RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 NID2Q14112 1375 aa20.26■□□□□ 0.83
TPM4-206ENST00000587201 ZBBXA8MT70 800 aa20.26■□□□□ 0.83
TPM4-206ENST00000587201 GRXCR1A8MXD5 290 aa20.26■□□□□ 0.83
TPM4-206ENST00000587201 H3BRB1 525 aa20.26■□□□□ 0.83
TPM4-206ENST00000587201 DNAJB2P25686 324 aa20.26■□□□□ 0.83
TPM4-206ENST00000587201 MTMR1Q13613 665 aa20.26■□□□□ 0.83
TPM4-206ENST00000587201 PFKFB3Q16875 520 aaPredicted RBP20.26■□□□□ 0.83
TPM4-206ENST00000587201 TEX2Q8IWB9 1127 aa20.26■□□□□ 0.83
TPM4-206ENST00000587201 AFAP1L1Q8TED9 768 aa20.26■□□□□ 0.83
TPM4-206ENST00000587201 VWCEQ96DN2 955 aa20.26■□□□□ 0.83
TPM4-206ENST00000587201 PGBD1Q96JS3 809 aa20.26■□□□□ 0.83
TPM4-206ENST00000587201 GUCD1Q96NT3 240 aa20.26■□□□□ 0.83
TPM4-206ENST00000587201 GLT8D2Q9H1C3 349 aa20.26■□□□□ 0.83
TPM4-206ENST00000587201 TUT1Q9H6E5 874 aaKnown RBP20.26■□□□□ 0.83
TPM4-206ENST00000587201 CYP46A1Q9Y6A2 500 aa20.26■□□□□ 0.83
TPM4-206ENST00000587201 TMEM265A0A087WTH1 108 aa20.25■□□□□ 0.83
TPM4-206ENST00000587201 ATP9AO75110 1047 aa20.25■□□□□ 0.83
TPM4-206ENST00000587201 FOSP01100 380 aaPredicted RBP20.25■□□□□ 0.83
TPM4-206ENST00000587201 SCG2P13521 617 aa20.25■□□□□ 0.83
TPM4-206ENST00000587201 ZNF200P98182 395 aaPredicted RBP20.25■□□□□ 0.83
TPM4-206ENST00000587201 AKAP17AQ02040 695 aaKnown RBP20.25■□□□□ 0.83
TPM4-206ENST00000587201 UTP14CQ5TAP6 766 aaKnown RBP20.25■□□□□ 0.83
TPM4-206ENST00000587201 DHX38Q92620 1227 aaKnown RBP20.25■□□□□ 0.83
TPM4-206ENST00000587201 ANO3Q9BYT9 981 aa20.25■□□□□ 0.83
TPM4-206ENST00000587201 FTOQ9C0B1 505 aaKnown RBP eCLIP20.25■□□□□ 0.83
TPM4-206ENST00000587201 TTYH1Q9H313 450 aaPredicted RBP20.25■□□□□ 0.83
TPM4-206ENST00000587201 JADE2Q9NQC1 790 aa20.25■□□□□ 0.83
TPM4-206ENST00000587201 PKD2L1Q9P0L9 805 aa20.25■□□□□ 0.83
TPM4-206ENST00000587201 C17orf102A2RUQ5 167 aa20.24■□□□□ 0.83
TPM4-206ENST00000587201 MAFGO15525 162 aa20.24■□□□□ 0.83
TPM4-206ENST00000587201 PRPF3O43395 683 aaKnown RBP20.24■□□□□ 0.83
TPM4-206ENST00000587201 ACTN1P12814 892 aa20.24■□□□□ 0.83
TPM4-206ENST00000587201 SELPP16109 830 aa20.24■□□□□ 0.83
TPM4-206ENST00000587201 KCNA2P16389 499 aa20.24■□□□□ 0.83
TPM4-206ENST00000587201 PDIA3P30101 505 aaKnown RBP20.24■□□□□ 0.83
TPM4-206ENST00000587201 CCT2P78371 535 aaKnown RBP20.24■□□□□ 0.83
TPM4-206ENST00000587201 PTK7Q13308 1070 aa20.24■□□□□ 0.83
TPM4-206ENST00000587201 AP3B2Q13367 1082 aa20.24■□□□□ 0.83
TPM4-206ENST00000587201 PHKBQ93100 1093 aa20.24■□□□□ 0.83
TPM4-206ENST00000587201 TIFAQ96CG3 184 aa20.24■□□□□ 0.83
TPM4-206ENST00000587201 PBX4Q9BYU1 374 aa20.24■□□□□ 0.83
TPM4-206ENST00000587201 TM6SF1Q9BZW5 370 aa20.24■□□□□ 0.83
TPM4-206ENST00000587201 TMEM260Q9NX78 707 aa20.24■□□□□ 0.83
TPM4-206ENST00000587201 TELO2Q9Y4R8 837 aa20.24■□□□□ 0.83
TPM4-206ENST00000587201 SLC4A7Q9Y6M7 1214 aa20.24■□□□□ 0.83
TPM4-206ENST00000587201 LAMA2P24043 3122 aaKnown RBP20.24■□□□□ 0.83
TPM4-206ENST00000587201 PBX2P40425 430 aa20.23■□□□□ 0.83
TPM4-206ENST00000587201 CLK2P49760 499 aaKnown RBP20.23■□□□□ 0.83
TPM4-206ENST00000587201 TOB2Q14106 344 aaPredicted RBP20.23■□□□□ 0.83
TPM4-206ENST00000587201 LRRC8DQ7L1W4 858 aa20.23■□□□□ 0.83
TPM4-206ENST00000587201 CCDC12Q8WUD4 166 aaPredicted RBP20.23■□□□□ 0.83
TPM4-206ENST00000587201 CDX2Q99626 313 aaPredicted RBP20.23■□□□□ 0.83
TPM4-206ENST00000587201 MXRA8Q9BRK3 442 aa20.23■□□□□ 0.83
TPM4-206ENST00000587201 UPF3BQ9BZI7 483 aaKnown RBP20.23■□□□□ 0.83
TPM4-206ENST00000587201 ZNF215Q9UL58 517 aaPredicted RBP20.23■□□□□ 0.83
TPM4-206ENST00000587201 DOCK5Q9H7D0 1870 aa20.22■□□□□ 0.83
TPM4-206ENST00000587201 PPFIA3O75145 1194 aa20.22■□□□□ 0.83
TPM4-206ENST00000587201 SMIM10L2AP0DMW4 78 aa20.22■□□□□ 0.83
TPM4-206ENST00000587201 SMIM10L2BP0DMW5 78 aa20.22■□□□□ 0.83
TPM4-206ENST00000587201 CKBP12277 381 aa20.22■□□□□ 0.83
TPM4-206ENST00000587201 TCF7P36402 384 aaPredicted RBP20.22■□□□□ 0.83
TPM4-206ENST00000587201 EVCP57679 992 aa20.22■□□□□ 0.83
TPM4-206ENST00000587201 RBL2Q08999 1139 aa20.22■□□□□ 0.83
TPM4-206ENST00000587201 HIC1Q14526 733 aa20.22■□□□□ 0.83
TPM4-206ENST00000587201 RAB30Q15771 203 aa20.22■□□□□ 0.83
TPM4-206ENST00000587201 NTRK3Q16288 839 aa20.22■□□□□ 0.83
TPM4-206ENST00000587201 PKN1Q16512 942 aa20.22■□□□□ 0.83
TPM4-206ENST00000587201 JAKMIP3Q5VZ66 844 aa20.22■□□□□ 0.83
TPM4-206ENST00000587201 TRIM50Q86XT4 487 aa20.22■□□□□ 0.83
TPM4-206ENST00000587201 SLC26A6Q9BXS9 759 aa20.22■□□□□ 0.83
TPM4-206ENST00000587201 RNF26Q9BY78 433 aaPredicted RBP20.22■□□□□ 0.83
TPM4-206ENST00000587201 NCOA5Q9HCD5 579 aaKnown RBP20.22■□□□□ 0.83
TPM4-206ENST00000587201 C6orf50Q9HD87 102 aa20.22■□□□□ 0.83
TPM4-206ENST00000587201 MSRAQ9UJ68 235 aa20.22■□□□□ 0.83
TPM4-206ENST00000587201 SCN5AQ14524 2016 aa20.22■□□□□ 0.83
TPM4-206ENST00000587201 IFNAR1P17181 557 aa20.21■□□□□ 0.83
TPM4-206ENST00000587201 SEPT1Q8WYJ6 367 aa20.21■□□□□ 0.83
TPM4-206ENST00000587201 ATP6V0A1Q93050 837 aa20.21■□□□□ 0.83
TPM4-206ENST00000587201 LARP6Q9BRS8 491 aaKnown RBP20.21■□□□□ 0.83
TPM4-206ENST00000587201 ZMYND12Q9H0C1 365 aa20.21■□□□□ 0.83
TPM4-206ENST00000587201 RNPEPQ9H4A4 650 aa20.21■□□□□ 0.83
TPM4-206ENST00000587201 ZNF576Q9H609 170 aa20.21■□□□□ 0.83
TPM4-206ENST00000587201 KCNH7Q9NS40 1196 aa20.21■□□□□ 0.83
TPM4-206ENST00000587201 PDRG1Q9NUG6 133 aa20.21■□□□□ 0.83
TPM4-206ENST00000587201 TANC1Q9C0D5 1861 aa20.21■□□□□ 0.83
TPM4-206ENST00000587201 ESYT2A0FGR8 921 aa20.2■□□□□ 0.82
TPM4-206ENST00000587201 PARNO95453 639 aaKnown RBP20.2■□□□□ 0.82
TPM4-206ENST00000587201 GNAT1P11488 350 aa20.2■□□□□ 0.82
TPM4-206ENST00000587201 GNA11P29992 359 aa20.2■□□□□ 0.82
TPM4-206ENST00000587201 ZNF76P36508 570 aa20.2■□□□□ 0.82
TPM4-206ENST00000587201 SREBF1P36956 1147 aa20.2■□□□□ 0.82
TPM4-206ENST00000587201 TRIM71Q2Q1W2 868 aaKnown RBP20.2■□□□□ 0.82
TPM4-206ENST00000587201 CEP55Q53EZ4 464 aa20.2■□□□□ 0.82
TPM4-206ENST00000587201 ZNF618Q5T7W0 954 aa20.2■□□□□ 0.82
TPM4-206ENST00000587201 CYP2W1Q8TAV3 490 aa20.2■□□□□ 0.82
TPM4-206ENST00000587201 MYLIPQ8WY64 445 aa20.2■□□□□ 0.82
TPM4-206ENST00000587201 WNT8BQ93098 351 aa20.2■□□□□ 0.82
TPM4-206ENST00000587201 TRIP12Q14669 1992 aaPredicted RBP20.2■□□□□ 0.82
TPM4-206ENST00000587201 GSTTP1A0A1W2PQM5 241 aa20.19■□□□□ 0.82
TPM4-206ENST00000587201 TREHO43280 583 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms