RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 KIAA0895Q8NCT3 520 aa11.41□□□□□ -0.58
RFFL-212ENST00000584655 KIF18AQ8NI77 898 aa11.41□□□□□ -0.58
RFFL-212ENST00000584655 RUSC1Q9BVN2 902 aa11.41□□□□□ -0.58
RFFL-212ENST00000584655 VCPKMTQ9H867 229 aa11.41□□□□□ -0.58
RFFL-212ENST00000584655 BLOC1S4Q9NUP1 217 aa11.41□□□□□ -0.58
RFFL-212ENST00000584655 COL20A1Q9P218 1284 aa11.41□□□□□ -0.58
RFFL-212ENST00000584655 HDAC6Q9UBN7 1215 aa11.41□□□□□ -0.58
RFFL-212ENST00000584655 HYOU1Q9Y4L1 999 aa11.41□□□□□ -0.58
RFFL-212ENST00000584655 IPO7O95373 1038 aaKnown RBP11.41□□□□□ -0.58
RFFL-212ENST00000584655 VCAM1P19320 739 aa11.41□□□□□ -0.58
RFFL-212ENST00000584655 E2F4Q16254 413 aa11.41□□□□□ -0.58
RFFL-212ENST00000584655 ZNF658Q5TYW1 1059 aaPredicted RBP11.41□□□□□ -0.58
RFFL-212ENST00000584655 VSTM4Q8IW00 320 aa11.41□□□□□ -0.58
RFFL-212ENST00000584655 TIGD1Q96MW7 591 aa11.41□□□□□ -0.58
RFFL-212ENST00000584655 ZNF500O60304 480 aaPredicted RBP11.41□□□□□ -0.58
RFFL-212ENST00000584655 ATP9AO75110 1047 aa11.41□□□□□ -0.58
RFFL-212ENST00000584655 POLR2FP61218 127 aaKnown RBP11.41□□□□□ -0.58
RFFL-212ENST00000584655 ODR4Q5SWX8 454 aa11.41□□□□□ -0.58
RFFL-212ENST00000584655 DPH6Q7L8W6 267 aa11.41□□□□□ -0.58
RFFL-212ENST00000584655 RNF146Q9NTX7 359 aa11.41□□□□□ -0.58
RFFL-212ENST00000584655 LUC7L2Q9Y383 392 aaKnown RBP11.41□□□□□ -0.58
RFFL-212ENST00000584655 EPHB6O15197 1021 aa11.4□□□□□ -0.58
RFFL-212ENST00000584655 FAM193AP78312 1265 aa11.4□□□□□ -0.58
RFFL-212ENST00000584655 TCP11X2Q5H9J9 407 aa11.4□□□□□ -0.58
RFFL-212ENST00000584655 RAD9BQ6WBX8 426 aa11.4□□□□□ -0.58
RFFL-212ENST00000584655 ADAT2Q7Z6V5 191 aaKnown RBP11.4□□□□□ -0.58
RFFL-212ENST00000584655 WDR18Q9BV38 432 aa11.4□□□□□ -0.58
RFFL-212ENST00000584655 IPO5O00410 1097 aaKnown RBP11.4□□□□□ -0.58
RFFL-212ENST00000584655 HIRAP54198 1017 aaPredicted RBP11.4□□□□□ -0.58
RFFL-212ENST00000584655 COASYQ13057 564 aa11.4□□□□□ -0.58
RFFL-212ENST00000584655 ADAM9Q13443 819 aa11.4□□□□□ -0.58
RFFL-212ENST00000584655 Q3C1V9 767 aa11.4□□□□□ -0.58
RFFL-212ENST00000584655 C15orf52Q6ZUT6 534 aaKnown RBP11.4□□□□□ -0.58
RFFL-212ENST00000584655 MIER3Q7Z3K6 550 aa11.4□□□□□ -0.58
RFFL-212ENST00000584655 ENOX1Q8TC92 643 aaKnown RBP11.4□□□□□ -0.58
RFFL-212ENST00000584655 P2RX5Q93086 422 aa11.4□□□□□ -0.58
RFFL-212ENST00000584655 BICD1Q96G01 975 aa11.4□□□□□ -0.58
RFFL-212ENST00000584655 EIF2AK1Q9BQI3 630 aaKnown RBP11.4□□□□□ -0.58
RFFL-212ENST00000584655 REEP2Q9BRK0 252 aa11.4□□□□□ -0.58
RFFL-212ENST00000584655 IDI2Q9BXS1 227 aa11.4□□□□□ -0.58
RFFL-212ENST00000584655 PCDH10Q9P2E7 1040 aa11.4□□□□□ -0.58
RFFL-212ENST00000584655 PPP2R2CQ9Y2T4 447 aa11.4□□□□□ -0.58
RFFL-212ENST00000584655 ARHGEF35A5YM69 484 aa11.4□□□□□ -0.58
RFFL-212ENST00000584655 NR2F2P24468 414 aa11.4□□□□□ -0.58
RFFL-212ENST00000584655 XKR9Q5GH70 373 aa11.4□□□□□ -0.58
RFFL-212ENST00000584655 CAGE1Q8TC20 777 aa11.4□□□□□ -0.58
RFFL-212ENST00000584655 SEMA6BQ9H3T3 888 aa11.4□□□□□ -0.58
RFFL-212ENST00000584655 RMND1Q9NWS8 449 aa11.4□□□□□ -0.58
RFFL-212ENST00000584655 NYAP2Q9P242 653 aa11.4□□□□□ -0.58
RFFL-212ENST00000584655 RABGAP1Q9Y3P9 1069 aa11.4□□□□□ -0.58
RFFL-212ENST00000584655 EDIL3O43854 480 aa11.39□□□□□ -0.59
RFFL-212ENST00000584655 TRAPPC10P48553 1259 aa11.39□□□□□ -0.59
RFFL-212ENST00000584655 ZNF579Q8NAF0 562 aaKnown RBP11.39□□□□□ -0.59
RFFL-212ENST00000584655 DCPSQ96C86 337 aaKnown RBP11.39□□□□□ -0.59
RFFL-212ENST00000584655 JADE2Q9NQC1 790 aa11.39□□□□□ -0.59
RFFL-212ENST00000584655 CYP2C8P10632 490 aa11.39□□□□□ -0.59
RFFL-212ENST00000584655 GSDMDP57764 484 aa11.39□□□□□ -0.59
RFFL-212ENST00000584655 TRIM50Q86XT4 487 aa11.39□□□□□ -0.59
RFFL-212ENST00000584655 MYOCDQ8IZQ8 938 aa11.39□□□□□ -0.59
RFFL-212ENST00000584655 GTPBP4Q9BZE4 634 aaKnown RBP11.39□□□□□ -0.59
RFFL-212ENST00000584655 BRWD3Q6RI45 1802 aa11.39□□□□□ -0.59
RFFL-212ENST00000584655 DUOX1Q9NRD9 1551 aa11.39□□□□□ -0.59
RFFL-212ENST00000584655 DLATP10515 647 aaKnown RBP11.39□□□□□ -0.59
RFFL-212ENST00000584655 MTERF2Q49AM1 385 aa11.39□□□□□ -0.59
RFFL-212ENST00000584655 RNF207Q6ZRF8 634 aa11.39□□□□□ -0.59
RFFL-212ENST00000584655 SAAL1Q96ER3 474 aa11.39□□□□□ -0.59
RFFL-212ENST00000584655 TCHPQ9BT92 498 aa11.39□□□□□ -0.59
RFFL-212ENST00000584655 TMOD4Q9NZQ9 345 aa11.39□□□□□ -0.59
RFFL-212ENST00000584655 PACSIN2Q9UNF0 486 aaPredicted RBP11.39□□□□□ -0.59
RFFL-212ENST00000584655 GYPCP04921 128 aa11.38□□□□□ -0.59
RFFL-212ENST00000584655 IRX3P78415 501 aaPredicted RBP11.38□□□□□ -0.59
RFFL-212ENST00000584655 FAM182AQ5T1J6 154 aa11.38□□□□□ -0.59
RFFL-212ENST00000584655 TC2NQ8N9U0 490 aa11.38□□□□□ -0.59
RFFL-212ENST00000584655 RGS22Q8NE09 1264 aa11.38□□□□□ -0.59
RFFL-212ENST00000584655 RAD54LQ92698 747 aa11.38□□□□□ -0.59
RFFL-212ENST00000584655 LXNQ9BS40 222 aa11.38□□□□□ -0.59
RFFL-212ENST00000584655 EMILIN3Q9NT22 766 aa11.38□□□□□ -0.59
RFFL-212ENST00000584655 ZNHIT6Q9NWK9 470 aaKnown RBP11.38□□□□□ -0.59
RFFL-212ENST00000584655 COL22A1Q8NFW1 1626 aaPredicted RBP11.38□□□□□ -0.59
RFFL-212ENST00000584655 TMEM110-MUSTN1A8MSY1 372 aa11.38□□□□□ -0.59
RFFL-212ENST00000584655 ABCB4P21439 1286 aa11.38□□□□□ -0.59
RFFL-212ENST00000584655 CASQ1P31415 396 aa11.38□□□□□ -0.59
RFFL-212ENST00000584655 NOP2P46087 812 aaKnown RBP11.38□□□□□ -0.59
RFFL-212ENST00000584655 PEX3P56589 373 aa11.38□□□□□ -0.59
RFFL-212ENST00000584655 PPP2R3AQ06190 1150 aa11.38□□□□□ -0.59
RFFL-212ENST00000584655 ZSWIM2Q8NEG5 633 aa11.38□□□□□ -0.59
RFFL-212ENST00000584655 SPAG5Q96R06 1193 aa11.38□□□□□ -0.59
RFFL-212ENST00000584655 ACP6Q9NPH0 428 aa11.38□□□□□ -0.59
RFFL-212ENST00000584655 OPLAHO14841 1288 aa11.38□□□□□ -0.59
RFFL-212ENST00000584655 ZBED4O75132 1171 aa11.38□□□□□ -0.59
RFFL-212ENST00000584655 ENTPD3O75355 529 aa11.38□□□□□ -0.59
RFFL-212ENST00000584655 CAVIN2O95810 425 aa11.38□□□□□ -0.59
RFFL-212ENST00000584655 TNFAIP1Q13829 316 aa11.38□□□□□ -0.59
RFFL-212ENST00000584655 TREML2Q5T2D2 321 aa11.38□□□□□ -0.59
RFFL-212ENST00000584655 ERMNQ8TAM6 284 aa11.38□□□□□ -0.59
RFFL-212ENST00000584655 TSG101Q99816 390 aa11.38□□□□□ -0.59
RFFL-212ENST00000584655 LSM14BQ9BX40 385 aaKnown RBP11.38□□□□□ -0.59
RFFL-212ENST00000584655 KCNH7Q9NS40 1196 aa11.38□□□□□ -0.59
RFFL-212ENST00000584655 EHD2Q9NZN4 543 aa11.38□□□□□ -0.59
RFFL-212ENST00000584655 SLC16A4O15374 487 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms