RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 CAGE1Q8TC20 777 aa11.18□□□□□ -0.62
TRAPPC8-211ENST00000582539 MBOAT7Q96N66 472 aa11.18□□□□□ -0.62
TRAPPC8-211ENST00000582539 DEFB129Q9H1M3 183 aa11.18□□□□□ -0.62
TRAPPC8-211ENST00000582539 PARVGQ9HBI0 331 aa11.18□□□□□ -0.62
TRAPPC8-211ENST00000582539 TYW1Q9NV66 732 aaKnown RBP11.18□□□□□ -0.62
TRAPPC8-211ENST00000582539 COG2Q14746 738 aa11.18□□□□□ -0.62
TRAPPC8-211ENST00000582539 CCDC181Q5TID7 509 aa11.18□□□□□ -0.62
TRAPPC8-211ENST00000582539 ZNF384Q8TF68 577 aa11.18□□□□□ -0.62
TRAPPC8-211ENST00000582539 CNOT7Q9UIV1 285 aaKnown RBP11.18□□□□□ -0.62
TRAPPC8-211ENST00000582539 hCG_1642624A0A1W2PR95 340 aa11.18□□□□□ -0.62
TRAPPC8-211ENST00000582539 CLRN2A0PK11 232 aa11.18□□□□□ -0.62
TRAPPC8-211ENST00000582539 ETF1P62495 437 aaKnown RBP11.18□□□□□ -0.62
TRAPPC8-211ENST00000582539 GBP6Q6ZN66 633 aa11.18□□□□□ -0.62
TRAPPC8-211ENST00000582539 SYCE1Q8N0S2 351 aa11.18□□□□□ -0.62
TRAPPC8-211ENST00000582539 NAP1L3Q99457 506 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC8-211ENST00000582539 TUBGCP2Q9BSJ2 902 aa11.18□□□□□ -0.62
TRAPPC8-211ENST00000582539 RTN4Q9NQC3 1192 aaKnown RBP11.18□□□□□ -0.62
TRAPPC8-211ENST00000582539 CXCL11O14625 94 aa11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 ATP8B1O43520 1251 aa11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 PSMC2P35998 433 aaKnown RBP11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 CXCL9Q07325 125 aa11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 USH1GQ495M9 461 aa11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 NOL9Q5SY16 702 aaKnown RBP11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 FAM83BQ5T0W9 1011 aa11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 PNMA8AQ86V59 439 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 LDHDQ86WU2 507 aa11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 MSANTD4Q8NCY6 345 aa11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 MTMR9Q96QG7 549 aa11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 XRCC5P13010 732 aaKnown RBP11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 AP3M2P53677 418 aa11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 RNF207Q6ZRF8 634 aa11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 CNOT6LQ96LI5 555 aaKnown RBP11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 C12orf42Q96LP6 360 aa11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 SELENOOQ9BVL4 669 aa11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 TEX13BQ9BXU2 312 aa11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 FERP16591 822 aa11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 KRT9P35527 623 aa11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 MAP3K9P80192 1104 aa11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 CDC42EP1Q00587 391 aa11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 MDM2Q00987 491 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 NEDD9Q14511 834 aa11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 E2F4Q16254 413 aa11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 MICALL2Q8IY33 904 aa11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 TCP11Q8WWU5 503 aa11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 MRPL44Q9H9J2 332 aaKnown RBP11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 DBR1Q9UK59 544 aaKnown RBP11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 KIAA1024Q9UPX6 916 aa11.17□□□□□ -0.62
TRAPPC8-211ENST00000582539 ALAS1P13196 640 aa11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 STRN3Q13033 797 aa11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 ZNF746Q6NUN9 644 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 CEP128Q6ZU80 1094 aa11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 FAM178BQ8IXR5 827 aa11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 PRMT6Q96LA8 375 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 ATF5Q9Y2D1 282 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 NCBP1Q09161 790 aaKnown RBP11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 NFIL3Q16649 462 aa11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 PCNX4Q63HM2 1172 aa11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 SLFN12LQ6IEE8 588 aa11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 DNERQ8NFT8 737 aa11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 TRIM58Q8NG06 486 aa11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 IMPG2Q9BZV3 1241 aa11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 AZI2Q9H6S1 392 aa11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 DDX4Q9NQI0 724 aaKnown RBP11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 LRRC10BA6NIK2 292 aa11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 BPIFB4P59827 614 aa11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 GNG11P61952 73 aa11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 PSMC5P62195 406 aa11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 ASIC2Q16515 512 aa11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 SFMBT2Q5VUG0 894 aa11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 CDKAL1Q5VV42 579 aa11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 GOLGA1Q92805 767 aa11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 NAPGQ99747 312 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 MXRA8Q9BRK3 442 aa11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 PPP1R9AQ9ULJ8 1098 aa11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 MFAP3LO75121 409 aa11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 LDHAP00338 332 aaKnown RBP11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 RPLP2P05387 115 aaKnown RBP11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 SNX16P57768 344 aa11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 PPP2R5CQ13362 524 aa11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 TFDP1Q14186 410 aa11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 SPECC1Q5M775 1068 aa11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 USP50Q70EL3 339 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 EMILIN3Q9NT22 766 aa11.16□□□□□ -0.62
TRAPPC8-211ENST00000582539 SHTN1A0MZ66 631 aa11.15□□□□□ -0.62
TRAPPC8-211ENST00000582539 GMPSP49915 693 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC8-211ENST00000582539 NAP1L1P55209 391 aaKnown RBP11.15□□□□□ -0.62
TRAPPC8-211ENST00000582539 POTEDQ86YR6 584 aa11.15□□□□□ -0.62
TRAPPC8-211ENST00000582539 CNPY4Q8N129 248 aa11.15□□□□□ -0.62
TRAPPC8-211ENST00000582539 MYCT1Q8N699 235 aa11.15□□□□□ -0.62
TRAPPC8-211ENST00000582539 SYT2Q8N9I0 419 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC8-211ENST00000582539 PROCA1Q8NCQ7 364 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC8-211ENST00000582539 ERGIC2Q96RQ1 377 aa11.15□□□□□ -0.62
TRAPPC8-211ENST00000582539 GMLQ99445 158 aa11.15□□□□□ -0.62
TRAPPC8-211ENST00000582539 MAPK13O15264 365 aa11.15□□□□□ -0.62
TRAPPC8-211ENST00000582539 ZNF18P17022 549 aa11.15□□□□□ -0.62
TRAPPC8-211ENST00000582539 MAP3K10Q02779 954 aa11.15□□□□□ -0.62
TRAPPC8-211ENST00000582539 NR1I3Q14994 352 aa11.15□□□□□ -0.62
TRAPPC8-211ENST00000582539 TDRD12Q587J7 1177 aaKnown RBP11.15□□□□□ -0.62
TRAPPC8-211ENST00000582539 HSP90B2PQ58FF3 399 aa11.15□□□□□ -0.62
TRAPPC8-211ENST00000582539 SAMD1Q6SPF0 538 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms