RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 RAD9AQ99638 391 aa16.7■□□□□ 0.26
ITGB4-208ENST00000582629 MTA3Q9BTC8 594 aa16.7■□□□□ 0.26
ITGB4-208ENST00000582629 SPZ1Q9BXG8 430 aa16.7■□□□□ 0.26
ITGB4-208ENST00000582629 TUT1Q9H6E5 874 aaKnown RBP16.7■□□□□ 0.26
ITGB4-208ENST00000582629 LY9Q9HBG7 655 aa16.7■□□□□ 0.26
ITGB4-208ENST00000582629 COG5Q9UP83 839 aa16.7■□□□□ 0.26
ITGB4-208ENST00000582629 RSPH10B2B2RC85 870 aa16.69■□□□□ 0.26
ITGB4-208ENST00000582629 SPATA31C2B4DYI2 1134 aa16.69■□□□□ 0.26
ITGB4-208ENST00000582629 LPXNO60711 386 aa16.69■□□□□ 0.26
ITGB4-208ENST00000582629 RSPH10BP0C881 870 aa16.69■□□□□ 0.26
ITGB4-208ENST00000582629 BMP1P13497 986 aa16.69■□□□□ 0.26
ITGB4-208ENST00000582629 SMARCA1P28370 1054 aa16.69■□□□□ 0.26
ITGB4-208ENST00000582629 HOXC8P31273 242 aa16.69■□□□□ 0.26
ITGB4-208ENST00000582629 KIF5BP33176 963 aa16.69■□□□□ 0.26
ITGB4-208ENST00000582629 TFF2Q03403 129 aa16.69■□□□□ 0.26
ITGB4-208ENST00000582629 CASC1Q6TDU7 716 aa16.69■□□□□ 0.26
ITGB4-208ENST00000582629 SPRED2Q7Z698 418 aa16.69■□□□□ 0.26
ITGB4-208ENST00000582629 SMARCC2Q8TAQ2 1214 aa16.69■□□□□ 0.26
ITGB4-208ENST00000582629 ATP6V0A1Q93050 837 aa16.69■□□□□ 0.26
ITGB4-208ENST00000582629 LZTS2Q9BRK4 669 aa16.69■□□□□ 0.26
ITGB4-208ENST00000582629 USP26Q9BXU7 913 aa16.69■□□□□ 0.26
ITGB4-208ENST00000582629 SEC63Q9UGP8 760 aaKnown RBP16.69■□□□□ 0.26
ITGB4-208ENST00000582629 TRANK1O15050 2925 aa16.69■□□□□ 0.26
ITGB4-208ENST00000582629 KAT6AQ92794 2004 aa16.69■□□□□ 0.26
ITGB4-208ENST00000582629 SMIM10L2AP0DMW4 78 aa16.68■□□□□ 0.26
ITGB4-208ENST00000582629 SMIM10L2BP0DMW5 78 aa16.68■□□□□ 0.26
ITGB4-208ENST00000582629 GNAQP50148 359 aa16.68■□□□□ 0.26
ITGB4-208ENST00000582629 XRRA1Q6P2D8 792 aa16.68■□□□□ 0.26
ITGB4-208ENST00000582629 CYFIP1Q7L576 1253 aa16.68■□□□□ 0.26
ITGB4-208ENST00000582629 TGS1Q96RS0 853 aaKnown RBP16.68■□□□□ 0.26
ITGB4-208ENST00000582629 MYL10Q9BUA6 226 aa16.68■□□□□ 0.26
ITGB4-208ENST00000582629 BCAS3Q9H6U6 928 aa16.68■□□□□ 0.26
ITGB4-208ENST00000582629 RTEL1Q9NZ71 1219 aa16.68■□□□□ 0.26
ITGB4-208ENST00000582629 LMCD1Q9NZU5 365 aa16.68■□□□□ 0.26
ITGB4-208ENST00000582629 XIRP2A4UGR9 3374 aa16.67■□□□□ 0.26
ITGB4-208ENST00000582629 PIK3CDO00329 1044 aa16.67■□□□□ 0.26
ITGB4-208ENST00000582629 TREHO43280 583 aa16.67■□□□□ 0.26
ITGB4-208ENST00000582629 CAND2O75155 1236 aa16.67■□□□□ 0.26
ITGB4-208ENST00000582629 AMHP03971 560 aa16.67■□□□□ 0.26
ITGB4-208ENST00000582629 GNAT1P11488 350 aa16.67■□□□□ 0.26
ITGB4-208ENST00000582629 KCNQ1P51787 676 aa16.67■□□□□ 0.26
ITGB4-208ENST00000582629 ERVK-21P61565 698 aa16.67■□□□□ 0.26
ITGB4-208ENST00000582629 SEMA3FQ13275 785 aa16.67■□□□□ 0.26
ITGB4-208ENST00000582629 PLEKHG4Q58EX7 1191 aa16.67■□□□□ 0.26
ITGB4-208ENST00000582629 PCNX4Q63HM2 1172 aa16.67■□□□□ 0.26
ITGB4-208ENST00000582629 USP17L6PQ6QN14 398 aa16.67■□□□□ 0.26
ITGB4-208ENST00000582629 TMTC2Q8N394 836 aa16.67■□□□□ 0.26
ITGB4-208ENST00000582629 DBF4BQ8NFT6 615 aa16.67■□□□□ 0.26
ITGB4-208ENST00000582629 TMEM87BQ96K49 555 aa16.67■□□□□ 0.26
ITGB4-208ENST00000582629 GPR20Q99678 358 aa16.67■□□□□ 0.26
ITGB4-208ENST00000582629 SENP7Q9BQF6 1050 aa16.67■□□□□ 0.26
ITGB4-208ENST00000582629 RNPEPQ9H4A4 650 aa16.67■□□□□ 0.26
ITGB4-208ENST00000582629 ZNF215Q9UL58 517 aaPredicted RBP16.67■□□□□ 0.26
ITGB4-208ENST00000582629 REV3LO60673 3130 aa16.66■□□□□ 0.26
ITGB4-208ENST00000582629 LINC01553A4QN01 128 aa16.66■□□□□ 0.26
ITGB4-208ENST00000582629 SH2B2O14492 632 aaPredicted RBP16.66■□□□□ 0.26
ITGB4-208ENST00000582629 PRC1O43663 620 aa16.66■□□□□ 0.26
ITGB4-208ENST00000582629 MCM5P33992 734 aa16.66■□□□□ 0.26
ITGB4-208ENST00000582629 MKRN4PQ13434 485 aaPredicted RBP16.66■□□□□ 0.26
ITGB4-208ENST00000582629 FAM117BQ6P1L5 589 aa16.66■□□□□ 0.26
ITGB4-208ENST00000582629 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.66■□□□□ 0.26
ITGB4-208ENST00000582629 NFXL1Q6ZNB6 911 aa16.66■□□□□ 0.26
ITGB4-208ENST00000582629 NLRX1Q86UT6 975 aa16.66■□□□□ 0.26
ITGB4-208ENST00000582629 GIMAP8Q8ND71 665 aaPredicted RBP16.66■□□□□ 0.26
ITGB4-208ENST00000582629 GDPD5Q8WTR4 605 aa16.66■□□□□ 0.26
ITGB4-208ENST00000582629 HLA-CQ95604 372 aa16.66■□□□□ 0.26
ITGB4-208ENST00000582629 MTUS1Q9ULD2 1270 aa16.66■□□□□ 0.26
ITGB4-208ENST00000582629 INSL6Q9Y581 213 aa16.66■□□□□ 0.26
ITGB4-208ENST00000582629 CCDC69A6NI79 296 aa16.65■□□□□ 0.26
ITGB4-208ENST00000582629 MEIS2O14770 477 aa16.65■□□□□ 0.26
ITGB4-208ENST00000582629 PLEKHA8P1O95397 391 aa16.65■□□□□ 0.26
ITGB4-208ENST00000582629 IRX6P78412 446 aaPredicted RBP16.65■□□□□ 0.26
ITGB4-208ENST00000582629 MYOCDQ8IZQ8 938 aa16.65■□□□□ 0.26
ITGB4-208ENST00000582629 SEPT8Q92599 483 aa16.65■□□□□ 0.26
ITGB4-208ENST00000582629 NECAB3Q96P71 396 aaPredicted RBP16.65■□□□□ 0.26
ITGB4-208ENST00000582629 LSG1Q9H089 658 aaKnown RBP16.65■□□□□ 0.26
ITGB4-208ENST00000582629 SUGCTQ9HAC7 445 aa16.65■□□□□ 0.26
ITGB4-208ENST00000582629 BRWD1Q9NSI6 2320 aa16.64■□□□□ 0.25
ITGB4-208ENST00000582629 CTSHP09668 335 aa16.64■□□□□ 0.25
ITGB4-208ENST00000582629 CALM1P0DP23 149 aa16.64■□□□□ 0.25
ITGB4-208ENST00000582629 CALM2P0DP24 149 aa16.64■□□□□ 0.25
ITGB4-208ENST00000582629 CALM3P0DP25 149 aa16.64■□□□□ 0.25
ITGB4-208ENST00000582629 LIFRP42702 1097 aa16.64■□□□□ 0.25
ITGB4-208ENST00000582629 HTRA4P83105 476 aaPredicted RBP16.64■□□□□ 0.25
ITGB4-208ENST00000582629 UTP14CQ5TAP6 766 aaKnown RBP16.64■□□□□ 0.25
ITGB4-208ENST00000582629 TRIM50Q86XT4 487 aa16.64■□□□□ 0.25
ITGB4-208ENST00000582629 SRBD1Q8N5C6 995 aaKnown RBP16.64■□□□□ 0.25
ITGB4-208ENST00000582629 GPRASP2Q96D09 838 aa16.64■□□□□ 0.25
ITGB4-208ENST00000582629 CDHR1Q96JP9 859 aa16.64■□□□□ 0.25
ITGB4-208ENST00000582629 SETD4Q9NVD3 440 aa16.64■□□□□ 0.25
ITGB4-208ENST00000582629 SLC27A2O14975 620 aa16.63■□□□□ 0.25
ITGB4-208ENST00000582629 ARHGAP4P98171 946 aa16.63■□□□□ 0.25
ITGB4-208ENST00000582629 SP4Q02446 784 aa16.63■□□□□ 0.25
ITGB4-208ENST00000582629 SP7Q8TDD2 431 aaPredicted RBP16.63■□□□□ 0.25
ITGB4-208ENST00000582629 LMBR1Q8WVP7 490 aa16.63■□□□□ 0.25
ITGB4-208ENST00000582629 APBB2Q92870 758 aa16.63■□□□□ 0.25
ITGB4-208ENST00000582629 PSTPIP2Q9H939 334 aa16.63■□□□□ 0.25
ITGB4-208ENST00000582629 TELO2Q9Y4R8 837 aa16.63■□□□□ 0.25
ITGB4-208ENST00000582629 SLC12A7Q9Y666 1083 aa16.63■□□□□ 0.25
ITGB4-208ENST00000582629 RXRAP19793 462 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms