RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 NUCB2P80303 420 aa16.5■□□□□ 0.23
SCAMP4-209ENST00000585335 ARHGAP1Q07960 439 aa16.5■□□□□ 0.23
SCAMP4-209ENST00000585335 ZNF174Q15697 407 aa16.5■□□□□ 0.23
SCAMP4-209ENST00000585335 FSCN1Q16658 493 aaKnown RBP16.5■□□□□ 0.23
SCAMP4-209ENST00000585335 GNASQ5JWF2 1037 aa16.5■□□□□ 0.23
SCAMP4-209ENST00000585335 GJC2Q5T442 439 aaPredicted RBP16.5■□□□□ 0.23
SCAMP4-209ENST00000585335 LRCH2Q5VUJ6 765 aa16.5■□□□□ 0.23
SCAMP4-209ENST00000585335 ANKLE1Q8NAG6 615 aa16.5■□□□□ 0.23
SCAMP4-209ENST00000585335 PCSK9Q8NBP7 692 aaKnown RBP16.5■□□□□ 0.23
SCAMP4-209ENST00000585335 PPTC7Q8NI37 304 aa16.5■□□□□ 0.23
SCAMP4-209ENST00000585335 COPS5Q92905 334 aa16.5■□□□□ 0.23
SCAMP4-209ENST00000585335 RIT2Q99578 217 aa16.5■□□□□ 0.23
SCAMP4-209ENST00000585335 TEKT3Q9BXF9 490 aa16.5■□□□□ 0.23
SCAMP4-209ENST00000585335 CRISPLD2Q9H0B8 497 aa16.5■□□□□ 0.23
SCAMP4-209ENST00000585335 SLC9A2Q9UBY0 812 aa16.5■□□□□ 0.23
SCAMP4-209ENST00000585335 ATP6V1DQ9Y5K8 247 aa16.5■□□□□ 0.23
SCAMP4-209ENST00000585335 CCDC85CA6NKD9 419 aa16.49■□□□□ 0.23
SCAMP4-209ENST00000585335 MSH4O15457 936 aa16.49■□□□□ 0.23
SCAMP4-209ENST00000585335 EDIL3O43854 480 aa16.49■□□□□ 0.23
SCAMP4-209ENST00000585335 KPNA6O60684 536 aa16.49■□□□□ 0.23
SCAMP4-209ENST00000585335 ATP9AO75110 1047 aa16.49■□□□□ 0.23
SCAMP4-209ENST00000585335 FARP2O94887 1054 aaPredicted RBP16.49■□□□□ 0.23
SCAMP4-209ENST00000585335 F13A1P00488 732 aa16.49■□□□□ 0.23
SCAMP4-209ENST00000585335 CST5P28325 142 aaPredicted RBP16.49■□□□□ 0.23
SCAMP4-209ENST00000585335 KRT76Q01546 638 aa16.49■□□□□ 0.23
SCAMP4-209ENST00000585335 SP2Q02086 613 aa16.49■□□□□ 0.23
SCAMP4-209ENST00000585335 FOXD4L5Q5VV16 416 aaPredicted RBP16.49■□□□□ 0.23
SCAMP4-209ENST00000585335 POTEDQ86YR6 584 aa16.49■□□□□ 0.23
SCAMP4-209ENST00000585335 FOXD4L4Q8WXT5 416 aaPredicted RBP16.49■□□□□ 0.23
SCAMP4-209ENST00000585335 SLC5A5Q92911 643 aa16.49■□□□□ 0.23
SCAMP4-209ENST00000585335 ZNF396Q96N95 335 aaPredicted RBP16.49■□□□□ 0.23
SCAMP4-209ENST00000585335 FRMPD3Q5JV73 1810 aa16.48■□□□□ 0.23
SCAMP4-209ENST00000585335 DNM1LO00429 736 aa16.48■□□□□ 0.23
SCAMP4-209ENST00000585335 LAD1O00515 517 aa16.48■□□□□ 0.23
SCAMP4-209ENST00000585335 SORBS3O60504 671 aa16.48■□□□□ 0.23
SCAMP4-209ENST00000585335 ADAMTS4O75173 837 aa16.48■□□□□ 0.23
SCAMP4-209ENST00000585335 BRD1O95696 1058 aa16.48■□□□□ 0.23
SCAMP4-209ENST00000585335 OR52Z1P0C646 297 aa16.48■□□□□ 0.23
SCAMP4-209ENST00000585335 NKX3-2P78367 333 aa16.48■□□□□ 0.23
SCAMP4-209ENST00000585335 SP4Q02446 784 aa16.48■□□□□ 0.23
SCAMP4-209ENST00000585335 ITGB3BPQ13352 177 aaPredicted RBP16.48■□□□□ 0.23
SCAMP4-209ENST00000585335 LRRC41Q15345 812 aa16.48■□□□□ 0.23
SCAMP4-209ENST00000585335 DGKDQ16760 1214 aa16.48■□□□□ 0.23
SCAMP4-209ENST00000585335 TMEM63BQ5T3F8 832 aa16.48■□□□□ 0.23
SCAMP4-209ENST00000585335 ETNPPLQ8TBG4 499 aa16.48■□□□□ 0.23
SCAMP4-209ENST00000585335 AFG1LQ8WV93 481 aa16.48■□□□□ 0.23
SCAMP4-209ENST00000585335 IPO9Q96P70 1041 aaKnown RBP16.48■□□□□ 0.23
SCAMP4-209ENST00000585335 TSEN34Q9BSV6 310 aaKnown RBP16.48■□□□□ 0.23
SCAMP4-209ENST00000585335 KCNMB3Q9NPA1 279 aa16.48■□□□□ 0.23
SCAMP4-209ENST00000585335 POLR3EQ9NVU0 708 aa16.48■□□□□ 0.23
SCAMP4-209ENST00000585335 CIZ1Q9ULV3 898 aaPredicted RBP16.48■□□□□ 0.23
SCAMP4-209ENST00000585335 MOXD2PA6NHM9 499 aa16.47■□□□□ 0.23
SCAMP4-209ENST00000585335 A6NJR5 290 aa16.47■□□□□ 0.23
SCAMP4-209ENST00000585335 DDX39AO00148 427 aaKnown RBP16.47■□□□□ 0.23
SCAMP4-209ENST00000585335 TOB1P50616 345 aaPredicted RBP16.47■□□□□ 0.23
SCAMP4-209ENST00000585335 TMEM266Q2M3C6 531 aa16.47■□□□□ 0.23
SCAMP4-209ENST00000585335 ZNF746Q6NUN9 644 aaPredicted RBP16.47■□□□□ 0.23
SCAMP4-209ENST00000585335 SMAP1Q8IYB5 467 aaPredicted RBP16.47■□□□□ 0.23
SCAMP4-209ENST00000585335 SEPT1Q8WYJ6 367 aa16.47■□□□□ 0.23
SCAMP4-209ENST00000585335 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.47■□□□□ 0.23
SCAMP4-209ENST00000585335 SAMM50Q9Y512 469 aa16.47■□□□□ 0.23
SCAMP4-209ENST00000585335 PCDHB6Q9Y5E3 794 aa16.47■□□□□ 0.23
SCAMP4-209ENST00000585335 ELP1O95163 1332 aa16.46■□□□□ 0.23
SCAMP4-209ENST00000585335 WDR64B1ANS9 1081 aa16.46■□□□□ 0.23
SCAMP4-209ENST00000585335 PPFIA4O75335 1185 aa16.46■□□□□ 0.23
SCAMP4-209ENST00000585335 CABYRO75952 493 aa16.46■□□□□ 0.23
SCAMP4-209ENST00000585335 MMP3P08254 477 aa16.46■□□□□ 0.23
SCAMP4-209ENST00000585335 MYL3P08590 195 aa16.46■□□□□ 0.23
SCAMP4-209ENST00000585335 SFNP31947 248 aa16.46■□□□□ 0.23
SCAMP4-209ENST00000585335 JAK3P52333 1124 aa16.46■□□□□ 0.23
SCAMP4-209ENST00000585335 BEX3Q00994 111 aa16.46■□□□□ 0.23
SCAMP4-209ENST00000585335 PKP1Q13835 747 aa16.46■□□□□ 0.23
SCAMP4-209ENST00000585335 NBR1Q14596 966 aa16.46■□□□□ 0.23
SCAMP4-209ENST00000585335 ATL3Q6DD88 541 aa16.46■□□□□ 0.23
SCAMP4-209ENST00000585335 MIS18BP1Q6P0N0 1132 aa16.46■□□□□ 0.23
SCAMP4-209ENST00000585335 KLHDC9Q8NEP7 349 aa16.46■□□□□ 0.23
SCAMP4-209ENST00000585335 UIMC1Q96RL1 719 aa16.46■□□□□ 0.23
SCAMP4-209ENST00000585335 GPR20Q99678 358 aa16.46■□□□□ 0.23
SCAMP4-209ENST00000585335 RAB34Q9BZG1 259 aa16.46■□□□□ 0.23
SCAMP4-209ENST00000585335 PCDHA12Q9UN75 941 aa16.46■□□□□ 0.23
SCAMP4-209ENST00000585335 WNT7AO00755 349 aa16.45■□□□□ 0.22
SCAMP4-209ENST00000585335 DHX15O43143 795 aaKnown RBP16.45■□□□□ 0.22
SCAMP4-209ENST00000585335 PSMD10O75832 226 aa16.45■□□□□ 0.22
SCAMP4-209ENST00000585335 PTGS1P23219 599 aa16.45■□□□□ 0.22
SCAMP4-209ENST00000585335 PRPHP41219 470 aa16.45■□□□□ 0.22
SCAMP4-209ENST00000585335 TXKP42681 527 aa16.45■□□□□ 0.22
SCAMP4-209ENST00000585335 ACTR2P61160 394 aa16.45■□□□□ 0.22
SCAMP4-209ENST00000585335 PTGDRQ13258 359 aa16.45■□□□□ 0.22
SCAMP4-209ENST00000585335 KCNA10Q16322 511 aa16.45■□□□□ 0.22
SCAMP4-209ENST00000585335 HSDL1Q3SXM5 330 aa16.45■□□□□ 0.22
SCAMP4-209ENST00000585335 RDM1Q8NG50 284 aa16.45■□□□□ 0.22
SCAMP4-209ENST00000585335 KATNAL1Q9BW62 490 aa16.45■□□□□ 0.22
SCAMP4-209ENST00000585335 AZI2Q9H6S1 392 aa16.45■□□□□ 0.22
SCAMP4-209ENST00000585335 ZNF215Q9UL58 517 aaPredicted RBP16.45■□□□□ 0.22
SCAMP4-209ENST00000585335 POTEFA5A3E0 1075 aa16.44■□□□□ 0.22
SCAMP4-209ENST00000585335 MYADML2A6NDP7 307 aa16.44■□□□□ 0.22
SCAMP4-209ENST00000585335 CHMP2AO43633 222 aa16.44■□□□□ 0.22
SCAMP4-209ENST00000585335 ASGR1P07306 291 aa16.44■□□□□ 0.22
SCAMP4-209ENST00000585335 PSAPP07602 524 aa16.44■□□□□ 0.22
SCAMP4-209ENST00000585335 DDIT3P35638 169 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms