RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 ANO3Q9BYT9 981 aa23.16■■□□□ 1.3
VAT1-203ENST00000587062 TUT1Q9H6E5 874 aaKnown RBP23.16■■□□□ 1.3
VAT1-203ENST00000587062 GTF2IRD1Q9UHL9 959 aa23.16■■□□□ 1.3
VAT1-203ENST00000587062 UBIAD1Q9Y5Z9 338 aa23.16■■□□□ 1.3
VAT1-203ENST00000587062 CDKL5O76039 1030 aa23.15■■□□□ 1.3
VAT1-203ENST00000587062 PARNO95453 639 aaKnown RBP23.15■■□□□ 1.3
VAT1-203ENST00000587062 GNAT1P11488 350 aa23.15■■□□□ 1.3
VAT1-203ENST00000587062 PHKBQ93100 1093 aa23.15■■□□□ 1.3
VAT1-203ENST00000587062 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.15■■□□□ 1.3
VAT1-203ENST00000587062 MXRA8Q9BRK3 442 aa23.15■■□□□ 1.3
VAT1-203ENST00000587062 ZMYND12Q9H0C1 365 aa23.15■■□□□ 1.3
VAT1-203ENST00000587062 HDAC6Q9UBN7 1215 aa23.15■■□□□ 1.3
VAT1-203ENST00000587062 HAS3O00219 553 aa23.14■■□□□ 1.29
VAT1-203ENST00000587062 ACTN1P12814 892 aa23.14■■□□□ 1.29
VAT1-203ENST00000587062 EPHB4P54760 987 aa23.14■■□□□ 1.29
VAT1-203ENST00000587062 TMEM240Q5SV17 173 aa23.14■■□□□ 1.29
VAT1-203ENST00000587062 FAM109BQ6ICB4 259 aaPredicted RBP23.14■■□□□ 1.29
VAT1-203ENST00000587062 TYW1BQ6NUM6 668 aa23.14■■□□□ 1.29
VAT1-203ENST00000587062 ZNF365Q70YC5 407 aa23.14■■□□□ 1.29
VAT1-203ENST00000587062 REXO1Q8N1G1 1221 aaKnown RBP23.14■■□□□ 1.29
VAT1-203ENST00000587062 DEFB123Q8N688 67 aa23.14■■□□□ 1.29
VAT1-203ENST00000587062 AFAP1L1Q8TED9 768 aa23.14■■□□□ 1.29
VAT1-203ENST00000587062 TNPO1Q92973 898 aaKnown RBP23.14■■□□□ 1.29
VAT1-203ENST00000587062 SDF4Q9BRK5 362 aa23.14■■□□□ 1.29
VAT1-203ENST00000587062 SH3GLB2Q9NR46 395 aa23.14■■□□□ 1.29
VAT1-203ENST00000587062 LGALS2P05162 132 aa23.13■■□□□ 1.29
VAT1-203ENST00000587062 ACRP10323 421 aa23.13■■□□□ 1.29
VAT1-203ENST00000587062 ITGB5P18084 799 aa23.13■■□□□ 1.29
VAT1-203ENST00000587062 SEMA3FQ13275 785 aa23.13■■□□□ 1.29
VAT1-203ENST00000587062 NTRK3Q16288 839 aa23.13■■□□□ 1.29
VAT1-203ENST00000587062 ZNF697Q5TEC3 545 aa23.13■■□□□ 1.29
VAT1-203ENST00000587062 GDF6Q6KF10 455 aaPredicted RBP23.13■■□□□ 1.29
VAT1-203ENST00000587062 SEPT1Q8WYJ6 367 aa23.13■■□□□ 1.29
VAT1-203ENST00000587062 GPR20Q99678 358 aa23.13■■□□□ 1.29
VAT1-203ENST00000587062 C16orf70Q9BSU1 422 aa23.13■■□□□ 1.29
VAT1-203ENST00000587062 SLKQ9H2G2 1235 aaPredicted RBP23.13■■□□□ 1.29
VAT1-203ENST00000587062 C17orf102A2RUQ5 167 aa23.12■■□□□ 1.29
VAT1-203ENST00000587062 DEXIO95424 95 aa23.12■■□□□ 1.29
VAT1-203ENST00000587062 SREBF1P36956 1147 aa23.12■■□□□ 1.29
VAT1-203ENST00000587062 CLK2P49760 499 aaKnown RBP23.12■■□□□ 1.29
VAT1-203ENST00000587062 SP4Q02446 784 aa23.12■■□□□ 1.29
VAT1-203ENST00000587062 PTK7Q13308 1070 aa23.12■■□□□ 1.29
VAT1-203ENST00000587062 PKN1Q16512 942 aa23.12■■□□□ 1.29
VAT1-203ENST00000587062 CEP55Q53EZ4 464 aa23.12■■□□□ 1.29
VAT1-203ENST00000587062 JAKMIP3Q5VZ66 844 aa23.12■■□□□ 1.29
VAT1-203ENST00000587062 FAM177A1Q8N128 213 aaPredicted RBP23.12■■□□□ 1.29
VAT1-203ENST00000587062 C22orf23Q9BZE7 217 aa23.12■■□□□ 1.29
VAT1-203ENST00000587062 NCOA5Q9HCD5 579 aaKnown RBP23.12■■□□□ 1.29
VAT1-203ENST00000587062 UMODL1Q5DID0 1318 aa23.11■■□□□ 1.29
VAT1-203ENST00000587062 XBP1P17861 261 aa23.11■■□□□ 1.29
VAT1-203ENST00000587062 NLRP5P59047 1200 aa23.11■■□□□ 1.29
VAT1-203ENST00000587062 STK3Q13188 491 aa23.11■■□□□ 1.29
VAT1-203ENST00000587062 UTP14CQ5TAP6 766 aaKnown RBP23.11■■□□□ 1.29
VAT1-203ENST00000587062 NIPA1Q7RTP0 329 aa23.11■■□□□ 1.29
VAT1-203ENST00000587062 PPP1R13LQ8WUF5 828 aa23.11■■□□□ 1.29
VAT1-203ENST00000587062 HERVK_113Q902F9 699 aa23.11■■□□□ 1.29
VAT1-203ENST00000587062 SCLYQ96I15 445 aa23.11■■□□□ 1.29
VAT1-203ENST00000587062 WNT8AQ9H1J5 351 aa23.11■■□□□ 1.29
VAT1-203ENST00000587062 KCNH7Q9NS40 1196 aa23.11■■□□□ 1.29
VAT1-203ENST00000587062 TCEAL9Q9UHQ7 104 aa23.11■■□□□ 1.29
VAT1-203ENST00000587062 IQCF3P0C7M6 154 aa23.1■■□□□ 1.29
VAT1-203ENST00000587062 KCNA2P16389 499 aa23.1■■□□□ 1.29
VAT1-203ENST00000587062 TCF7P36402 384 aaPredicted RBP23.1■■□□□ 1.29
VAT1-203ENST00000587062 ARHGAP4P98171 946 aa23.1■■□□□ 1.29
VAT1-203ENST00000587062 C16orf59Q7L2K0 433 aa23.1■■□□□ 1.29
VAT1-203ENST00000587062 PGBD1Q96JS3 809 aa23.1■■□□□ 1.29
VAT1-203ENST00000587062 FTOQ9C0B1 505 aaKnown RBP eCLIP23.1■■□□□ 1.29
VAT1-203ENST00000587062 JPH1Q9HDC5 661 aaPredicted RBP23.1■■□□□ 1.29
VAT1-203ENST00000587062 TMEM260Q9NX78 707 aa23.1■■□□□ 1.29
VAT1-203ENST00000587062 ATP9AO75110 1047 aa23.09■■□□□ 1.29
VAT1-203ENST00000587062 SELPP16109 830 aa23.09■■□□□ 1.29
VAT1-203ENST00000587062 GLG1Q92896 1179 aa23.09■■□□□ 1.29
VAT1-203ENST00000587062 ATP6V0A1Q93050 837 aa23.09■■□□□ 1.29
VAT1-203ENST00000587062 SMARCAD1Q9H4L7 1026 aa23.09■■□□□ 1.29
VAT1-203ENST00000587062 AZI2Q9H6S1 392 aa23.09■■□□□ 1.29
VAT1-203ENST00000587062 PKD2L1Q9P0L9 805 aa23.09■■□□□ 1.29
VAT1-203ENST00000587062 SLC9A2Q9UBY0 812 aa23.09■■□□□ 1.29
VAT1-203ENST00000587062 NFASCO94856 1347 aa23.08■■□□□ 1.29
VAT1-203ENST00000587062 TMEM265A0A087WTH1 108 aa23.08■■□□□ 1.29
VAT1-203ENST00000587062 ZBBXA8MT70 800 aa23.08■■□□□ 1.29
VAT1-203ENST00000587062 CYP3A4P08684 503 aa23.08■■□□□ 1.29
VAT1-203ENST00000587062 GALNT17Q6IS24 598 aa23.08■■□□□ 1.29
VAT1-203ENST00000587062 OTOP2Q7RTS6 562 aa23.08■■□□□ 1.29
VAT1-203ENST00000587062 DEFB128Q7Z7B8 93 aa23.08■■□□□ 1.29
VAT1-203ENST00000587062 LARP6Q9BRS8 491 aaKnown RBP23.08■■□□□ 1.29
VAT1-203ENST00000587062 BCAS3Q9H6U6 928 aa23.08■■□□□ 1.29
VAT1-203ENST00000587062 ERAP1Q9NZ08 941 aa23.08■■□□□ 1.29
VAT1-203ENST00000587062 VPS54Q9P1Q0 977 aa23.08■■□□□ 1.29
VAT1-203ENST00000587062 SLC4A7Q9Y6M7 1214 aa23.08■■□□□ 1.29
VAT1-203ENST00000587062 MEIS1O00470 390 aa23.07■■□□□ 1.28
VAT1-203ENST00000587062 SMIM10L2AP0DMW4 78 aa23.07■■□□□ 1.28
VAT1-203ENST00000587062 SMIM10L2BP0DMW5 78 aa23.07■■□□□ 1.28
VAT1-203ENST00000587062 SETQ01105 290 aaPredicted RBP23.07■■□□□ 1.28
VAT1-203ENST00000587062 RBL2Q08999 1139 aa23.07■■□□□ 1.28
VAT1-203ENST00000587062 LRRC8DQ7L1W4 858 aa23.07■■□□□ 1.28
VAT1-203ENST00000587062 PLA2G4DQ86XP0 818 aa23.07■■□□□ 1.28
VAT1-203ENST00000587062 WASF1Q92558 559 aa23.07■■□□□ 1.28
VAT1-203ENST00000587062 MSRAQ9UJ68 235 aa23.07■■□□□ 1.28
VAT1-203ENST00000587062 NRCAMQ92823 1304 aa23.07■■□□□ 1.28
VAT1-203ENST00000587062 RANBP2P49792 3224 aaKnown RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms