF6 1732 aaPredicted RBP18.45■□□□□ 0.54
SSC5D-203ENST00000588254 TNNC1P63316 161 aa18.45■□□□□ 0.54
SSC5D-203ENST00000588254 GRB10Q13322 594 aa18.45■□□□□ 0.54
SSC5D-203ENST00000588254 SNCBQ16143 134 aa18.45■□□□□ 0.54
SSC5D-203ENST00000588254 TCERG1LQ5VWI1 586 aa18.45■□□□□ 0.54
SSC5D-203ENST00000588254 CENPPQ6IPU0 288 aa18.45■□□□□ 0.54
SSC5D-203ENST00000588254 DZIP1Q86YF9 867 aaKnown RBP18.45■□□□□ 0.54
SSC5D-203ENST00000588254 CLEC10AQ8IUN9 316 aa18.45■□□□□ 0.54
SSC5D-203ENST00000588254 SEC16BQ96JE7 1060 aa18.45■□□□□ 0.54
SSC5D-203ENST00000588254 GPR101Q96P66 508 aaPredicted RBP18.45■□□□□ 0.54
SSC5D-203ENST00000588254 PIGSQ96S52 555 aa18.45■□□□□ 0.54
SSC5D-203ENST00000588254 MTA3Q9BTC8 594 aa18.45■□□□□ 0.54
SSC5D-203ENST00000588254 TAF1DQ9H5J8 278 aaPredicted RBP18.45■□□□□ 0.54
SSC5D-203ENST00000588254 BLOC1S4Q9NUP1 217 aa18.45■□□□□ 0.54
SSC5D-203ENST00000588254 TPX2Q9ULW0 747 aaKnown RBP18.45■□□□□ 0.54
SSC5D-203ENST00000588254 CEP83Q9Y592 693 aa18.45■□□□□ 0.54
SSC5D-203ENST00000588254 SART1O43290 800 aaKnown RBP18.45■□□□□ 0.54
SSC5D-203ENST00000588254 PAX7P23759 505 aa18.45■□□□□ 0.54
SSC5D-203ENST00000588254 ELF1P32519 619 aa18.45■□□□□ 0.54
SSC5D-203ENST00000588254 NAA25Q14CX7 972 aa18.45■□□□□ 0.54
SSC5D-203ENST00000588254 NKX1-1Q15270 411 aaPredicted RBP18.45■□□□□ 0.54
SSC5D-203ENST00000588254 PPP1R7Q15435 360 aa18.45■□□□□ 0.54
SSC5D-203ENST00000588254 HIBCHQ6NVY1 386 aaPredicted RBP18.45■□□□□ 0.54
SSC5D-203ENST00000588254 TXNRD3Q86VQ6 643 aa18.45■□□□□ 0.54
SSC5D-203ENST00000588254 PARP9Q8IXQ6 854 aa18.45■□□□□ 0.54
SSC5D-203ENST00000588254 USP38Q8NB14 1042 aa18.45■□□□□ 0.54
SSC5D-203ENST00000588254 RAPGEF5Q92565 580 aa18.45■□□□□ 0.54
SSC5D-203ENST00000588254 INPP4AQ96PE3 977 aaPredicted RBP18.45■□□□□ 0.54
SSC5D-203ENST00000588254 KRIT1O00522 736 aa18.44■□□□□ 0.54
SSC5D-203ENST00000588254 BUB1BO60566 1050 aaPredicted RBP18.44■□□□□ 0.54
SSC5D-203ENST00000588254 CLTAP09496 248 aa18.44■□□□□ 0.54
SSC5D-203ENST00000588254 PRLRP16471 622 aa18.44■□□□□ 0.54
SSC5D-203ENST00000588254 SLCO1A2P46721 670 aa18.44■□□□□ 0.54
SSC5D-203ENST00000588254 DHX9Q08211 1270 aaKnown RBP18.44■□□□□ 0.54
SSC5D-203ENST00000588254 NEDD9Q14511 834 aa18.44■□□□□ 0.54
SSC5D-203ENST00000588254 CDC37Q16543 378 aaPredicted RBP18.44■□□□□ 0.54
SSC5D-203ENST00000588254 FAM133BQ5BKY9 247 aaKnown RBP18.44■□□□□ 0.54
SSC5D-203ENST00000588254 SOGA3Q5TF21 947 aa18.44■□□□□ 0.54
SSC5D-203ENST00000588254 TEX2Q8IWB9 1127 aa18.44■□□□□ 0.54
SSC5D-203ENST00000588254 TGFBRAP1Q8WUH2 860 aa18.44■□□□□ 0.54
SSC5D-203ENST00000588254 NLRP3Q96P20 1036 aa18.44■□□□□ 0.54
SSC5D-203ENST00000588254 TMBIM4Q9HC24 238 aa18.44■□□□□ 0.54
SSC5D-203ENST00000588254 HMGB1P1B2RPK0 211 aaPredicted RBP18.44■□□□□ 0.54
SSC5D-203ENST00000588254 CLNS1AP54105 237 aaKnown RBP18.44■□□□□ 0.54
SSC5D-203ENST00000588254 DCAF17Q5H9S7 520 aaPredicted RBP18.44■□□□□ 0.54
SSC5D-203ENST00000588254 NEK8Q86SG6 692 aa18.44■□□□□ 0.54
SSC5D-203ENST00000588254 FAM228AQ86W67 206 aa18.44■□□□□ 0.54
SSC5D-203ENST00000588254 C7orf25Q9BPX7 421 aa18.44■□□□□ 0.54
SSC5D-203ENST00000588254 PNMA2Q9UL42 364 aa18.44■□□□□ 0.54
SSC5D-203ENST00000588254 NOL4O94818 638 aa18.43■□□□□ 0.54
SSC5D-203ENST00000588254 CDK17Q00537 523 aa18.43■□□□□ 0.54
SSC5D-203ENST00000588254 CALCRLQ16602 461 aa18.43■□□□□ 0.54
SSC5D-203ENST00000588254 CACNA2D3Q8IZS8 1091 aa18.43■□□□□ 0.54
SSC5D-203ENST00000588254 FUKQ8N0W3 1084 aa18.43■□□□□ 0.54
SSC5D-203ENST00000588254 ZNF444Q8N0Y2 327 aaPredicted RBP18.43■□□□□ 0.54
SSC5D-203ENST00000588254 SPAG5Q96R06 1193 aa18.43■□□□□ 0.54
SSC5D-203ENST00000588254 BARHL2Q9NY43 387 aa18.43■□□□□ 0.54
SSC5D-203ENST00000588254 BCS1LQ9Y276 419 aa18.43■□□□□ 0.54
SSC5D-203ENST00000588254 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.43■□□□□ 0.54
SSC5D-203ENST00000588254 DUOX1Q9NRD9 1551 aa18.43■□□□□ 0.54
SSC5D-203ENST00000588254 NEBLO76041 1014 aa18.43■□□□□ 0.54
SSC5D-203ENST00000588254 PPP2R5AQ15172 486 aa18.43■□□□□ 0.54
SSC5D-203ENST00000588254 ASTE1Q2TB18 679 aaPredicted RBP18.43■□□□□ 0.54
SSC5D-203ENST00000588254 ACCSLQ4AC99 568 aa18.43■□□□□ 0.54
SSC5D-203ENST00000588254 ERFEQ4G0M1 354 aa18.43■□□□□ 0.54
SSC5D-203ENST00000588254 GJB7Q6PEY0 223 aa18.43■□□□□ 0.54
SSC5D-203ENST00000588254 LRRC55Q6ZSA7 311 aa18.43■□□□□ 0.54
SSC5D-203ENST00000588254 CD2APQ9Y5K6 639 aa18.43■□□□□ 0.54
SSC5D-203ENST00000588254 PTK2Q05397 1052 aa18.43■□□□□ 0.54
SSC5D-203ENST00000588254 ECM1Q16610 540 aa18.43■□□□□ 0.54
SSC5D-203ENST00000588254 UBE2SQ16763 222 aa18.43■□□□□ 0.54
SSC5D-203ENST00000588254 FIGNQ5HY92 759 aa18.43■□□□□ 0.54
SSC5D-203ENST00000588254 TSG101Q99816 390 aa18.43■□□□□ 0.54
SSC5D-203ENST00000588254 TMEM47Q9BQJ4 181 aa18.43■□□□□ 0.54
SSC5D-203ENST00000588254 CTNND1O60716 968 aaKnown RBP18.42■□□□□ 0.54
SSC5D-203ENST00000588254 SLC9A1P19634 815 aa18.42■□□□□ 0.54
SSC5D-203ENST00000588254 ABCB4P21439 1286 aa18.42■□□□□ 0.54
SSC5D-203ENST00000588254 SMTNP53814 917 aa18.42■□□□□ 0.54
SSC5D-203ENST00000588254 ITIH3Q06033 890 aa18.42■□□□□ 0.54
SSC5D-203ENST00000588254 MEI1Q5TIA1 1274 aa18.42■□□□□ 0.54
SSC5D-203ENST00000588254 TAX1BP1Q86VP1 789 aa18.42■□□□□ 0.54
SSC5D-203ENST00000588254 PNMA5Q96PV4 448 aa18.42■□□□□ 0.54
SSC5D-203ENST00000588254 NOC2LQ9Y3T9 749 aaKnown RBP18.42■□□□□ 0.54
SSC5D-203ENST00000588254 NR2E1Q9Y466 385 aa18.42■□□□□ 0.54
SSC5D-203ENST00000588254 TAF1P21675 1872 aa18.42■□□□□ 0.54
SSC5D-203ENST00000588254 RASSF9O75901 435 aa18.42■□□□□ 0.54
SSC5D-203ENST00000588254 HNRNPH3P31942 346 aaKnown RBP18.42■□□□□ 0.54
SSC5D-203ENST00000588254 GBP2P32456 591 aaPredicted RBP18.42■□□□□ 0.54
SSC5D-203ENST00000588254 SCTRP47872 440 aa18.42■□□□□ 0.54
SSC5D-203ENST00000588254 NAB2Q15742 525 aa18.42■□□□□ 0.54
SSC5D-203ENST00000588254 UBAP2Q5T6F2 1119 aaKnown RBP18.42■□□□□ 0.54
SSC5D-203ENST00000588254 SH3RF3Q8TEJ3 882 aaPredicted RBP18.42■□□□□ 0.54
SSC5D-203ENST00000588254 WHAMMQ8TF30 809 aa18.42■□□□□ 0.54
SSC5D-203ENST00000588254 THOC1Q96FV9 657 aaKnown RBP18.42■□□□□ 0.54
SSC5D-203ENST00000588254 CARD10Q9BWT7 1032 aa18.42■□□□□ 0.54
SSC5D-203ENST00000588254 MLXIPLQ9NP71 852 aa18.42■□□□□ 0.54
SSC5D-203ENST00000588254 SEPT11Q9NVA2 429 aaKnown RBP18.42■□□□□ 0.54
SSC5D-203ENST00000588254 BTG4Q9NY30 223 aa18.42■□□□□ 0.54
SSC5D-203ENST00000588254 L3MBTL1Q9Y468 752 aa18.42■□□□□ 0.54
SSC5D-203ENST00000588254 ATP6V0A2Q9Y487 856 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms