RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 H3BRB1 525 aa14.16□□□□□ -0.14
SS18-225ENST00000585121 STXBP3O00186 592 aa14.16□□□□□ -0.14
SS18-225ENST00000585121 PARNO95453 639 aaKnown RBP14.16□□□□□ -0.14
SS18-225ENST00000585121 LGALS2P05162 132 aa14.16□□□□□ -0.14
SS18-225ENST00000585121 IQCF3P0C7M6 154 aa14.16□□□□□ -0.14
SS18-225ENST00000585121 SCG2P13521 617 aa14.16□□□□□ -0.14
SS18-225ENST00000585121 SP4Q02446 784 aa14.16□□□□□ -0.14
SS18-225ENST00000585121 SEMA3FQ13275 785 aa14.16□□□□□ -0.14
SS18-225ENST00000585121 PTK7Q13308 1070 aa14.16□□□□□ -0.14
SS18-225ENST00000585121 AP3B2Q13367 1082 aa14.16□□□□□ -0.14
SS18-225ENST00000585121 MTMR1Q13613 665 aa14.16□□□□□ -0.14
SS18-225ENST00000585121 PFKFB3Q16875 520 aaPredicted RBP14.16□□□□□ -0.14
SS18-225ENST00000585121 RASIP1Q5U651 963 aa14.16□□□□□ -0.14
SS18-225ENST00000585121 AGXT2Q9BYV1 514 aa14.16□□□□□ -0.14
SS18-225ENST00000585121 TUT1Q9H6E5 874 aaKnown RBP14.16□□□□□ -0.14
SS18-225ENST00000585121 ZSWIM6Q9HCJ5 1215 aa14.16□□□□□ -0.14
SS18-225ENST00000585121 MSRAQ9UJ68 235 aa14.16□□□□□ -0.14
SS18-225ENST00000585121 UBIAD1Q9Y5Z9 338 aa14.16□□□□□ -0.14
SS18-225ENST00000585121 SLC4A7Q9Y6M7 1214 aa14.16□□□□□ -0.14
SS18-225ENST00000585121 C17orf102A2RUQ5 167 aa14.15□□□□□ -0.14
SS18-225ENST00000585121 PRPF3O43395 683 aaKnown RBP14.15□□□□□ -0.14
SS18-225ENST00000585121 GNAT1P11488 350 aa14.15□□□□□ -0.14
SS18-225ENST00000585121 SELPP16109 830 aa14.15□□□□□ -0.14
SS18-225ENST00000585121 DNAJB2P25686 324 aa14.15□□□□□ -0.14
SS18-225ENST00000585121 RAB30Q15771 203 aa14.15□□□□□ -0.14
SS18-225ENST00000585121 UTP14CQ5TAP6 766 aaKnown RBP14.15□□□□□ -0.14
SS18-225ENST00000585121 MCTP2Q6DN12 878 aa14.15□□□□□ -0.14
SS18-225ENST00000585121 TIFAQ96CG3 184 aa14.15□□□□□ -0.14
SS18-225ENST00000585121 GPR20Q99678 358 aa14.15□□□□□ -0.14
SS18-225ENST00000585121 C16orf70Q9BSU1 422 aa14.15□□□□□ -0.14
SS18-225ENST00000585121 TM6SF1Q9BZW5 370 aa14.15□□□□□ -0.14
SS18-225ENST00000585121 C6orf50Q9HD87 102 aa14.15□□□□□ -0.14
SS18-225ENST00000585121 JADE2Q9NQC1 790 aa14.15□□□□□ -0.14
SS18-225ENST00000585121 ITGB5P18084 799 aa14.15□□□□□ -0.14
SS18-225ENST00000585121 PDIA3P30101 505 aaKnown RBP14.15□□□□□ -0.14
SS18-225ENST00000585121 ZNF76P36508 570 aa14.15□□□□□ -0.14
SS18-225ENST00000585121 TYW1BQ6NUM6 668 aa14.15□□□□□ -0.14
SS18-225ENST00000585121 MXRA8Q9BRK3 442 aa14.15□□□□□ -0.14
SS18-225ENST00000585121 ANO3Q9BYT9 981 aa14.15□□□□□ -0.14
SS18-225ENST00000585121 BCAS3Q9H6U6 928 aa14.15□□□□□ -0.14
SS18-225ENST00000585121 NID2Q14112 1375 aa14.14□□□□□ -0.15
SS18-225ENST00000585121 CPLX1O14810 134 aa14.14□□□□□ -0.15
SS18-225ENST00000585121 KCNA2P16389 499 aa14.14□□□□□ -0.15
SS18-225ENST00000585121 GNA11P29992 359 aa14.14□□□□□ -0.15
SS18-225ENST00000585121 CCT2P78371 535 aaKnown RBP14.14□□□□□ -0.15
SS18-225ENST00000585121 CPLX2Q6PUV4 134 aaKnown RBP14.14□□□□□ -0.15
SS18-225ENST00000585121 LRRC8DQ7L1W4 858 aa14.14□□□□□ -0.15
SS18-225ENST00000585121 TRIM22Q8IYM9 498 aa14.14□□□□□ -0.15
SS18-225ENST00000585121 CCDC148Q8NFR7 591 aa14.14□□□□□ -0.15
SS18-225ENST00000585121 BICD2Q8TD16 824 aa14.14□□□□□ -0.15
SS18-225ENST00000585121 SEPT1Q8WYJ6 367 aa14.14□□□□□ -0.15
SS18-225ENST00000585121 ATP6V0A1Q93050 837 aa14.14□□□□□ -0.15
SS18-225ENST00000585121 SDF4Q9BRK5 362 aa14.14□□□□□ -0.15
SS18-225ENST00000585121 SLC26A6Q9BXS9 759 aa14.14□□□□□ -0.15
SS18-225ENST00000585121 RNF26Q9BY78 433 aaPredicted RBP14.14□□□□□ -0.15
SS18-225ENST00000585121 PDRG1Q9NUG6 133 aa14.14□□□□□ -0.15
SS18-225ENST00000585121 PKD2L1Q9P0L9 805 aa14.14□□□□□ -0.15
SS18-225ENST00000585121 CXXC1Q9P0U4 656 aaPredicted RBP14.14□□□□□ -0.15
SS18-225ENST00000585121 ESYT2A0FGR8 921 aa14.13□□□□□ -0.15
SS18-225ENST00000585121 GRXCR1A8MXD5 290 aa14.13□□□□□ -0.15
SS18-225ENST00000585121 ATP9AO75110 1047 aa14.13□□□□□ -0.15
SS18-225ENST00000585121 SMIM10L2AP0DMW4 78 aa14.13□□□□□ -0.15
SS18-225ENST00000585121 SMIM10L2BP0DMW5 78 aa14.13□□□□□ -0.15
SS18-225ENST00000585121 CKBP12277 381 aa14.13□□□□□ -0.15
SS18-225ENST00000585121 IFNAR1P17181 557 aa14.13□□□□□ -0.15
SS18-225ENST00000585121 TCF7P36402 384 aaPredicted RBP14.13□□□□□ -0.15
SS18-225ENST00000585121 EVCP57679 992 aa14.13□□□□□ -0.15
SS18-225ENST00000585121 RBL2Q08999 1139 aa14.13□□□□□ -0.15
SS18-225ENST00000585121 CEP55Q53EZ4 464 aa14.13□□□□□ -0.15
SS18-225ENST00000585121 JAKMIP3Q5VZ66 844 aa14.13□□□□□ -0.15
SS18-225ENST00000585121 PHKBQ93100 1093 aa14.13□□□□□ -0.15
SS18-225ENST00000585121 PGBD1Q96JS3 809 aa14.13□□□□□ -0.15
SS18-225ENST00000585121 GUCD1Q96NT3 240 aa14.13□□□□□ -0.15
SS18-225ENST00000585121 CDX2Q99626 313 aaPredicted RBP14.13□□□□□ -0.15
SS18-225ENST00000585121 PBX4Q9BYU1 374 aa14.13□□□□□ -0.15
SS18-225ENST00000585121 TTYH1Q9H313 450 aaPredicted RBP14.13□□□□□ -0.15
SS18-225ENST00000585121 BAIAP3O94812 1187 aa14.12□□□□□ -0.15
SS18-225ENST00000585121 ATP2A2P16615 1042 aaKnown RBP14.12□□□□□ -0.15
SS18-225ENST00000585121 SREBF1P36956 1147 aa14.12□□□□□ -0.15
SS18-225ENST00000585121 ZNF200P98182 395 aaPredicted RBP14.12□□□□□ -0.15
SS18-225ENST00000585121 SSRP1Q08945 709 aaKnown RBP14.12□□□□□ -0.15
SS18-225ENST00000585121 DHX38Q92620 1227 aaKnown RBP14.12□□□□□ -0.15
SS18-225ENST00000585121 GLG1Q92896 1179 aa14.12□□□□□ -0.15
SS18-225ENST00000585121 ZNF274Q96GC6 653 aaPredicted RBP14.12□□□□□ -0.15
SS18-225ENST00000585121 CTAGE1Q96RT6 745 aa14.12□□□□□ -0.15
SS18-225ENST00000585121 UPF3BQ9BZI7 483 aaKnown RBP14.12□□□□□ -0.15
SS18-225ENST00000585121 ZMYND12Q9H0C1 365 aa14.12□□□□□ -0.15
SS18-225ENST00000585121 RNPEPQ9H4A4 650 aa14.12□□□□□ -0.15
SS18-225ENST00000585121 ZNF576Q9H609 170 aa14.12□□□□□ -0.15
SS18-225ENST00000585121 JPH1Q9HDC5 661 aaPredicted RBP14.12□□□□□ -0.15
SS18-225ENST00000585121 KCNH7Q9NS40 1196 aa14.12□□□□□ -0.15
SS18-225ENST00000585121 MYH7BA7E2Y1 1941 aa14.12□□□□□ -0.15
SS18-225ENST00000585121 THPOP40225 353 aa14.11□□□□□ -0.15
SS18-225ENST00000585121 KCNJ6P48051 423 aa14.11□□□□□ -0.15
SS18-225ENST00000585121 CLK2P49760 499 aaKnown RBP14.11□□□□□ -0.15
SS18-225ENST00000585121 ARHGAP4P98171 946 aa14.11□□□□□ -0.15
SS18-225ENST00000585121 TOB2Q14106 344 aaPredicted RBP14.11□□□□□ -0.15
SS18-225ENST00000585121 PKN1Q16512 942 aa14.11□□□□□ -0.15
SS18-225ENST00000585121 SERINC5Q86VE9 423 aa14.11□□□□□ -0.15
SS18-225ENST00000585121 TRIM50Q86XT4 487 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms