RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 PPFIA4O75335 1185 aa16.91■□□□□ 0.3
ATG4D-207ENST00000587256 FXR1P51114 621 aaKnown RBP eCLIP16.91■□□□□ 0.3
ATG4D-207ENST00000587256 KIAA0753Q2KHM9 967 aa16.91■□□□□ 0.3
ATG4D-207ENST00000587256 CEP55Q53EZ4 464 aa16.91■□□□□ 0.3
ATG4D-207ENST00000587256 MFSD5Q6N075 450 aa16.91■□□□□ 0.3
ATG4D-207ENST00000587256 TMEM199Q8N511 208 aa16.91■□□□□ 0.3
ATG4D-207ENST00000587256 RASGRP4Q8TDF6 673 aa16.91■□□□□ 0.3
ATG4D-207ENST00000587256 MXRA8Q9BRK3 442 aa16.91■□□□□ 0.3
ATG4D-207ENST00000587256 STK36Q9NRP7 1315 aa16.91■□□□□ 0.3
ATG4D-207ENST00000587256 DOCK5Q9H7D0 1870 aa16.9■□□□□ 0.3
ATG4D-207ENST00000587256 LARGE1O95461 756 aa16.9■□□□□ 0.3
ATG4D-207ENST00000587256 LGALS2P05162 132 aa16.9■□□□□ 0.3
ATG4D-207ENST00000587256 CYP2C9P11712 490 aa16.9■□□□□ 0.3
ATG4D-207ENST00000587256 KCNA2P16389 499 aa16.9■□□□□ 0.3
ATG4D-207ENST00000587256 CYP2C18P33260 490 aa16.9■□□□□ 0.3
ATG4D-207ENST00000587256 GTF3C6Q969F1 213 aa16.9■□□□□ 0.3
ATG4D-207ENST00000587256 AIFM3Q96NN9 605 aa16.9■□□□□ 0.3
ATG4D-207ENST00000587256 GPR20Q99678 358 aa16.9■□□□□ 0.3
ATG4D-207ENST00000587256 NOC4LQ9BVI4 516 aaKnown RBP16.9■□□□□ 0.3
ATG4D-207ENST00000587256 C22orf23Q9BZE7 217 aa16.9■□□□□ 0.3
ATG4D-207ENST00000587256 UPF2Q9HAU5 1272 aaKnown RBP16.9■□□□□ 0.3
ATG4D-207ENST00000587256 KCNH7Q9NS40 1196 aa16.9■□□□□ 0.3
ATG4D-207ENST00000587256 ADAMTS3O15072 1205 aa16.89■□□□□ 0.29
ATG4D-207ENST00000587256 MAFGO15525 162 aa16.89■□□□□ 0.29
ATG4D-207ENST00000587256 ATP9AO75110 1047 aa16.89■□□□□ 0.29
ATG4D-207ENST00000587256 PPIGQ13427 754 aaKnown RBP eCLIP16.89■□□□□ 0.294e-6■■□□□ 13.5
ATG4D-207ENST00000587256 PTGISQ16647 500 aa16.89■□□□□ 0.29
ATG4D-207ENST00000587256 ME3Q16798 604 aa16.89■□□□□ 0.29
ATG4D-207ENST00000587256 UTP14CQ5TAP6 766 aaKnown RBP16.89■□□□□ 0.29
ATG4D-207ENST00000587256 SESTD1Q86VW0 696 aa16.89■□□□□ 0.29
ATG4D-207ENST00000587256 NECAB1Q8N987 351 aa16.89■□□□□ 0.29
ATG4D-207ENST00000587256 CYP2W1Q8TAV3 490 aa16.89■□□□□ 0.29
ATG4D-207ENST00000587256 SDF4Q9BRK5 362 aa16.89■□□□□ 0.29
ATG4D-207ENST00000587256 JPH1Q9HDC5 661 aaPredicted RBP16.89■□□□□ 0.29
ATG4D-207ENST00000587256 ZNF215Q9UL58 517 aaPredicted RBP16.89■□□□□ 0.29
ATG4D-207ENST00000587256 UMODL1Q5DID0 1318 aa16.89■□□□□ 0.29
ATG4D-207ENST00000587256 H3BRB1 525 aa16.88■□□□□ 0.29
ATG4D-207ENST00000587256 HAS3O00219 553 aa16.88■□□□□ 0.29
ATG4D-207ENST00000587256 CSF2RAP15509 400 aa16.88■□□□□ 0.29
ATG4D-207ENST00000587256 XBP1P17861 261 aa16.88■□□□□ 0.29
ATG4D-207ENST00000587256 CCL23P55773 120 aa16.88■□□□□ 0.29
ATG4D-207ENST00000587256 C9orf50Q5SZB4 431 aa16.88■□□□□ 0.29
ATG4D-207ENST00000587256 TRIM50Q86XT4 487 aa16.88■□□□□ 0.29
ATG4D-207ENST00000587256 FAM177A1Q8N128 213 aaPredicted RBP16.88■□□□□ 0.29
ATG4D-207ENST00000587256 CCDC155Q8N6L0 562 aa16.88■□□□□ 0.29
ATG4D-207ENST00000587256 C16orf70Q9BSU1 422 aa16.88■□□□□ 0.29
ATG4D-207ENST00000587256 TUT1Q9H6E5 874 aaKnown RBP16.88■□□□□ 0.29
ATG4D-207ENST00000587256 HDAC6Q9UBN7 1215 aa16.88■□□□□ 0.29
ATG4D-207ENST00000587256 GTF2IRD1Q9UHL9 959 aa16.88■□□□□ 0.29
ATG4D-207ENST00000587256 PCDHA4Q9UN74 947 aa16.88■□□□□ 0.29
ATG4D-207ENST00000587256 DTNBO60941 627 aa16.87■□□□□ 0.29
ATG4D-207ENST00000587256 ARP10275 920 aa16.87■□□□□ 0.29
ATG4D-207ENST00000587256 TCF7P36402 384 aaPredicted RBP16.87■□□□□ 0.29
ATG4D-207ENST00000587256 EPHB4P54760 987 aa16.87■□□□□ 0.29
ATG4D-207ENST00000587256 SETQ01105 290 aaPredicted RBP16.87■□□□□ 0.29
ATG4D-207ENST00000587256 SHHQ15465 462 aa16.87■□□□□ 0.29
ATG4D-207ENST00000587256 GDF6Q6KF10 455 aaPredicted RBP16.87■□□□□ 0.29
ATG4D-207ENST00000587256 NIPA1Q7RTP0 329 aa16.87■□□□□ 0.29
ATG4D-207ENST00000587256 PLA2G4DQ86XP0 818 aa16.87■□□□□ 0.29
ATG4D-207ENST00000587256 WASF1Q92558 559 aa16.87■□□□□ 0.29
ATG4D-207ENST00000587256 RNPC3Q96LT9 517 aaKnown RBP16.87■□□□□ 0.29
ATG4D-207ENST00000587256 WNT8AQ9H1J5 351 aa16.87■□□□□ 0.29
ATG4D-207ENST00000587256 ORC3Q9UBD5 711 aaPredicted RBP16.87■□□□□ 0.29
ATG4D-207ENST00000587256 SLC9A2Q9UBY0 812 aa16.87■□□□□ 0.29
ATG4D-207ENST00000587256 TELO2Q9Y4R8 837 aa16.87■□□□□ 0.29
ATG4D-207ENST00000587256 FAM86B1E9PN63 330 aa16.86■□□□□ 0.29
ATG4D-207ENST00000587256 MEIS1O00470 390 aa16.86■□□□□ 0.29
ATG4D-207ENST00000587256 SOX1O00570 391 aaPredicted RBP16.86■□□□□ 0.29
ATG4D-207ENST00000587256 CTDNEP1O95476 244 aa16.86■□□□□ 0.29
ATG4D-207ENST00000587256 CYP3A4P08684 503 aa16.86■□□□□ 0.29
ATG4D-207ENST00000587256 FAM86B2P0C5J1 330 aa16.86■□□□□ 0.29
ATG4D-207ENST00000587256 BFSP2Q13515 415 aa16.86■□□□□ 0.29
ATG4D-207ENST00000587256 LRIT3Q3SXY7 679 aa16.86■□□□□ 0.29
ATG4D-207ENST00000587256 GALNT17Q6IS24 598 aa16.86■□□□□ 0.29
ATG4D-207ENST00000587256 PSRC1Q6PGN9 363 aaPredicted RBP16.86■□□□□ 0.29
ATG4D-207ENST00000587256 BLIDQ8IZY5 108 aa16.86■□□□□ 0.29
ATG4D-207ENST00000587256 DAGLBQ8NCG7 672 aa16.86■□□□□ 0.29
ATG4D-207ENST00000587256 CRYGNQ8WXF5 182 aa16.86■□□□□ 0.29
ATG4D-207ENST00000587256 AGO4Q9HCK5 861 aaKnown RBP16.86■□□□□ 0.29
ATG4D-207ENST00000587256 KCNJ14Q9UNX9 436 aa16.86■□□□□ 0.29
ATG4D-207ENST00000587256 NFASCO94856 1347 aa16.86■□□□□ 0.29
ATG4D-207ENST00000587256 TANC1Q9C0D5 1861 aa16.85■□□□□ 0.29
ATG4D-207ENST00000587256 C17orf102A2RUQ5 167 aa16.85■□□□□ 0.29
ATG4D-207ENST00000587256 DDX39AO00148 427 aaKnown RBP16.85■□□□□ 0.29
ATG4D-207ENST00000587256 PITPNM1O00562 1244 aa16.85■□□□□ 0.29
ATG4D-207ENST00000587256 SMIM10L2AP0DMW4 78 aa16.85■□□□□ 0.29
ATG4D-207ENST00000587256 SMIM10L2BP0DMW5 78 aa16.85■□□□□ 0.29
ATG4D-207ENST00000587256 ACRP10323 421 aa16.85■□□□□ 0.29
ATG4D-207ENST00000587256 RBM25P49756 843 aaKnown RBP16.85■□□□□ 0.29
ATG4D-207ENST00000587256 ITGB3BPQ13352 177 aaPredicted RBP16.85■□□□□ 0.29
ATG4D-207ENST00000587256 RETREG2Q8NC44 543 aa16.85■□□□□ 0.29
ATG4D-207ENST00000587256 SEPT1Q8WYJ6 367 aa16.85■□□□□ 0.29
ATG4D-207ENST00000587256 GLG1Q92896 1179 aa16.85■□□□□ 0.29
ATG4D-207ENST00000587256 SCLYQ96I15 445 aa16.85■□□□□ 0.29
ATG4D-207ENST00000587256 TCEAL9Q9UHQ7 104 aa16.85■□□□□ 0.29
ATG4D-207ENST00000587256 LIMCH1Q9UPQ0 1083 aa16.85■□□□□ 0.29
ATG4D-207ENST00000587256 IGLV3-22A0A075B6J6 115 aa16.84■□□□□ 0.29
ATG4D-207ENST00000587256 PRR16Q569H4 304 aa16.84■□□□□ 0.29
ATG4D-207ENST00000587256 NSUN7Q8NE18 718 aaKnown RBP16.84■□□□□ 0.29
ATG4D-207ENST00000587256 CAGE1Q8TC20 777 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms