RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 TRIM48Q8IWZ4 208 aa6.36□□□□□ -1.39
COPS3-217ENST00000583160 RBM12BQ8IXT5 1001 aaKnown RBP6.36□□□□□ -1.39
COPS3-217ENST00000583160 CLEC4DQ8WXI8 215 aa6.36□□□□□ -1.39
COPS3-217ENST00000583160 CDC6Q99741 560 aa6.36□□□□□ -1.39
COPS3-217ENST00000583160 BDH2Q9BUT1 245 aa6.36□□□□□ -1.39
COPS3-217ENST00000583160 SIRPGQ9P1W8 387 aa6.36□□□□□ -1.39
COPS3-217ENST00000583160 ASXL2Q76L83 1435 aa6.35□□□□□ -1.39
COPS3-217ENST00000583160 ADCY3O60266 1144 aa6.35□□□□□ -1.39
COPS3-217ENST00000583160 SOD2P04179 222 aa6.35□□□□□ -1.39
COPS3-217ENST00000583160 CNR2P34972 360 aa6.35□□□□□ -1.39
COPS3-217ENST00000583160 GRIN1Q05586 938 aa6.35□□□□□ -1.39
COPS3-217ENST00000583160 SSRP1Q08945 709 aaKnown RBP6.35□□□□□ -1.39
COPS3-217ENST00000583160 SPIRE1Q08AE8 756 aa6.35□□□□□ -1.39
COPS3-217ENST00000583160 SCUBE1Q8IWY4 988 aa6.35□□□□□ -1.39
COPS3-217ENST00000583160 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.35□□□□□ -1.39
COPS3-217ENST00000583160 ZSWIM3Q96MP5 696 aa6.35□□□□□ -1.39
COPS3-217ENST00000583160 HIRIP3Q9BW71 556 aaPredicted RBP6.35□□□□□ -1.39
COPS3-217ENST00000583160 WASF3Q9UPY6 502 aa6.35□□□□□ -1.39
COPS3-217ENST00000583160 TRAF6Q9Y4K3 522 aa6.35□□□□□ -1.39
COPS3-217ENST00000583160 TRBV23-1A0A0A0MS06 115 aa6.34□□□□□ -1.39
COPS3-217ENST00000583160 NKRFO15226 690 aaKnown RBP eCLIP6.34□□□□□ -1.39
COPS3-217ENST00000583160 GNAT1P11488 350 aa6.34□□□□□ -1.39
COPS3-217ENST00000583160 IL13P35225 146 aa6.34□□□□□ -1.39
COPS3-217ENST00000583160 KIAA2012Q0VF49 1180 aa6.34□□□□□ -1.39
COPS3-217ENST00000583160 FAM26FQ5R3K3 315 aa6.34□□□□□ -1.39
COPS3-217ENST00000583160 PRAMEF18Q5VWM3 479 aa6.34□□□□□ -1.39
COPS3-217ENST00000583160 TMC5Q6UXY8 1006 aa6.34□□□□□ -1.39
COPS3-217ENST00000583160 ZBTB38Q8NAP3 1195 aaPredicted RBP6.34□□□□□ -1.39
COPS3-217ENST00000583160 TXNDC5Q8NBS9 432 aaKnown RBP6.34□□□□□ -1.39
COPS3-217ENST00000583160 CLIC6Q96NY7 704 aa6.34□□□□□ -1.39
COPS3-217ENST00000583160 IPO9Q96P70 1041 aaKnown RBP6.34□□□□□ -1.39
COPS3-217ENST00000583160 TMEM209Q96SK2 561 aa6.34□□□□□ -1.39
COPS3-217ENST00000583160 IPPKQ9H8X2 491 aa6.34□□□□□ -1.39
COPS3-217ENST00000583160 HSPBP1Q9NZL4 362 aa6.34□□□□□ -1.39
COPS3-217ENST00000583160 MROH6A6NGR9 719 aa6.33□□□□□ -1.4
COPS3-217ENST00000583160 FAM47E-STBD1D6RA91 191 aa6.33□□□□□ -1.4
COPS3-217ENST00000583160 DIAPH1O60610 1272 aaKnown RBP6.33□□□□□ -1.4
COPS3-217ENST00000583160 LTFP02788 710 aa6.33□□□□□ -1.4
COPS3-217ENST00000583160 ZNF28P17035 718 aa6.33□□□□□ -1.4
COPS3-217ENST00000583160 RBL2Q08999 1139 aa6.33□□□□□ -1.4
COPS3-217ENST00000583160 TUSC3Q13454 348 aa6.33□□□□□ -1.4
COPS3-217ENST00000583160 FAM209AQ5JX71 171 aa6.33□□□□□ -1.4
COPS3-217ENST00000583160 FOXB2Q5VYV0 432 aa6.33□□□□□ -1.4
COPS3-217ENST00000583160 TTLL11Q8NHH1 800 aa6.33□□□□□ -1.4
COPS3-217ENST00000583160 UHMK1Q8TAS1 419 aaKnown RBP6.33□□□□□ -1.4
COPS3-217ENST00000583160 ALG1Q9BT22 464 aa6.33□□□□□ -1.4
COPS3-217ENST00000583160 RBPJLQ9UBG7 517 aa6.33□□□□□ -1.4
COPS3-217ENST00000583160 CROTQ9UKG9 612 aa6.33□□□□□ -1.4
COPS3-217ENST00000583160 NUB1Q9Y5A7 615 aa6.33□□□□□ -1.4
COPS3-217ENST00000583160 CYP7B1O75881 506 aa6.32□□□□□ -1.4
COPS3-217ENST00000583160 MLLT6P55198 1093 aaPredicted RBP6.32□□□□□ -1.4
COPS3-217ENST00000583160 HABP4Q5JVS0 413 aaKnown RBP6.32□□□□□ -1.4
COPS3-217ENST00000583160 PRRT2Q7Z6L0 340 aaPredicted RBP6.32□□□□□ -1.4
COPS3-217ENST00000583160 FAM124AQ86V42 546 aa6.32□□□□□ -1.4
COPS3-217ENST00000583160 PROSER1Q86XN7 944 aa6.32□□□□□ -1.4
COPS3-217ENST00000583160 PTPRN2Q92932 1015 aa6.32□□□□□ -1.4
COPS3-217ENST00000583160 ARMC5Q96C12 935 aa6.32□□□□□ -1.4
COPS3-217ENST00000583160 LCORQ96JN0 433 aaPredicted RBP6.32□□□□□ -1.4
COPS3-217ENST00000583160 L2HGDHQ9H9P8 463 aa6.32□□□□□ -1.4
COPS3-217ENST00000583160 DSEQ9UL01 958 aa6.32□□□□□ -1.4
COPS3-217ENST00000583160 KDM2BQ8NHM5 1336 aa6.31□□□□□ -1.4
COPS3-217ENST00000583160 AQP7O14520 342 aa6.31□□□□□ -1.4
COPS3-217ENST00000583160 CYP1A1P04798 512 aaPredicted RBP6.31□□□□□ -1.4
COPS3-217ENST00000583160 FAM153BP0C7A2 387 aa6.31□□□□□ -1.4
COPS3-217ENST00000583160 FAHP16930 419 aa6.31□□□□□ -1.4
COPS3-217ENST00000583160 SUMO1P63165 101 aaKnown RBP6.31□□□□□ -1.4
COPS3-217ENST00000583160 SERINC3Q13530 473 aa6.31□□□□□ -1.4
COPS3-217ENST00000583160 PAN2Q504Q3 1202 aaKnown RBP6.31□□□□□ -1.4
COPS3-217ENST00000583160 MAMDC2Q7Z304 686 aaPredicted RBP6.31□□□□□ -1.4
COPS3-217ENST00000583160 LGI4Q8N135 537 aa6.31□□□□□ -1.4
COPS3-217ENST00000583160 WRNIP1Q96S55 665 aa6.31□□□□□ -1.4
COPS3-217ENST00000583160 INVSQ9Y283 1065 aa6.31□□□□□ -1.4
COPS3-217ENST00000583160 TELO2Q9Y4R8 837 aa6.31□□□□□ -1.4
COPS3-217ENST00000583160 FAM221BA6H8Z2 402 aa6.3□□□□□ -1.4
COPS3-217ENST00000583160 C9orf118A6NHY6 69 aa6.3□□□□□ -1.4
COPS3-217ENST00000583160 C6orf222P0C671 652 aaPredicted RBP6.3□□□□□ -1.4
COPS3-217ENST00000583160 RASA3Q14644 834 aa6.3□□□□□ -1.4
COPS3-217ENST00000583160 VASNQ6EMK4 673 aa6.3□□□□□ -1.4
COPS3-217ENST00000583160 BORAQ6PGQ7 559 aa6.3□□□□□ -1.4
COPS3-217ENST00000583160 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.3□□□□□ -1.4
COPS3-217ENST00000583160 MTDHQ86UE4 582 aaKnown RBP6.3□□□□□ -1.4
COPS3-217ENST00000583160 ZCCHC14Q8WYQ9 949 aaKnown RBP6.3□□□□□ -1.4
COPS3-217ENST00000583160 EXOC2Q96KP1 924 aa6.3□□□□□ -1.4
COPS3-217ENST00000583160 DEPDC7Q96QD5 511 aa6.3□□□□□ -1.4
COPS3-217ENST00000583160 DHRS4Q9BTZ2 278 aa6.3□□□□□ -1.4
COPS3-217ENST00000583160 PDGFDQ9GZP0 370 aaPredicted RBP6.3□□□□□ -1.4
COPS3-217ENST00000583160 TMEM168Q9H0V1 697 aa6.3□□□□□ -1.4
COPS3-217ENST00000583160 CKMP06732 381 aa6.29□□□□□ -1.4
COPS3-217ENST00000583160 EPHA5P54756 1037 aa6.29□□□□□ -1.4
COPS3-217ENST00000583160 PAK1Q13153 545 aa6.29□□□□□ -1.4
COPS3-217ENST00000583160 PHF19Q5T6S3 580 aa6.29□□□□□ -1.4
COPS3-217ENST00000583160 TRMT10BQ6PF06 316 aaKnown RBP6.29□□□□□ -1.4
COPS3-217ENST00000583160 KCTD1Q719H9 257 aa6.29□□□□□ -1.4
COPS3-217ENST00000583160 LRP10Q7Z4F1 713 aa6.29□□□□□ -1.4
COPS3-217ENST00000583160 DTX3Q8N9I9 347 aa6.29□□□□□ -1.4
COPS3-217ENST00000583160 YTHDC1Q96MU7 727 aaKnown RBP6.29□□□□□ -1.4
COPS3-217ENST00000583160 KRTAP9-3Q9BYQ3 159 aa6.29□□□□□ -1.4
COPS3-217ENST00000583160 DLL4Q9NR61 685 aa6.29□□□□□ -1.4
COPS3-217ENST00000583160 SNTG2Q9NY99 539 aa6.29□□□□□ -1.4
COPS3-217ENST00000583160 PCDHA8Q9Y5H6 950 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms