RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 IGFLR1Q9H665 355 aa10.29□□□□□ -0.76
CDK5RAP3-224ENST00000582275 EPB41L4AQ9HCS5 686 aaPredicted RBP10.29□□□□□ -0.76
CDK5RAP3-224ENST00000582275 ALG13Q9NP73 1137 aaKnown RBP10.29□□□□□ -0.76
CDK5RAP3-224ENST00000582275 PRR23AA6NEV1 266 aa10.28□□□□□ -0.76
CDK5RAP3-224ENST00000582275 H0Y858 1186 aa10.28□□□□□ -0.76
CDK5RAP3-224ENST00000582275 GRM6O15303 877 aa10.28□□□□□ -0.76
CDK5RAP3-224ENST00000582275 RNF113AO15541 343 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP3-224ENST00000582275 KDM4AO75164 1064 aa10.28□□□□□ -0.76
CDK5RAP3-224ENST00000582275 PPFIA4O75335 1185 aa10.28□□□□□ -0.76
CDK5RAP3-224ENST00000582275 CHGBP05060 677 aa10.28□□□□□ -0.76
CDK5RAP3-224ENST00000582275 ATF7P17544 494 aaPredicted RBP10.28□□□□□ -0.76
CDK5RAP3-224ENST00000582275 NBL1P41271 181 aa10.28□□□□□ -0.76
CDK5RAP3-224ENST00000582275 VCPP55072 806 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP3-224ENST00000582275 PPARAQ07869 468 aa10.28□□□□□ -0.76
CDK5RAP3-224ENST00000582275 STXBP2Q15833 593 aa10.28□□□□□ -0.76
CDK5RAP3-224ENST00000582275 LY6KQ17RY6 165 aa10.28□□□□□ -0.76
CDK5RAP3-224ENST00000582275 CHST3Q7LGC8 479 aa10.28□□□□□ -0.76
CDK5RAP3-224ENST00000582275 EFHBQ8N7U6 833 aa10.28□□□□□ -0.76
CDK5RAP3-224ENST00000582275 KBTBD3Q8NAB2 608 aa10.28□□□□□ -0.76
CDK5RAP3-224ENST00000582275 CLP1Q92989 425 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP3-224ENST00000582275 OSBP2Q969R2 916 aa10.28□□□□□ -0.76
CDK5RAP3-224ENST00000582275 CHMP4CQ96CF2 233 aa10.28□□□□□ -0.76
CDK5RAP3-224ENST00000582275 ASIC4Q96FT7 647 aa10.28□□□□□ -0.76
CDK5RAP3-224ENST00000582275 NAPBQ9H115 298 aa10.28□□□□□ -0.76
CDK5RAP3-224ENST00000582275 BCL11AQ9H165 835 aa10.28□□□□□ -0.76
CDK5RAP3-224ENST00000582275 TLR9Q9NR96 1032 aa10.28□□□□□ -0.76
CDK5RAP3-224ENST00000582275 CACNA1BQ00975 2339 aa10.28□□□□□ -0.76
CDK5RAP3-224ENST00000582275 GNAT1P11488 350 aa10.27□□□□□ -0.77
CDK5RAP3-224ENST00000582275 HOXD8P13378 290 aaPredicted RBP10.27□□□□□ -0.77
CDK5RAP3-224ENST00000582275 SLC16A2P36021 539 aa10.27□□□□□ -0.77
CDK5RAP3-224ENST00000582275 RRP1P56182 461 aaKnown RBP10.27□□□□□ -0.77
CDK5RAP3-224ENST00000582275 PTPN21Q16825 1174 aa10.27□□□□□ -0.77
CDK5RAP3-224ENST00000582275 KCNV1Q6PIU1 500 aa10.27□□□□□ -0.77
CDK5RAP3-224ENST00000582275 ASCL5Q7RTU5 278 aa10.27□□□□□ -0.77
CDK5RAP3-224ENST00000582275 MCF2L2Q86YR7 1114 aa10.27□□□□□ -0.77
CDK5RAP3-224ENST00000582275 ATP6V0A1Q93050 837 aa10.27□□□□□ -0.77
CDK5RAP3-224ENST00000582275 P2RX5Q93086 422 aa10.27□□□□□ -0.77
CDK5RAP3-224ENST00000582275 WNT8BQ93098 351 aa10.27□□□□□ -0.77
CDK5RAP3-224ENST00000582275 NKD2Q969F2 451 aaPredicted RBP10.27□□□□□ -0.77
CDK5RAP3-224ENST00000582275 GPATCH3Q96I76 525 aa10.27□□□□□ -0.77
CDK5RAP3-224ENST00000582275 RIPOR3Q96MK2 946 aa10.27□□□□□ -0.77
CDK5RAP3-224ENST00000582275 MTMR7Q9Y216 660 aa10.27□□□□□ -0.77
CDK5RAP3-224ENST00000582275 ADGRA3Q8IWK6 1321 aa10.27□□□□□ -0.77
CDK5RAP3-224ENST00000582275 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.26□□□□□ -0.77
CDK5RAP3-224ENST00000582275 C17orf102A2RUQ5 167 aa10.26□□□□□ -0.77
CDK5RAP3-224ENST00000582275 EIF3JO75822 258 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP3-224ENST00000582275 ZNF286BP0CG31 522 aa10.26□□□□□ -0.77
CDK5RAP3-224ENST00000582275 TOP1P11387 765 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP3-224ENST00000582275 NOVP48745 357 aa10.26□□□□□ -0.77
CDK5RAP3-224ENST00000582275 TTBK2Q6IQ55 1244 aa10.26□□□□□ -0.77
CDK5RAP3-224ENST00000582275 ZBTB33Q86T24 672 aa10.26□□□□□ -0.77
CDK5RAP3-224ENST00000582275 INCENPQ9NQS7 918 aa10.26□□□□□ -0.77
CDK5RAP3-224ENST00000582275 ECHDC1Q9NTX5 307 aa10.26□□□□□ -0.77
CDK5RAP3-224ENST00000582275 DDX41Q9UJV9 622 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP3-224ENST00000582275 USP15Q9Y4E8 981 aaPredicted RBP10.26□□□□□ -0.77
CDK5RAP3-224ENST00000582275 MRVI1Q9Y6F6 885 aa10.26□□□□□ -0.77
CDK5RAP3-224ENST00000582275 PLXNA3P51805 1871 aa10.25□□□□□ -0.77
CDK5RAP3-224ENST00000582275 USP34Q70CQ2 3546 aa10.25□□□□□ -0.77
CDK5RAP3-224ENST00000582275 LINC01565O15544 149 aa10.25□□□□□ -0.77
CDK5RAP3-224ENST00000582275 RANBP6O60518 1105 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-224ENST00000582275 SRGAP2BP0DMP2 458 aa10.25□□□□□ -0.77
CDK5RAP3-224ENST00000582275 MS4A1P11836 297 aa10.25□□□□□ -0.77
CDK5RAP3-224ENST00000582275 RLBP1P12271 317 aa10.25□□□□□ -0.77
CDK5RAP3-224ENST00000582275 GTF2F1P35269 517 aaKnown RBP eCLIP10.25□□□□□ -0.77
CDK5RAP3-224ENST00000582275 ZNF200P98182 395 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-224ENST00000582275 BTG3Q14201 252 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-224ENST00000582275 UBALD2Q8IYN6 164 aa10.25□□□□□ -0.77
CDK5RAP3-224ENST00000582275 RPGRIP1Q96KN7 1286 aa10.25□□□□□ -0.77
CDK5RAP3-224ENST00000582275 RMDN3Q96TC7 470 aa10.25□□□□□ -0.77
CDK5RAP3-224ENST00000582275 CHMP4BQ9H444 224 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-224ENST00000582275 GPCPD1Q9NPB8 672 aa10.25□□□□□ -0.77
CDK5RAP3-224ENST00000582275 IL17RBQ9NRM6 502 aa10.25□□□□□ -0.77
CDK5RAP3-224ENST00000582275 CLEC1BQ9P126 229 aa10.25□□□□□ -0.77
CDK5RAP3-224ENST00000582275 PLAGL2Q9UPG8 496 aa10.25□□□□□ -0.77
CDK5RAP3-224ENST00000582275 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.25□□□□□ -0.77
CDK5RAP3-224ENST00000582275 LINC00271P0C7V0 271 aa10.24□□□□□ -0.77
CDK5RAP3-224ENST00000582275 HOXC8P31273 242 aa10.24□□□□□ -0.77
CDK5RAP3-224ENST00000582275 FAM26DQ5JW98 314 aa10.24□□□□□ -0.77
CDK5RAP3-224ENST00000582275 GPATCH4Q5T3I0 446 aaKnown RBP10.24□□□□□ -0.77
CDK5RAP3-224ENST00000582275 ARHGEF16Q5VV41 709 aa10.24□□□□□ -0.77
CDK5RAP3-224ENST00000582275 ADSSL1Q8N142 457 aa10.24□□□□□ -0.77
CDK5RAP3-224ENST00000582275 SYTL5Q8TDW5 730 aaPredicted RBP10.24□□□□□ -0.77
CDK5RAP3-224ENST00000582275 BBXQ8WY36 941 aaPredicted RBP10.24□□□□□ -0.77
CDK5RAP3-224ENST00000582275 SPATA33Q96N06 139 aa10.24□□□□□ -0.77
CDK5RAP3-224ENST00000582275 CDCA3Q99618 268 aaPredicted RBP10.24□□□□□ -0.77
CDK5RAP3-224ENST00000582275 LRRCC1Q9C099 1032 aa10.24□□□□□ -0.77
CDK5RAP3-224ENST00000582275 KIAA1217Q5T5P2 1943 aa10.24□□□□□ -0.77
CDK5RAP3-224ENST00000582275 ABCB11O95342 1321 aa10.24□□□□□ -0.77
CDK5RAP3-224ENST00000582275 FRMPD2Q68DX3 1309 aaPredicted RBP10.24□□□□□ -0.77
CDK5RAP3-224ENST00000582275 TRIOO75962 3097 aa10.24□□□□□ -0.77
CDK5RAP3-224ENST00000582275 GVINP1Q7Z2Y8 2422 aa10.24□□□□□ -0.77
CDK5RAP3-224ENST00000582275 H3BRB1 525 aa10.23□□□□□ -0.77
CDK5RAP3-224ENST00000582275 M0R2C6 588 aa10.23□□□□□ -0.77
CDK5RAP3-224ENST00000582275 ORC4O43929 436 aa10.23□□□□□ -0.77
CDK5RAP3-224ENST00000582275 NMT2O60551 498 aa10.23□□□□□ -0.77
CDK5RAP3-224ENST00000582275 TGFB3P10600 412 aa10.23□□□□□ -0.77
CDK5RAP3-224ENST00000582275 PDHBP11177 359 aa10.23□□□□□ -0.77
CDK5RAP3-224ENST00000582275 NRIP1P48552 1158 aa10.23□□□□□ -0.77
CDK5RAP3-224ENST00000582275 ZNF543Q08ER8 600 aa10.23□□□□□ -0.77
CDK5RAP3-224ENST00000582275 USH1GQ495M9 461 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms