RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 CDX2Q99626 313 aaPredicted RBP24.59■■□□□ 1.53
PPP4R1-228ENST00000584074 TUT1Q9H6E5 874 aaKnown RBP24.59■■□□□ 1.53
PPP4R1-228ENST00000584074 UBIAD1Q9Y5Z9 338 aa24.59■■□□□ 1.53
PPP4R1-228ENST00000584074 SMCO2A6NFE2 343 aa24.58■■□□□ 1.53
PPP4R1-228ENST00000584074 hCG_1984214I3L0E3 225 aa24.58■■□□□ 1.53
PPP4R1-228ENST00000584074 PFKMP08237 780 aa24.58■■□□□ 1.53
PPP4R1-228ENST00000584074 RFC2P35250 354 aa24.58■■□□□ 1.53
PPP4R1-228ENST00000584074 ADCY7P51828 1080 aa24.58■■□□□ 1.53
PPP4R1-228ENST00000584074 RUFY3Q7L099 469 aa24.58■■□□□ 1.53
PPP4R1-228ENST00000584074 CCDC155Q8N6L0 562 aa24.58■■□□□ 1.53
PPP4R1-228ENST00000584074 ZNF713Q8N859 430 aaPredicted RBP24.58■■□□□ 1.53
PPP4R1-228ENST00000584074 CAGE1Q8TC20 777 aa24.58■■□□□ 1.53
PPP4R1-228ENST00000584074 PGBD1Q96JS3 809 aa24.58■■□□□ 1.53
PPP4R1-228ENST00000584074 PBX4Q9BYU1 374 aa24.58■■□□□ 1.53
PPP4R1-228ENST00000584074 ZSWIM6Q9HCJ5 1215 aa24.58■■□□□ 1.53
PPP4R1-228ENST00000584074 NID2Q14112 1375 aa24.57■■□□□ 1.52
PPP4R1-228ENST00000584074 KCNA2P16389 499 aa24.57■■□□□ 1.52
PPP4R1-228ENST00000584074 PFKFB3Q16875 520 aaPredicted RBP24.57■■□□□ 1.52
PPP4R1-228ENST00000584074 GIMAP8Q8ND71 665 aaPredicted RBP24.57■■□□□ 1.52
PPP4R1-228ENST00000584074 AFAP1L1Q8TED9 768 aa24.57■■□□□ 1.52
PPP4R1-228ENST00000584074 TIFAQ96CG3 184 aa24.57■■□□□ 1.52
PPP4R1-228ENST00000584074 CDHR1Q96JP9 859 aa24.57■■□□□ 1.52
PPP4R1-228ENST00000584074 EHMT1Q9H9B1 1298 aa24.57■■□□□ 1.52
PPP4R1-228ENST00000584074 TMEM260Q9NX78 707 aa24.57■■□□□ 1.52
PPP4R1-228ENST00000584074 PKD2L1Q9P0L9 805 aa24.57■■□□□ 1.52
PPP4R1-228ENST00000584074 SLC4A7Q9Y6M7 1214 aa24.57■■□□□ 1.52
PPP4R1-228ENST00000584074 CHD9Q3L8U1 2897 aa24.57■■□□□ 1.52
PPP4R1-228ENST00000584074 TMEM265A0A087WTH1 108 aa24.56■■□□□ 1.52
PPP4R1-228ENST00000584074 ZBBXA8MT70 800 aa24.56■■□□□ 1.52
PPP4R1-228ENST00000584074 PPFIA3O75145 1194 aa24.56■■□□□ 1.52
PPP4R1-228ENST00000584074 SCG2P13521 617 aa24.56■■□□□ 1.52
PPP4R1-228ENST00000584074 PTK7Q13308 1070 aa24.56■■□□□ 1.52
PPP4R1-228ENST00000584074 MTMR1Q13613 665 aa24.56■■□□□ 1.52
PPP4R1-228ENST00000584074 UTP14CQ5TAP6 766 aaKnown RBP24.56■■□□□ 1.52
PPP4R1-228ENST00000584074 TRIM50Q86XT4 487 aa24.56■■□□□ 1.52
PPP4R1-228ENST00000584074 WNT8BQ93098 351 aa24.56■■□□□ 1.52
PPP4R1-228ENST00000584074 PHKBQ93100 1093 aa24.56■■□□□ 1.52
PPP4R1-228ENST00000584074 FTOQ9C0B1 505 aaKnown RBP eCLIP24.56■■□□□ 1.52
PPP4R1-228ENST00000584074 JADE2Q9NQC1 790 aa24.56■■□□□ 1.52
PPP4R1-228ENST00000584074 EYSQ5T1H1 3165 aa24.56■■□□□ 1.52
PPP4R1-228ENST00000584074 FOSP01100 380 aaPredicted RBP24.55■■□□□ 1.52
PPP4R1-228ENST00000584074 SMIM10L2AP0DMW4 78 aa24.55■■□□□ 1.52
PPP4R1-228ENST00000584074 SMIM10L2BP0DMW5 78 aa24.55■■□□□ 1.52
PPP4R1-228ENST00000584074 CKBP12277 381 aa24.55■■□□□ 1.52
PPP4R1-228ENST00000584074 SELPP16109 830 aa24.55■■□□□ 1.52
PPP4R1-228ENST00000584074 PDIA3P30101 505 aaKnown RBP24.55■■□□□ 1.52
PPP4R1-228ENST00000584074 TOB2Q14106 344 aaPredicted RBP24.55■■□□□ 1.52
PPP4R1-228ENST00000584074 LRRC8DQ7L1W4 858 aa24.55■■□□□ 1.52
PPP4R1-228ENST00000584074 TEX2Q8IWB9 1127 aa24.55■■□□□ 1.52
PPP4R1-228ENST00000584074 CYP2W1Q8TAV3 490 aa24.55■■□□□ 1.52
PPP4R1-228ENST00000584074 ANO3Q9BYT9 981 aa24.55■■□□□ 1.52
PPP4R1-228ENST00000584074 NCOA5Q9HCD5 579 aaKnown RBP24.55■■□□□ 1.52
PPP4R1-228ENST00000584074 CYP46A1Q9Y6A2 500 aa24.55■■□□□ 1.52
PPP4R1-228ENST00000584074 PRPF3O43395 683 aaKnown RBP24.54■■□□□ 1.52
PPP4R1-228ENST00000584074 CLK2P49760 499 aaKnown RBP24.54■■□□□ 1.52
PPP4R1-228ENST00000584074 EVCP57679 992 aa24.54■■□□□ 1.52
PPP4R1-228ENST00000584074 CCT2P78371 535 aaKnown RBP24.54■■□□□ 1.52
PPP4R1-228ENST00000584074 RBL2Q08999 1139 aa24.54■■□□□ 1.52
PPP4R1-228ENST00000584074 GPNMBQ14956 572 aa24.54■■□□□ 1.52
PPP4R1-228ENST00000584074 NTRK3Q16288 839 aa24.54■■□□□ 1.52
PPP4R1-228ENST00000584074 PKN1Q16512 942 aa24.54■■□□□ 1.52
PPP4R1-228ENST00000584074 TRIM71Q2Q1W2 868 aaKnown RBP24.54■■□□□ 1.52
PPP4R1-228ENST00000584074 MYLIPQ8WY64 445 aa24.54■■□□□ 1.52
PPP4R1-228ENST00000584074 MXRA8Q9BRK3 442 aa24.54■■□□□ 1.52
PPP4R1-228ENST00000584074 UPF3BQ9BZI7 483 aaKnown RBP24.54■■□□□ 1.52
PPP4R1-228ENST00000584074 ZNF576Q9H609 170 aa24.54■■□□□ 1.52
PPP4R1-228ENST00000584074 SCN5AQ14524 2016 aa24.53■■□□□ 1.52
PPP4R1-228ENST00000584074 C17orf102A2RUQ5 167 aa24.53■■□□□ 1.52
PPP4R1-228ENST00000584074 RBAK-RBAKDNI3L0D1 243 aa24.53■■□□□ 1.52
PPP4R1-228ENST00000584074 CENPBP07199 599 aaPredicted RBP24.53■■□□□ 1.52
PPP4R1-228ENST00000584074 ACTN1P12814 892 aa24.53■■□□□ 1.52
PPP4R1-228ENST00000584074 GRIN2CQ14957 1233 aa24.53■■□□□ 1.52
PPP4R1-228ENST00000584074 LARP6Q9BRS8 491 aaKnown RBP24.53■■□□□ 1.52
PPP4R1-228ENST00000584074 TM6SF1Q9BZW5 370 aa24.53■■□□□ 1.52
PPP4R1-228ENST00000584074 GLT8D2Q9H1C3 349 aa24.53■■□□□ 1.52
PPP4R1-228ENST00000584074 RNPEPQ9H4A4 650 aa24.53■■□□□ 1.52
PPP4R1-228ENST00000584074 ADAMTS3O15072 1205 aa24.52■■□□□ 1.52
PPP4R1-228ENST00000584074 MAFGO15525 162 aa24.52■■□□□ 1.52
PPP4R1-228ENST00000584074 HOXC8P31273 242 aa24.52■■□□□ 1.52
PPP4R1-228ENST00000584074 TCF7P36402 384 aaPredicted RBP24.52■■□□□ 1.52
PPP4R1-228ENST00000584074 RABGGTBP53611 331 aa24.52■■□□□ 1.52
PPP4R1-228ENST00000584074 AP3B2Q13367 1082 aa24.52■■□□□ 1.52
PPP4R1-228ENST00000584074 ZNF618Q5T7W0 954 aa24.52■■□□□ 1.52
PPP4R1-228ENST00000584074 JAKMIP3Q5VZ66 844 aa24.52■■□□□ 1.52
PPP4R1-228ENST00000584074 SERINC5Q86VE9 423 aa24.52■■□□□ 1.52
PPP4R1-228ENST00000584074 ATP6V0A1Q93050 837 aa24.52■■□□□ 1.52
PPP4R1-228ENST00000584074 KCNH7Q9NS40 1196 aa24.52■■□□□ 1.52
PPP4R1-228ENST00000584074 MSRAQ9UJ68 235 aa24.52■■□□□ 1.52
PPP4R1-228ENST00000584074 YBX2Q9Y2T7 364 aaKnown RBP24.52■■□□□ 1.52
PPP4R1-228ENST00000584074 TANC1Q9C0D5 1861 aa24.51■■□□□ 1.51
PPP4R1-228ENST00000584074 DOCK5Q9H7D0 1870 aa24.51■■□□□ 1.51
PPP4R1-228ENST00000584074 GSTTP1A0A1W2PQM5 241 aa24.51■■□□□ 1.51
PPP4R1-228ENST00000584074 ATP2A2P16615 1042 aaKnown RBP24.51■■□□□ 1.51
PPP4R1-228ENST00000584074 SREBF1P36956 1147 aa24.51■■□□□ 1.51
PPP4R1-228ENST00000584074 AKAP17AQ02040 695 aaKnown RBP24.51■■□□□ 1.51
PPP4R1-228ENST00000584074 RAB30Q15771 203 aa24.51■■□□□ 1.51
PPP4R1-228ENST00000584074 TRAF7Q6Q0C0 670 aa24.51■■□□□ 1.51
PPP4R1-228ENST00000584074 SLC26A6Q9BXS9 759 aa24.51■■□□□ 1.51
PPP4R1-228ENST00000584074 ZMYND12Q9H0C1 365 aa24.51■■□□□ 1.51
PPP4R1-228ENST00000584074 SETD4Q9NVD3 440 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms