RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 NEDD9Q14511 834 aa18.67■□□□□ 0.58
RNF43-206ENST00000582293 KAT2BQ92831 832 aa18.67■□□□□ 0.58
RNF43-206ENST00000582293 CDHR1Q96JP9 859 aa18.67■□□□□ 0.58
RNF43-206ENST00000582293 SPATA33Q96N06 139 aa18.67■□□□□ 0.58
RNF43-206ENST00000582293 UIMC1Q96RL1 719 aa18.67■□□□□ 0.58
RNF43-206ENST00000582293 GPR20Q99678 358 aa18.67■□□□□ 0.58
RNF43-206ENST00000582293 SLC37A4O43826 429 aa18.66■□□□□ 0.58
RNF43-206ENST00000582293 PSMC6P62333 389 aa18.66■□□□□ 0.58
RNF43-206ENST00000582293 PRR16Q569H4 304 aa18.66■□□□□ 0.58
RNF43-206ENST00000582293 MLXIPQ9HAP2 919 aa18.66■□□□□ 0.58
RNF43-206ENST00000582293 STARD7Q9NQZ5 370 aa18.66■□□□□ 0.58
RNF43-206ENST00000582293 SMC3Q9UQE7 1217 aa18.66■□□□□ 0.58
RNF43-206ENST00000582293 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.66■□□□□ 0.58
RNF43-206ENST00000582293 NFASCO94856 1347 aa18.66■□□□□ 0.58
RNF43-206ENST00000582293 ELP1O95163 1332 aa18.66■□□□□ 0.58
RNF43-206ENST00000582293 SCN10AQ9Y5Y9 1956 aa18.66■□□□□ 0.58
RNF43-206ENST00000582293 MSH4O15457 936 aa18.65■□□□□ 0.58
RNF43-206ENST00000582293 MYL3P08590 195 aa18.65■□□□□ 0.58
RNF43-206ENST00000582293 CDK7P50613 346 aa18.65■□□□□ 0.58
RNF43-206ENST00000582293 Q4G0T1 1027 aa18.65■□□□□ 0.58
RNF43-206ENST00000582293 C1orf53Q5VUE5 145 aa18.65■□□□□ 0.58
RNF43-206ENST00000582293 MOXD1Q6UVY6 613 aa18.65■□□□□ 0.58
RNF43-206ENST00000582293 NEK8Q86SG6 692 aa18.65■□□□□ 0.58
RNF43-206ENST00000582293 SLC43A3Q8NBI5 491 aa18.65■□□□□ 0.58
RNF43-206ENST00000582293 PPP1R13LQ8WUF5 828 aa18.65■□□□□ 0.58
RNF43-206ENST00000582293 GJA10Q969M2 543 aa18.65■□□□□ 0.58
RNF43-206ENST00000582293 INTS4Q96HW7 963 aaKnown RBP18.65■□□□□ 0.58
RNF43-206ENST00000582293 GLT1D1Q96MS3 346 aa18.65■□□□□ 0.58
RNF43-206ENST00000582293 POLR3EQ9NVU0 708 aa18.65■□□□□ 0.58
RNF43-206ENST00000582293 GSTTP1A0A1W2PQM5 241 aa18.64■□□□□ 0.57
RNF43-206ENST00000582293 ZEB2O60315 1214 aa18.64■□□□□ 0.57
RNF43-206ENST00000582293 CCNE2O96020 404 aa18.64■□□□□ 0.57
RNF43-206ENST00000582293 SETQ01105 290 aaPredicted RBP18.64■□□□□ 0.57
RNF43-206ENST00000582293 LETM2Q2VYF4 491 aa18.64■□□□□ 0.57
RNF43-206ENST00000582293 TRIM60Q495X7 471 aa18.64■□□□□ 0.57
RNF43-206ENST00000582293 C16orf70Q9BSU1 422 aa18.64■□□□□ 0.57
RNF43-206ENST00000582293 MTG1Q9BT17 334 aaPredicted RBP18.64■□□□□ 0.57
RNF43-206ENST00000582293 FOXP1Q9H334 677 aaPredicted RBP18.64■□□□□ 0.57
RNF43-206ENST00000582293 BRMS1Q9HCU9 246 aa18.64■□□□□ 0.57
RNF43-206ENST00000582293 FOXD4L1Q9NU39 408 aa18.64■□□□□ 0.57
RNF43-206ENST00000582293 PCDH10Q9P2E7 1040 aa18.64■□□□□ 0.57
RNF43-206ENST00000582293 IPO5O00410 1097 aaKnown RBP18.63■□□□□ 0.57
RNF43-206ENST00000582293 PPFIA4O75335 1185 aa18.63■□□□□ 0.57
RNF43-206ENST00000582293 CABYRO75952 493 aa18.63■□□□□ 0.57
RNF43-206ENST00000582293 F2P00734 622 aa18.63■□□□□ 0.57
RNF43-206ENST00000582293 ZNF286BP0CG31 522 aa18.63■□□□□ 0.57
RNF43-206ENST00000582293 U2AF2P26368 475 aaKnown RBP eCLIP18.63■□□□□ 0.57
RNF43-206ENST00000582293 RTP1P59025 263 aa18.63■□□□□ 0.57
RNF43-206ENST00000582293 SP4Q02446 784 aa18.63■□□□□ 0.57
RNF43-206ENST00000582293 DGKDQ16760 1214 aa18.63■□□□□ 0.57
RNF43-206ENST00000582293 PPP4R3AQ6IN85 833 aa18.63■□□□□ 0.57
RNF43-206ENST00000582293 GIMAP8Q8ND71 665 aaPredicted RBP18.63■□□□□ 0.57
RNF43-206ENST00000582293 ETNPPLQ8TBG4 499 aa18.63■□□□□ 0.57
RNF43-206ENST00000582293 HTATIP2Q9BUP3 242 aa18.63■□□□□ 0.57
RNF43-206ENST00000582293 A0A0U1RQG5 324 aaPredicted RBP18.62■□□□□ 0.57
RNF43-206ENST00000582293 ARVCFO00192 962 aa18.62■□□□□ 0.57
RNF43-206ENST00000582293 HAS3O00219 553 aa18.62■□□□□ 0.57
RNF43-206ENST00000582293 KPNA6O60684 536 aa18.62■□□□□ 0.57
RNF43-206ENST00000582293 LGALS2P05162 132 aa18.62■□□□□ 0.57
RNF43-206ENST00000582293 ITGA7Q13683 1181 aa18.62■□□□□ 0.57
RNF43-206ENST00000582293 SAFBQ15424 915 aaKnown RBP eCLIP18.62■□□□□ 0.57
RNF43-206ENST00000582293 BRDTQ58F21 947 aaPredicted RBP18.62■□□□□ 0.57
RNF43-206ENST00000582293 TRIM50Q86XT4 487 aa18.62■□□□□ 0.57
RNF43-206ENST00000582293 HSCBQ8IWL3 235 aa18.62■□□□□ 0.57
RNF43-206ENST00000582293 SLC5A5Q92911 643 aa18.62■□□□□ 0.57
RNF43-206ENST00000582293 PCYT2Q99447 389 aa18.62■□□□□ 0.57
RNF43-206ENST00000582293 ZNF577Q9BSK1 485 aa18.62■□□□□ 0.57
RNF43-206ENST00000582293 JPH1Q9HDC5 661 aaPredicted RBP18.62■□□□□ 0.57
RNF43-206ENST00000582293 DDX39AO00148 427 aaKnown RBP18.61■□□□□ 0.57
RNF43-206ENST00000582293 B3GNT9Q6UX72 402 aa18.61■□□□□ 0.57
RNF43-206ENST00000582293 ANKRD33Q7Z3H0 272 aa18.61■□□□□ 0.57
RNF43-206ENST00000582293 NOSTRINQ8IVI9 506 aa18.61■□□□□ 0.57
RNF43-206ENST00000582293 KCNMB3Q9NPA1 279 aa18.61■□□□□ 0.57
RNF43-206ENST00000582293 SLC9A2Q9UBY0 812 aa18.61■□□□□ 0.57
RNF43-206ENST00000582293 DDX25Q9UHL0 483 aaKnown RBP18.61■□□□□ 0.57
RNF43-206ENST00000582293 NOP56O00567 594 aaKnown RBP18.6■□□□□ 0.57
RNF43-206ENST00000582293 CCNT1O60563 726 aaKnown RBP18.6■□□□□ 0.57
RNF43-206ENST00000582293 PSMD10O75832 226 aa18.6■□□□□ 0.57
RNF43-206ENST00000582293 ATG7O95352 703 aa18.6■□□□□ 0.57
RNF43-206ENST00000582293 GCFC2P16383 781 aaKnown RBP18.6■□□□□ 0.57
RNF43-206ENST00000582293 TCF7P36402 384 aaPredicted RBP18.6■□□□□ 0.57
RNF43-206ENST00000582293 ACTR2P61160 394 aa18.6■□□□□ 0.57
RNF43-206ENST00000582293 TLE2Q04725 743 aa18.6■□□□□ 0.57
RNF43-206ENST00000582293 HIC1Q14526 733 aa18.6■□□□□ 0.57
RNF43-206ENST00000582293 NBPF20Q3BBV1 942 aa18.6■□□□□ 0.57
RNF43-206ENST00000582293 LARP1BQ659C4 914 aaKnown RBP18.6■□□□□ 0.57
RNF43-206ENST00000582293 POTEDQ86YR6 584 aa18.6■□□□□ 0.57
RNF43-206ENST00000582293 FAM126BQ8IXS8 530 aa18.6■□□□□ 0.57
RNF43-206ENST00000582293 C7orf61Q8IZ16 206 aa18.6■□□□□ 0.57
RNF43-206ENST00000582293 SEPT1Q8WYJ6 367 aa18.6■□□□□ 0.57
RNF43-206ENST00000582293 DPF3Q92784 378 aa18.6■□□□□ 0.57
RNF43-206ENST00000582293 HAS1Q92839 578 aa18.6■□□□□ 0.57
RNF43-206ENST00000582293 SDF4Q9BRK5 362 aa18.6■□□□□ 0.57
RNF43-206ENST00000582293 ATP11BQ9Y2G3 1177 aa18.6■□□□□ 0.57
RNF43-206ENST00000582293 KIF3AQ9Y496 699 aa18.6■□□□□ 0.57
RNF43-206ENST00000582293 IGKV6D-21A0A0A0MT36 114 aa18.59■□□□□ 0.57
RNF43-206ENST00000582293 LGR5O75473 907 aa18.59■□□□□ 0.57
RNF43-206ENST00000582293 CD4P01730 458 aa18.59■□□□□ 0.57
RNF43-206ENST00000582293 PSEN2P49810 448 aa18.59■□□□□ 0.57
RNF43-206ENST00000582293 TOB1P50616 345 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms