RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 PPP4R2Q9NY27 417 aa20.68■□□□□ 0.9
SRSF1-208ENST00000584773 NOP56O00567 594 aaKnown RBP20.67■□□□□ 0.9
SRSF1-208ENST00000584773 BFSP2Q13515 415 aa20.67■□□□□ 0.9
SRSF1-208ENST00000584773 NEDD9Q14511 834 aa20.67■□□□□ 0.9
SRSF1-208ENST00000584773 GPNMBQ14956 572 aa20.67■□□□□ 0.9
SRSF1-208ENST00000584773 GRIN2CQ14957 1233 aa20.67■□□□□ 0.9
SRSF1-208ENST00000584773 UTP14CQ5TAP6 766 aaKnown RBP20.67■□□□□ 0.9
SRSF1-208ENST00000584773 XRRA1Q6P2D8 792 aa20.67■□□□□ 0.9
SRSF1-208ENST00000584773 NLRX1Q86UT6 975 aa20.67■□□□□ 0.9
SRSF1-208ENST00000584773 RIC8AQ9NPQ8 531 aa20.67■□□□□ 0.9
SRSF1-208ENST00000584773 YBX2Q9Y2T7 364 aaKnown RBP20.67■□□□□ 0.9
SRSF1-208ENST00000584773 UBIAD1Q9Y5Z9 338 aa20.67■□□□□ 0.9
SRSF1-208ENST00000584773 KCNA2P16389 499 aa20.66■□□□□ 0.9
SRSF1-208ENST00000584773 ADCY7P51828 1080 aa20.66■□□□□ 0.9
SRSF1-208ENST00000584773 TRIM71Q2Q1W2 868 aaKnown RBP20.66■□□□□ 0.9
SRSF1-208ENST00000584773 LARP6Q9BRS8 491 aaKnown RBP20.66■□□□□ 0.9
SRSF1-208ENST00000584773 AGXT2Q9BYV1 514 aa20.66■□□□□ 0.9
SRSF1-208ENST00000584773 BARHL2Q9NY43 387 aa20.66■□□□□ 0.9
SRSF1-208ENST00000584773 MYO9BQ13459 2157 aa20.65■□□□□ 0.9
SRSF1-208ENST00000584773 SMCO2A6NFE2 343 aa20.65■□□□□ 0.9
SRSF1-208ENST00000584773 H3BRB1 525 aa20.65■□□□□ 0.9
SRSF1-208ENST00000584773 CKBP12277 381 aa20.65■□□□□ 0.9
SRSF1-208ENST00000584773 MYOGP15173 224 aa20.65■□□□□ 0.9
SRSF1-208ENST00000584773 RCAN1P53805 252 aa20.65■□□□□ 0.9
SRSF1-208ENST00000584773 TCTN1Q2MV58 587 aa20.65■□□□□ 0.9
SRSF1-208ENST00000584773 PPP1R18Q6NYC8 613 aa20.65■□□□□ 0.9
SRSF1-208ENST00000584773 LRRC8DQ7L1W4 858 aa20.65■□□□□ 0.9
SRSF1-208ENST00000584773 CYP2W1Q8TAV3 490 aa20.65■□□□□ 0.9
SRSF1-208ENST00000584773 CAGE1Q8TC20 777 aa20.65■□□□□ 0.9
SRSF1-208ENST00000584773 PHKBQ93100 1093 aa20.65■□□□□ 0.9
SRSF1-208ENST00000584773 GPRASP2Q96D09 838 aa20.65■□□□□ 0.9
SRSF1-208ENST00000584773 USP26Q9BXU7 913 aa20.65■□□□□ 0.9
SRSF1-208ENST00000584773 FTOQ9C0B1 505 aaKnown RBP eCLIP20.65■□□□□ 0.9
SRSF1-208ENST00000584773 MTIF3Q9H2K0 278 aaKnown RBP20.65■□□□□ 0.9
SRSF1-208ENST00000584773 NKX2-4Q9H2Z4 354 aa20.65■□□□□ 0.9
SRSF1-208ENST00000584773 ZNF576Q9H609 170 aa20.65■□□□□ 0.9
SRSF1-208ENST00000584773 TUT1Q9H6E5 874 aaKnown RBP20.65■□□□□ 0.9
SRSF1-208ENST00000584773 PTPRSQ13332 1948 aa20.65■□□□□ 0.9
SRSF1-208ENST00000584773 NID2Q14112 1375 aa20.65■□□□□ 0.9
SRSF1-208ENST00000584773 SMIM10L2AP0DMW4 78 aa20.64■□□□□ 0.89
SRSF1-208ENST00000584773 SMIM10L2BP0DMW5 78 aa20.64■□□□□ 0.89
SRSF1-208ENST00000584773 SELPP16109 830 aa20.64■□□□□ 0.89
SRSF1-208ENST00000584773 RFC2P35250 354 aa20.64■□□□□ 0.89
SRSF1-208ENST00000584773 CCT2P78371 535 aaKnown RBP20.64■□□□□ 0.89
SRSF1-208ENST00000584773 MTMR1Q13613 665 aa20.64■□□□□ 0.89
SRSF1-208ENST00000584773 TOB2Q14106 344 aaPredicted RBP20.64■□□□□ 0.89
SRSF1-208ENST00000584773 TRAF7Q6Q0C0 670 aa20.64■□□□□ 0.89
SRSF1-208ENST00000584773 CCDC155Q8N6L0 562 aa20.64■□□□□ 0.89
SRSF1-208ENST00000584773 AFAP1L1Q8TED9 768 aa20.64■□□□□ 0.89
SRSF1-208ENST00000584773 SENP7Q9BQF6 1050 aa20.64■□□□□ 0.89
SRSF1-208ENST00000584773 ANO3Q9BYT9 981 aa20.64■□□□□ 0.89
SRSF1-208ENST00000584773 NCOA5Q9HCD5 579 aaKnown RBP20.64■□□□□ 0.89
SRSF1-208ENST00000584773 SLC4A7Q9Y6M7 1214 aa20.64■□□□□ 0.89
SRSF1-208ENST00000584773 CHD9Q3L8U1 2897 aa20.63■□□□□ 0.89
SRSF1-208ENST00000584773 TMEM265A0A087WTH1 108 aa20.63■□□□□ 0.89
SRSF1-208ENST00000584773 NBNO60934 754 aa20.63■□□□□ 0.89
SRSF1-208ENST00000584773 PFKMP08237 780 aa20.63■□□□□ 0.89
SRSF1-208ENST00000584773 PSMA5P28066 241 aa20.63■□□□□ 0.89
SRSF1-208ENST00000584773 PTK7Q13308 1070 aa20.63■□□□□ 0.89
SRSF1-208ENST00000584773 PKN1Q16512 942 aa20.63■□□□□ 0.89
SRSF1-208ENST00000584773 PFKFB3Q16875 520 aaPredicted RBP20.63■□□□□ 0.89
SRSF1-208ENST00000584773 ZNF618Q5T7W0 954 aa20.63■□□□□ 0.89
SRSF1-208ENST00000584773 SLC17A8Q8NDX2 589 aa20.63■□□□□ 0.89
SRSF1-208ENST00000584773 UPF3BQ9BZI7 483 aaKnown RBP20.63■□□□□ 0.89
SRSF1-208ENST00000584773 JADE2Q9NQC1 790 aa20.63■□□□□ 0.89
SRSF1-208ENST00000584773 C17orf102A2RUQ5 167 aa20.62■□□□□ 0.89
SRSF1-208ENST00000584773 TREHO43280 583 aa20.62■□□□□ 0.89
SRSF1-208ENST00000584773 SCG2P13521 617 aa20.62■□□□□ 0.89
SRSF1-208ENST00000584773 PDIA3P30101 505 aaKnown RBP20.62■□□□□ 0.89
SRSF1-208ENST00000584773 TCF7P36402 384 aaPredicted RBP20.62■□□□□ 0.89
SRSF1-208ENST00000584773 CLK2P49760 499 aaKnown RBP20.62■□□□□ 0.89
SRSF1-208ENST00000584773 RBL2Q08999 1139 aa20.62■□□□□ 0.89
SRSF1-208ENST00000584773 MBTPS1Q14703 1052 aa20.62■□□□□ 0.89
SRSF1-208ENST00000584773 NTRK3Q16288 839 aa20.62■□□□□ 0.89
SRSF1-208ENST00000584773 JAKMIP3Q5VZ66 844 aa20.62■□□□□ 0.89
SRSF1-208ENST00000584773 RUFY3Q7L099 469 aa20.62■□□□□ 0.89
SRSF1-208ENST00000584773 FBXL16Q8N461 479 aa20.62■□□□□ 0.89
SRSF1-208ENST00000584773 RNPEPQ9H4A4 650 aa20.62■□□□□ 0.89
SRSF1-208ENST00000584773 ZSWIM6Q9HCJ5 1215 aa20.62■□□□□ 0.89
SRSF1-208ENST00000584773 SETD4Q9NVD3 440 aa20.62■□□□□ 0.89
SRSF1-208ENST00000584773 GSTTP1A0A1W2PQM5 241 aa20.61■□□□□ 0.89
SRSF1-208ENST00000584773 hCG_1984214I3L0E3 225 aa20.61■□□□□ 0.89
SRSF1-208ENST00000584773 ARP10275 920 aa20.61■□□□□ 0.89
SRSF1-208ENST00000584773 FOSL2P15408 326 aa20.61■□□□□ 0.89
SRSF1-208ENST00000584773 ATP2A2P16615 1042 aaKnown RBP20.61■□□□□ 0.89
SRSF1-208ENST00000584773 HOXC8P31273 242 aa20.61■□□□□ 0.89
SRSF1-208ENST00000584773 TMCO2Q7Z6W1 182 aaPredicted RBP20.61■□□□□ 0.89
SRSF1-208ENST00000584773 ZNF713Q8N859 430 aaPredicted RBP20.61■□□□□ 0.89
SRSF1-208ENST00000584773 ATP6V0A1Q93050 837 aa20.61■□□□□ 0.89
SRSF1-208ENST00000584773 MXRA8Q9BRK3 442 aa20.61■□□□□ 0.89
SRSF1-208ENST00000584773 EHMT1Q9H9B1 1298 aa20.61■□□□□ 0.89
SRSF1-208ENST00000584773 MSRAQ9UJ68 235 aa20.61■□□□□ 0.89
SRSF1-208ENST00000584773 UNC80Q8N2C7 3258 aa20.6■□□□□ 0.89
SRSF1-208ENST00000584773 PRUNE2Q8WUY3 3088 aa20.6■□□□□ 0.89
SRSF1-208ENST00000584773 CCDC196A0A1B0GTZ2 297 aa20.6■□□□□ 0.89
SRSF1-208ENST00000584773 ACTN1P12814 892 aa20.6■□□□□ 0.89
SRSF1-208ENST00000584773 MARK3P27448 753 aa20.6■□□□□ 0.89
SRSF1-208ENST00000584773 RAB30Q15771 203 aa20.6■□□□□ 0.89
SRSF1-208ENST00000584773 SERINC5Q86VE9 423 aa20.6■□□□□ 0.89
SRSF1-208ENST00000584773 CDHR1Q96JP9 859 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms