RNA–Protein interactions for RNA: ENST00000583340.1

SUPT6H-208, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-208ENST00000583340 FAM126BQ8IXS8 530 aa9.74□□□□□ -0.85
SUPT6H-208ENST00000583340 TMEM199Q8N511 208 aa9.74□□□□□ -0.85
SUPT6H-208ENST00000583340 C7orf31Q8N865 590 aa9.74□□□□□ -0.85
SUPT6H-208ENST00000583340 GDF15Q99988 308 aa9.74□□□□□ -0.85
SUPT6H-208ENST00000583340 JADE2Q9NQC1 790 aa9.74□□□□□ -0.85
SUPT6H-208ENST00000583340 FOXD4L1Q9NU39 408 aa9.74□□□□□ -0.85
SUPT6H-208ENST00000583340 TPCN1Q9ULQ1 816 aa9.74□□□□□ -0.85
SUPT6H-208ENST00000583340 LIMCH1Q9UPQ0 1083 aa9.74□□□□□ -0.85
SUPT6H-208ENST00000583340 UBIAD1Q9Y5Z9 338 aa9.74□□□□□ -0.85
SUPT6H-208ENST00000583340 DNAH12Q6ZR08 3092 aa9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 F2P00734 622 aa9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 TIMP1P01033 207 aa9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 GNAT1P11488 350 aa9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 HOXD8P13378 290 aaPredicted RBP9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 CLK2P49760 499 aaKnown RBP9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 PSEN2P49810 448 aa9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 PSMC6P62333 389 aa9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 IRX5P78411 483 aaPredicted RBP9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 FPGSQ05932 587 aa9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 SCRN1Q12765 414 aa9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 BFSP2Q13515 415 aa9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 MFSD10Q14728 455 aa9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 NBPF20Q3BBV1 942 aa9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 TMEM63BQ5T3F8 832 aa9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 TYW1BQ6NUM6 668 aa9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 CYFIP1Q7L576 1253 aa9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 SESTD1Q86VW0 696 aa9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 TDHQ8IZJ6 230 aa9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 GTF3C6Q969F1 213 aa9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 MXRA8Q9BRK3 442 aa9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 LARP6Q9BRS8 491 aaKnown RBP9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 MTIF3Q9H2K0 278 aaKnown RBP9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 HIPK3Q9H422 1215 aa9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 JPH1Q9HDC5 661 aaPredicted RBP9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 VPS54Q9P1Q0 977 aa9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 ORC3Q9UBD5 711 aaPredicted RBP9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 TBX21Q9UL17 535 aa9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 PCDHA4Q9UN74 947 aa9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 SCN10AQ9Y5Y9 1956 aa9.73□□□□□ -0.85
SUPT6H-208ENST00000583340 TRIM43BA6NCK2 446 aa9.72□□□□□ -0.85
SUPT6H-208ENST00000583340 PARNO95453 639 aaKnown RBP9.72□□□□□ -0.85
SUPT6H-208ENST00000583340 CD4P01730 458 aa9.72□□□□□ -0.85
SUPT6H-208ENST00000583340 CYP3A4P08684 503 aa9.72□□□□□ -0.85
SUPT6H-208ENST00000583340 ITGB5P18084 799 aa9.72□□□□□ -0.85
SUPT6H-208ENST00000583340 USP11P51784 963 aa9.72□□□□□ -0.85
SUPT6H-208ENST00000583340 KIAA0753Q2KHM9 967 aa9.72□□□□□ -0.85
SUPT6H-208ENST00000583340 SKOR2Q2VWA4 1001 aaPredicted RBP9.72□□□□□ -0.85
SUPT6H-208ENST00000583340 HSDL1Q3SXM5 330 aa9.72□□□□□ -0.85
SUPT6H-208ENST00000583340 MFSD5Q6N075 450 aa9.72□□□□□ -0.85
SUPT6H-208ENST00000583340 CLEC17AQ6ZS10 378 aa9.72□□□□□ -0.85
SUPT6H-208ENST00000583340 KRT25Q7Z3Z0 450 aa9.72□□□□□ -0.85
SUPT6H-208ENST00000583340 RPUSD2Q8IZ73 545 aaKnown RBP9.72□□□□□ -0.85
SUPT6H-208ENST00000583340 BLIDQ8IZY5 108 aa9.72□□□□□ -0.85
SUPT6H-208ENST00000583340 RETREG2Q8NC44 543 aa9.72□□□□□ -0.85
SUPT6H-208ENST00000583340 DAGLBQ8NCG7 672 aa9.72□□□□□ -0.85
SUPT6H-208ENST00000583340 CAGE1Q8TC20 777 aa9.72□□□□□ -0.85
SUPT6H-208ENST00000583340 SEPT1Q8WYJ6 367 aa9.72□□□□□ -0.85
SUPT6H-208ENST00000583340 BADQ92934 168 aa9.72□□□□□ -0.85
SUPT6H-208ENST00000583340 TRIM43Q96BQ3 446 aaPredicted RBP9.72□□□□□ -0.85
SUPT6H-208ENST00000583340 NAP1L4Q99733 375 aaKnown RBP9.72□□□□□ -0.85
SUPT6H-208ENST00000583340 AZI2Q9H6S1 392 aa9.72□□□□□ -0.85
SUPT6H-208ENST00000583340 KCNH7Q9NS40 1196 aa9.72□□□□□ -0.85
SUPT6H-208ENST00000583340 SLC9A2Q9UBY0 812 aa9.72□□□□□ -0.85
SUPT6H-208ENST00000583340 KIF3AQ9Y496 699 aa9.72□□□□□ -0.85
SUPT6H-208ENST00000583340 NFASCO94856 1347 aa9.72□□□□□ -0.85
SUPT6H-208ENST00000583340 CCDC194A0A1B0GVG4 234 aa9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 H3BRB1 525 aa9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 MEIS1O00470 390 aa9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 PITPNM1O00562 1244 aa9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 SORBS3O60504 671 aa9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 B4GALT4O60513 344 aa9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 LGALS2P05162 132 aa9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 RPLP2P05387 115 aaKnown RBP9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 PFKMP08237 780 aa9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 ZNF286BP0CG31 522 aa9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 KCNA2P16389 499 aa9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 PTGS1P23219 599 aa9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 RFC2P35250 354 aa9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 HMGN5P82970 282 aaKnown RBP9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 SP2Q02086 613 aa9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 SP4Q02446 784 aa9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 SEMA3FQ13275 785 aa9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 SAFBQ15424 915 aaKnown RBP eCLIP9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 PTGISQ16647 500 aa9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 PSRC1Q6PGN9 363 aaPredicted RBP9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 SH3RF1Q7Z6J0 888 aa9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 PLA2G4DQ86XP0 818 aa9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 ZFP91Q96JP5 570 aaPredicted RBP9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 GPR20Q99678 358 aa9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 LLPHQ9BRT6 129 aaKnown RBP9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 ALG1Q9BT22 464 aa9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 PRO3102Q9H379 93 aa9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 SMARCAD1Q9H4L7 1026 aa9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 TUT1Q9H6E5 874 aaKnown RBP9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 TBC1D22BQ9NU19 505 aa9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 TMEM260Q9NX78 707 aa9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 MYH7BA7E2Y1 1941 aa9.71□□□□□ -0.86
SUPT6H-208ENST00000583340 C17orf102A2RUQ5 167 aa9.7□□□□□ -0.86
SUPT6H-208ENST00000583340 PPFIA3O75145 1194 aa9.7□□□□□ -0.86
SUPT6H-208ENST00000583340 CIITAP33076 1130 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms