RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 RAD21O60216 631 aa11.24□□□□□ -0.61
MKS1-212ENST00000583577 ACVR2BQ13705 512 aa11.24□□□□□ -0.61
MKS1-212ENST00000583577 STX1AQ16623 288 aa11.24□□□□□ -0.61
MKS1-212ENST00000583577 CCDC178Q5BJE1 867 aa11.24□□□□□ -0.61
MKS1-212ENST00000583577 KIAA1755Q5JYT7 1200 aa11.24□□□□□ -0.61
MKS1-212ENST00000583577 RALYLQ86SE5 291 aaKnown RBP11.24□□□□□ -0.61
MKS1-212ENST00000583577 IQCA1Q86XH1 822 aa11.24□□□□□ -0.61
MKS1-212ENST00000583577 SIAH1Q8IUQ4 282 aa11.24□□□□□ -0.61
MKS1-212ENST00000583577 NEK9Q8TD19 979 aa11.24□□□□□ -0.61
MKS1-212ENST00000583577 CHAMP1Q96JM3 812 aa11.24□□□□□ -0.61
MKS1-212ENST00000583577 FTOQ9C0B1 505 aaKnown RBP eCLIP11.24□□□□□ -0.61
MKS1-212ENST00000583577 VCPKMTQ9H867 229 aa11.24□□□□□ -0.61
MKS1-212ENST00000583577 SUGCTQ9HAC7 445 aa11.24□□□□□ -0.61
MKS1-212ENST00000583577 DACT1Q9NYF0 836 aa11.24□□□□□ -0.61
MKS1-212ENST00000583577 PRKAG3Q9UGI9 489 aa11.24□□□□□ -0.61
MKS1-212ENST00000583577 STX8Q9UNK0 236 aa11.24□□□□□ -0.61
MKS1-212ENST00000583577 FAM50BQ9Y247 325 aa11.24□□□□□ -0.61
MKS1-212ENST00000583577 COL4A6Q14031 1691 aa11.24□□□□□ -0.61
MKS1-212ENST00000583577 TANC1Q9C0D5 1861 aa11.23□□□□□ -0.61
MKS1-212ENST00000583577 A0A1W2PQ27 194 aa11.23□□□□□ -0.61
MKS1-212ENST00000583577 A0A1W2PQ64 194 aa11.23□□□□□ -0.61
MKS1-212ENST00000583577 A0A1W2PQD8 194 aa11.23□□□□□ -0.61
MKS1-212ENST00000583577 TMEM221A6NGB7 291 aa11.23□□□□□ -0.61
MKS1-212ENST00000583577 E7EWF7 191 aa11.23□□□□□ -0.61
MKS1-212ENST00000583577 GOLGA6L19H0YKK7 550 aa11.23□□□□□ -0.61
MKS1-212ENST00000583577 M0R296 226 aa11.23□□□□□ -0.61
MKS1-212ENST00000583577 CTIFO43310 598 aaKnown RBP11.23□□□□□ -0.61
MKS1-212ENST00000583577 CYP2C9P11712 490 aa11.23□□□□□ -0.61
MKS1-212ENST00000583577 KCNJ6P48051 423 aa11.23□□□□□ -0.61
MKS1-212ENST00000583577 GSDMDP57764 484 aa11.23□□□□□ -0.61
MKS1-212ENST00000583577 PSMC6P62333 389 aa11.23□□□□□ -0.61
MKS1-212ENST00000583577 HERC4Q5GLZ8 1057 aaPredicted RBP11.23□□□□□ -0.61
MKS1-212ENST00000583577 CCDC73Q6ZRK6 1079 aa11.23□□□□□ -0.61
MKS1-212ENST00000583577 ASCL5Q7RTU5 278 aa11.23□□□□□ -0.61
MKS1-212ENST00000583577 TMCO2Q7Z6W1 182 aaPredicted RBP11.23□□□□□ -0.61
MKS1-212ENST00000583577 ADHFE1Q8IWW8 467 aa11.23□□□□□ -0.61
MKS1-212ENST00000583577 SPICE1Q8N0Z3 855 aa11.23□□□□□ -0.61
MKS1-212ENST00000583577 NCOA7Q8NI08 942 aa11.23□□□□□ -0.61
MKS1-212ENST00000583577 BICD2Q8TD16 824 aa11.23□□□□□ -0.61
MKS1-212ENST00000583577 MKL1Q969V6 931 aa11.23□□□□□ -0.61
MKS1-212ENST00000583577 BPIFA3Q9BQP9 254 aa11.23□□□□□ -0.61
MKS1-212ENST00000583577 ZBED2Q9BTP6 218 aa11.23□□□□□ -0.61
MKS1-212ENST00000583577 TCP11L1Q9NUJ3 509 aa11.23□□□□□ -0.61
MKS1-212ENST00000583577 ANO10Q9NW15 660 aa11.23□□□□□ -0.61
MKS1-212ENST00000583577 FAM13BQ9NYF5 915 aa11.23□□□□□ -0.61
MKS1-212ENST00000583577 IMPACTQ9P2X3 320 aa11.23□□□□□ -0.61
MKS1-212ENST00000583577 SYNPO2Q9UMS6 1093 aa11.23□□□□□ -0.61
MKS1-212ENST00000583577 GRIN2DO15399 1336 aa11.23□□□□□ -0.61
MKS1-212ENST00000583577 ZFHX4Q86UP3 3567 aa11.22□□□□□ -0.61
MKS1-212ENST00000583577 SMTNL1A8MU46 457 aa11.22□□□□□ -0.61
MKS1-212ENST00000583577 WDR46O15213 610 aaKnown RBP11.22□□□□□ -0.61
MKS1-212ENST00000583577 NRDCO43847 1150 aa11.22□□□□□ -0.61
MKS1-212ENST00000583577 NMT2O60551 498 aa11.22□□□□□ -0.61
MKS1-212ENST00000583577 RGS20O76081 388 aa11.22□□□□□ -0.61
MKS1-212ENST00000583577 CPA1P15085 419 aa11.22□□□□□ -0.61
MKS1-212ENST00000583577 ZNF165P49910 485 aa11.22□□□□□ -0.61
MKS1-212ENST00000583577 ZNF75DP51815 510 aa11.22□□□□□ -0.61
MKS1-212ENST00000583577 FGD1P98174 961 aa11.22□□□□□ -0.61
MKS1-212ENST00000583577 EXOSC10Q01780 885 aaKnown RBP11.22□□□□□ -0.61
MKS1-212ENST00000583577 Q6ZUG5 572 aa11.22□□□□□ -0.61
MKS1-212ENST00000583577 BMP8AQ7Z5Y6 402 aa11.22□□□□□ -0.61
MKS1-212ENST00000583577 RNF135Q8IUD6 432 aa11.22□□□□□ -0.61
MKS1-212ENST00000583577 RIOX2Q8IUF8 465 aa11.22□□□□□ -0.61
MKS1-212ENST00000583577 MSL3Q8N5Y2 521 aaKnown RBP11.22□□□□□ -0.61
MKS1-212ENST00000583577 NECAB1Q8N987 351 aa11.22□□□□□ -0.61
MKS1-212ENST00000583577 EDAQ92838 391 aa11.22□□□□□ -0.61
MKS1-212ENST00000583577 DDX11Q96FC9 970 aa11.22□□□□□ -0.61
MKS1-212ENST00000583577 UBAC1Q9BSL1 405 aa11.22□□□□□ -0.61
MKS1-212ENST00000583577 CBX8Q9HC52 389 aa11.22□□□□□ -0.61
MKS1-212ENST00000583577 IL17RBQ9NRM6 502 aa11.22□□□□□ -0.61
MKS1-212ENST00000583577 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.22□□□□□ -0.61
MKS1-212ENST00000583577 ZSWIM5Q9P217 1185 aa11.22□□□□□ -0.61
MKS1-212ENST00000583577 ERICH2A1L162 156 aa11.21□□□□□ -0.61
MKS1-212ENST00000583577 F5H6K3 240 aa11.21□□□□□ -0.61
MKS1-212ENST00000583577 H0Y858 1186 aa11.21□□□□□ -0.61
MKS1-212ENST00000583577 CABYRO75952 493 aa11.21□□□□□ -0.61
MKS1-212ENST00000583577 YEATS4O95619 227 aa11.21□□□□□ -0.61
MKS1-212ENST00000583577 TOP1P11387 765 aaKnown RBP11.21□□□□□ -0.61
MKS1-212ENST00000583577 STAT3P40763 770 aa11.21□□□□□ -0.61
MKS1-212ENST00000583577 TPM4P67936 248 aa11.21□□□□□ -0.61
MKS1-212ENST00000583577 FAM160A1Q05DH4 1040 aa11.21□□□□□ -0.61
MKS1-212ENST00000583577 KLRC3Q07444 240 aa11.21□□□□□ -0.61
MKS1-212ENST00000583577 SART3Q15020 963 aaKnown RBP11.21□□□□□ -0.61
MKS1-212ENST00000583577 PKN1Q16512 942 aa11.21□□□□□ -0.61
MKS1-212ENST00000583577 FOXD4L6Q3SYB3 417 aaPredicted RBP11.21□□□□□ -0.61
MKS1-212ENST00000583577 ANO6Q4KMQ2 910 aa11.21□□□□□ -0.61
MKS1-212ENST00000583577 FOXD4L3Q6VB84 417 aaPredicted RBP11.21□□□□□ -0.61
MKS1-212ENST00000583577 TRIM67Q6ZTA4 783 aa11.21□□□□□ -0.61
MKS1-212ENST00000583577 BRAPQ7Z569 592 aa11.21□□□□□ -0.61
MKS1-212ENST00000583577 LRRC47Q8N1G4 583 aaKnown RBP11.21□□□□□ -0.61
MKS1-212ENST00000583577 GMCL1P1Q8NEA9 526 aa11.21□□□□□ -0.61
MKS1-212ENST00000583577 BRF1Q92994 677 aa11.21□□□□□ -0.61
MKS1-212ENST00000583577 TGS1Q96RS0 853 aaKnown RBP11.21□□□□□ -0.61
MKS1-212ENST00000583577 ZKSCAN3Q9BRR0 538 aa11.21□□□□□ -0.61
MKS1-212ENST00000583577 IRF2BPLQ9H1B7 796 aa11.21□□□□□ -0.61
MKS1-212ENST00000583577 TTC12Q9H892 705 aaPredicted RBP11.21□□□□□ -0.61
MKS1-212ENST00000583577 TLR9Q9NR96 1032 aa11.21□□□□□ -0.61
MKS1-212ENST00000583577 TRMT13Q9NUP7 481 aaKnown RBP11.21□□□□□ -0.61
MKS1-212ENST00000583577 TRPC6Q9Y210 931 aa11.21□□□□□ -0.61
MKS1-212ENST00000583577 NLRC5Q86WI3 1866 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms