RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 SYN2Q92777 582 aaPredicted RBP18.62■□□□□ 0.57
PRKCSH-205ENST00000587327 ZFP91Q96JP5 570 aaPredicted RBP18.62■□□□□ 0.57
PRKCSH-205ENST00000587327 NUCKS1Q9H1E3 243 aaKnown RBP18.62■□□□□ 0.57
PRKCSH-205ENST00000587327 GOLGA6AQ9NYA3 693 aa18.62■□□□□ 0.57
PRKCSH-205ENST00000587327 TNNI2P48788 182 aa18.62■□□□□ 0.57
PRKCSH-205ENST00000587327 COASYQ13057 564 aa18.62■□□□□ 0.57
PRKCSH-205ENST00000587327 HAUS3Q68CZ6 603 aa18.62■□□□□ 0.57
PRKCSH-205ENST00000587327 SMARCAL1Q9NZC9 954 aa18.62■□□□□ 0.57
PRKCSH-205ENST00000587327 CEP72Q9P209 647 aa18.62■□□□□ 0.57
PRKCSH-205ENST00000587327 PLIN4Q96Q06 1357 aa18.62■□□□□ 0.57
PRKCSH-205ENST00000587327 F8W031 263 aaPredicted RBP18.61■□□□□ 0.57
PRKCSH-205ENST00000587327 TRAF5O00463 557 aa18.61■□□□□ 0.57
PRKCSH-205ENST00000587327 NOL4O94818 638 aa18.61■□□□□ 0.57
PRKCSH-205ENST00000587327 EPHB4P54760 987 aa18.61■□□□□ 0.57
PRKCSH-205ENST00000587327 MRPS25P82663 173 aaKnown RBP18.61■□□□□ 0.57
PRKCSH-205ENST00000587327 SLC9C1Q4G0N8 1177 aa18.61■□□□□ 0.57
PRKCSH-205ENST00000587327 EMBQ6PCB8 327 aa18.61■□□□□ 0.57
PRKCSH-205ENST00000587327 HAS1Q92839 578 aa18.61■□□□□ 0.57
PRKCSH-205ENST00000587327 MXD3Q9BW11 206 aa18.61■□□□□ 0.57
PRKCSH-205ENST00000587327 EHD2Q9NZN4 543 aa18.61■□□□□ 0.57
PRKCSH-205ENST00000587327 DDX25Q9UHL0 483 aaKnown RBP18.61■□□□□ 0.57
PRKCSH-205ENST00000587327 TSKSQ9UJT2 592 aa18.61■□□□□ 0.57
PRKCSH-205ENST00000587327 SUGT1Q9Y2Z0 365 aa18.61■□□□□ 0.57
PRKCSH-205ENST00000587327 PNMA6FA0A0J9YX94 578 aa18.61■□□□□ 0.57
PRKCSH-205ENST00000587327 PLSCR1O15162 318 aa18.61■□□□□ 0.57
PRKCSH-205ENST00000587327 TNFRSF8P28908 595 aa18.61■□□□□ 0.57
PRKCSH-205ENST00000587327 PICALMQ13492 652 aa18.61■□□□□ 0.57
PRKCSH-205ENST00000587327 TDRD12Q587J7 1177 aaKnown RBP18.61■□□□□ 0.57
PRKCSH-205ENST00000587327 FAM83BQ5T0W9 1011 aa18.61■□□□□ 0.57
PRKCSH-205ENST00000587327 PPP1R18Q6NYC8 613 aa18.61■□□□□ 0.57
PRKCSH-205ENST00000587327 LRRC47Q8N1G4 583 aaKnown RBP18.61■□□□□ 0.57
PRKCSH-205ENST00000587327 SH3GL2Q99962 352 aa18.61■□□□□ 0.57
PRKCSH-205ENST00000587327 NLRC4Q9NPP4 1024 aa18.61■□□□□ 0.57
PRKCSH-205ENST00000587327 PANK4Q9NVE7 773 aa18.61■□□□□ 0.57
PRKCSH-205ENST00000587327 BUB1O43683 1085 aa18.6■□□□□ 0.57
PRKCSH-205ENST00000587327 TLR2O60603 784 aa18.6■□□□□ 0.57
PRKCSH-205ENST00000587327 SERPING1P05155 500 aa18.6■□□□□ 0.57
PRKCSH-205ENST00000587327 HMGB2P26583 209 aaKnown RBP18.6■□□□□ 0.57
PRKCSH-205ENST00000587327 CLK2P49760 499 aaKnown RBP18.6■□□□□ 0.57
PRKCSH-205ENST00000587327 CFAP221Q4G0U5 840 aa18.6■□□□□ 0.57
PRKCSH-205ENST00000587327 CCDC40Q4G0X9 1142 aa18.6■□□□□ 0.57
PRKCSH-205ENST00000587327 GLE1Q53GS7 698 aaKnown RBP18.6■□□□□ 0.57
PRKCSH-205ENST00000587327 SFMBT2Q5VUG0 894 aa18.6■□□□□ 0.57
PRKCSH-205ENST00000587327 ZC3H12CQ9C0D7 883 aaKnown RBP18.6■□□□□ 0.57
PRKCSH-205ENST00000587327 JMJD4Q9H9V9 463 aa18.6■□□□□ 0.57
PRKCSH-205ENST00000587327 GPCPD1Q9NPB8 672 aa18.6■□□□□ 0.57
PRKCSH-205ENST00000587327 DDX4Q9NQI0 724 aaKnown RBP18.6■□□□□ 0.57
PRKCSH-205ENST00000587327 RBM12Q9NTZ6 932 aaKnown RBP18.6■□□□□ 0.57
PRKCSH-205ENST00000587327 RNF14Q9UBS8 474 aa18.6■□□□□ 0.57
PRKCSH-205ENST00000587327 MMP10P09238 476 aa18.59■□□□□ 0.57
PRKCSH-205ENST00000587327 NAP1L1P55209 391 aaKnown RBP18.59■□□□□ 0.57
PRKCSH-205ENST00000587327 GABPAQ06546 454 aa18.59■□□□□ 0.57
PRKCSH-205ENST00000587327 UBE2SQ16763 222 aa18.59■□□□□ 0.57
PRKCSH-205ENST00000587327 DOK7Q18PE1 504 aa18.59■□□□□ 0.57
PRKCSH-205ENST00000587327 FAM26FQ5R3K3 315 aa18.59■□□□□ 0.57
PRKCSH-205ENST00000587327 C8orf74Q6P047 294 aa18.59■□□□□ 0.57
PRKCSH-205ENST00000587327 DPP8Q6V1X1 898 aaPredicted RBP18.59■□□□□ 0.57
PRKCSH-205ENST00000587327 CAVIN3Q969G5 261 aa18.59■□□□□ 0.57
PRKCSH-205ENST00000587327 CEP63Q96MT8 703 aa18.59■□□□□ 0.57
PRKCSH-205ENST00000587327 BMP2KQ9NSY1 1161 aaPredicted RBP18.59■□□□□ 0.57
PRKCSH-205ENST00000587327 PCDHA12Q9UN75 941 aa18.59■□□□□ 0.57
PRKCSH-205ENST00000587327 IGKV6D-41A0A0C4DH26 115 aa18.59■□□□□ 0.57
PRKCSH-205ENST00000587327 ALS2CLQ60I27 953 aa18.59■□□□□ 0.57
PRKCSH-205ENST00000587327 ADGRF4Q8IZF3 695 aa18.59■□□□□ 0.57
PRKCSH-205ENST00000587327 TRIM34Q9BYJ4 488 aa18.59■□□□□ 0.57
PRKCSH-205ENST00000587327 PLEKHA4Q9H4M7 779 aa18.59■□□□□ 0.57
PRKCSH-205ENST00000587327 GOLGA8KD6RF30 607 aa18.58■□□□□ 0.57
PRKCSH-205ENST00000587327 PPP1R11O60927 126 aaPredicted RBP18.58■□□□□ 0.57
PRKCSH-205ENST00000587327 GNA14O95837 355 aa18.58■□□□□ 0.57
PRKCSH-205ENST00000587327 APBA3O96018 575 aa18.58■□□□□ 0.57
PRKCSH-205ENST00000587327 AKR1B1P15121 316 aa18.58■□□□□ 0.57
PRKCSH-205ENST00000587327 EIF6P56537 245 aaKnown RBP18.58■□□□□ 0.57
PRKCSH-205ENST00000587327 ZNF543Q08ER8 600 aa18.58■□□□□ 0.57
PRKCSH-205ENST00000587327 PPFIA1Q13136 1202 aa18.58■□□□□ 0.57
PRKCSH-205ENST00000587327 HYIQ5T013 277 aa18.58■□□□□ 0.57
PRKCSH-205ENST00000587327 GJA10Q969M2 543 aa18.58■□□□□ 0.57
PRKCSH-205ENST00000587327 MS4A14Q96JA4 679 aa18.58■□□□□ 0.57
PRKCSH-205ENST00000587327 NT5C3AQ9H0P0 336 aa18.58■□□□□ 0.57
PRKCSH-205ENST00000587327 LUC7LQ9NQ29 371 aaKnown RBP18.58■□□□□ 0.57
PRKCSH-205ENST00000587327 OPA1O60313 960 aa18.58■□□□□ 0.56
PRKCSH-205ENST00000587327 ALDH1B1P30837 517 aa18.58■□□□□ 0.56
PRKCSH-205ENST00000587327 PDE6BP35913 854 aa18.58■□□□□ 0.56
PRKCSH-205ENST00000587327 IRAK1P51617 712 aa18.58■□□□□ 0.56
PRKCSH-205ENST00000587327 MRPL12P52815 198 aaKnown RBP18.58■□□□□ 0.56
PRKCSH-205ENST00000587327 MARSP56192 900 aaKnown RBP18.58■□□□□ 0.56
PRKCSH-205ENST00000587327 POLR2FP61218 127 aaKnown RBP18.58■□□□□ 0.56
PRKCSH-205ENST00000587327 NAB2Q15742 525 aa18.58■□□□□ 0.56
PRKCSH-205ENST00000587327 TRIM59Q8IWR1 403 aa18.58■□□□□ 0.56
PRKCSH-205ENST00000587327 CUL5Q93034 780 aa18.58■□□□□ 0.56
PRKCSH-205ENST00000587327 PCDHA2Q9Y5H9 948 aa18.58■□□□□ 0.56
PRKCSH-205ENST00000587327 MARCH6O60337 910 aa18.57■□□□□ 0.56
PRKCSH-205ENST00000587327 TTLL1O95922 423 aa18.57■□□□□ 0.56
PRKCSH-205ENST00000587327 EPB41P11171 864 aaKnown RBP18.57■□□□□ 0.56
PRKCSH-205ENST00000587327 GCFC2P16383 781 aaKnown RBP18.57■□□□□ 0.56
PRKCSH-205ENST00000587327 DNAJC21Q5F1R6 531 aaKnown RBP18.57■□□□□ 0.56
PRKCSH-205ENST00000587327 TSEN2Q8NCE0 465 aaKnown RBP18.57■□□□□ 0.56
PRKCSH-205ENST00000587327 BBXQ8WY36 941 aaPredicted RBP18.57■□□□□ 0.56
PRKCSH-205ENST00000587327 MASTLQ96GX5 879 aa18.57■□□□□ 0.56
PRKCSH-205ENST00000587327 LSM14BQ9BX40 385 aaKnown RBP18.57■□□□□ 0.56
PRKCSH-205ENST00000587327 FGFBP2Q9BYJ0 223 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms