RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 SYNGAP1Q96PV0 1343 aa14.2□□□□□ -0.14
SRSF1-204ENST00000581979 GCOM1H8Y6P7 765 aaPredicted RBP14.19□□□□□ -0.14
SRSF1-204ENST00000581979 PIK3CDO00329 1044 aa14.19□□□□□ -0.14
SRSF1-204ENST00000581979 TDP2O95551 362 aa14.19□□□□□ -0.14
SRSF1-204ENST00000581979 POLR2MP0CAP2 368 aa14.19□□□□□ -0.14
SRSF1-204ENST00000581979 SYN1P17600 705 aa14.19□□□□□ -0.14
SRSF1-204ENST00000581979 HOXA13P31271 388 aaPredicted RBP14.19□□□□□ -0.14
SRSF1-204ENST00000581979 LONP1P36776 959 aaKnown RBP14.19□□□□□ -0.14
SRSF1-204ENST00000581979 PRPHP41219 470 aa14.19□□□□□ -0.14
SRSF1-204ENST00000581979 MRE11P49959 708 aa14.19□□□□□ -0.14
SRSF1-204ENST00000581979 IL17AQ16552 155 aa14.19□□□□□ -0.14
SRSF1-204ENST00000581979 POTEDQ86YR6 584 aa14.19□□□□□ -0.14
SRSF1-204ENST00000581979 PNMA2Q9UL42 364 aa14.19□□□□□ -0.14
SRSF1-204ENST00000581979 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.18□□□□□ -0.14
SRSF1-204ENST00000581979 KBTBD13C9JR72 458 aa14.18□□□□□ -0.14
SRSF1-204ENST00000581979 POLR2DO15514 142 aaKnown RBP14.18□□□□□ -0.14
SRSF1-204ENST00000581979 ALAS1P13196 640 aa14.18□□□□□ -0.14
SRSF1-204ENST00000581979 GCFC2P16383 781 aaKnown RBP14.18□□□□□ -0.14
SRSF1-204ENST00000581979 MAGEA10P43363 369 aaPredicted RBP14.18□□□□□ -0.14
SRSF1-204ENST00000581979 USP11P51784 963 aa14.18□□□□□ -0.14
SRSF1-204ENST00000581979 LRRC41Q15345 812 aa14.18□□□□□ -0.14
SRSF1-204ENST00000581979 CALCRLQ16602 461 aa14.18□□□□□ -0.14
SRSF1-204ENST00000581979 PPP4R3AQ6IN85 833 aa14.18□□□□□ -0.14
SRSF1-204ENST00000581979 USP49Q70CQ1 688 aa14.18□□□□□ -0.14
SRSF1-204ENST00000581979 FCHSD1Q86WN1 690 aa14.18□□□□□ -0.14
SRSF1-204ENST00000581979 PDILTQ8N807 584 aa14.18□□□□□ -0.14
SRSF1-204ENST00000581979 CNNM3Q8NE01 707 aa14.18□□□□□ -0.14
SRSF1-204ENST00000581979 EPSTI1Q96J88 318 aa14.18□□□□□ -0.14
SRSF1-204ENST00000581979 FUCA2Q9BTY2 467 aa14.18□□□□□ -0.14
SRSF1-204ENST00000581979 DDX25Q9UHL0 483 aaKnown RBP14.18□□□□□ -0.14
SRSF1-204ENST00000581979 SLC37A4O43826 429 aa14.18□□□□□ -0.14
SRSF1-204ENST00000581979 SNAI1O95863 264 aaPredicted RBP14.18□□□□□ -0.14
SRSF1-204ENST00000581979 RARBP10826 455 aa14.18□□□□□ -0.14
SRSF1-204ENST00000581979 AKR1A1P14550 325 aa14.18□□□□□ -0.14
SRSF1-204ENST00000581979 TXLNAP40222 546 aa14.18□□□□□ -0.14
SRSF1-204ENST00000581979 LONRF3Q496Y0 759 aa14.18□□□□□ -0.14
SRSF1-204ENST00000581979 KRBA2Q6ZNG9 492 aa14.18□□□□□ -0.14
SRSF1-204ENST00000581979 ANKRD35Q8N283 1001 aa14.18□□□□□ -0.14
SRSF1-204ENST00000581979 TBC1D5Q92609 795 aa14.18□□□□□ -0.14
SRSF1-204ENST00000581979 FGD4Q96M96 766 aa14.18□□□□□ -0.14
SRSF1-204ENST00000581979 PANK2Q9BZ23 570 aa14.18□□□□□ -0.14
SRSF1-204ENST00000581979 RBSNQ9H1K0 784 aa14.18□□□□□ -0.14
SRSF1-204ENST00000581979 EHMT1Q9H9B1 1298 aa14.18□□□□□ -0.14
SRSF1-204ENST00000581979 EDIL3O43854 480 aa14.17□□□□□ -0.14
SRSF1-204ENST00000581979 MARCH6O60337 910 aa14.17□□□□□ -0.14
SRSF1-204ENST00000581979 ATN1P54259 1190 aaPredicted RBP14.17□□□□□ -0.14
SRSF1-204ENST00000581979 ARHGAP4P98171 946 aa14.17□□□□□ -0.14
SRSF1-204ENST00000581979 TYRO3Q06418 890 aa14.17□□□□□ -0.14
SRSF1-204ENST00000581979 SNX17Q15036 470 aa14.17□□□□□ -0.14
SRSF1-204ENST00000581979 TMEM266Q2M3C6 531 aa14.17□□□□□ -0.14
SRSF1-204ENST00000581979 TKFCQ3LXA3 575 aa14.17□□□□□ -0.14
SRSF1-204ENST00000581979 SLC39A5Q6ZMH5 540 aa14.17□□□□□ -0.14
SRSF1-204ENST00000581979 MCF2L2Q86YR7 1114 aa14.17□□□□□ -0.14
SRSF1-204ENST00000581979 ACAD9Q9H845 621 aa14.17□□□□□ -0.14
SRSF1-204ENST00000581979 XPNPEP3Q9NQH7 507 aa14.17□□□□□ -0.14
SRSF1-204ENST00000581979 SERTAD1Q9UHV2 236 aa14.17□□□□□ -0.14
SRSF1-204ENST00000581979 HOOK1Q9UJC3 728 aaKnown RBP14.17□□□□□ -0.14
SRSF1-204ENST00000581979 SREBF1P36956 1147 aa14.16□□□□□ -0.14
SRSF1-204ENST00000581979 TXKP42681 527 aa14.16□□□□□ -0.14
SRSF1-204ENST00000581979 C1orf53Q5VUE5 145 aa14.16□□□□□ -0.14
SRSF1-204ENST00000581979 DHX58Q96C10 678 aa14.16□□□□□ -0.14
SRSF1-204ENST00000581979 CCDC34Q96HJ3 373 aa14.16□□□□□ -0.14
SRSF1-204ENST00000581979 PYM1Q9BRP8 204 aaKnown RBP14.16□□□□□ -0.14
SRSF1-204ENST00000581979 HOMER2Q9NSB8 354 aa14.16□□□□□ -0.14
SRSF1-204ENST00000581979 PHF24Q9UPV7 400 aa14.16□□□□□ -0.14
SRSF1-204ENST00000581979 ADCYAP1R1P41586 468 aa14.15□□□□□ -0.14
SRSF1-204ENST00000581979 TECP42680 631 aa14.15□□□□□ -0.14
SRSF1-204ENST00000581979 RTP1P59025 263 aa14.15□□□□□ -0.14
SRSF1-204ENST00000581979 ZRSR1Q15695 479 aaKnown RBP14.15□□□□□ -0.14
SRSF1-204ENST00000581979 MOXD1Q6UVY6 613 aa14.15□□□□□ -0.14
SRSF1-204ENST00000581979 RNF180Q86T96 592 aa14.15□□□□□ -0.14
SRSF1-204ENST00000581979 CEP57L1Q8IYX8 460 aa14.15□□□□□ -0.14
SRSF1-204ENST00000581979 FAM133AQ8N9E0 248 aa14.15□□□□□ -0.14
SRSF1-204ENST00000581979 RNF214Q8ND24 703 aa14.15□□□□□ -0.14
SRSF1-204ENST00000581979 RASSF8Q8NHQ8 419 aa14.15□□□□□ -0.14
SRSF1-204ENST00000581979 ERCC4Q92889 916 aaPredicted RBP14.15□□□□□ -0.14
SRSF1-204ENST00000581979 AK8Q96MA6 479 aa14.15□□□□□ -0.14
SRSF1-204ENST00000581979 MTMR9Q96QG7 549 aa14.15□□□□□ -0.14
SRSF1-204ENST00000581979 RNF146Q9NTX7 359 aa14.15□□□□□ -0.14
SRSF1-204ENST00000581979 KIAA1468Q9P260 1216 aa14.15□□□□□ -0.14
SRSF1-204ENST00000581979 FAM184BQ9ULE4 1060 aa14.15□□□□□ -0.14
SRSF1-204ENST00000581979 NFIBO00712 420 aa14.15□□□□□ -0.14
SRSF1-204ENST00000581979 ADAMTS4O75173 837 aa14.15□□□□□ -0.14
SRSF1-204ENST00000581979 PGK1P00558 417 aa14.15□□□□□ -0.14
SRSF1-204ENST00000581979 ZNF76P36508 570 aa14.15□□□□□ -0.14
SRSF1-204ENST00000581979 HSD17B4P51659 736 aa14.15□□□□□ -0.14
SRSF1-204ENST00000581979 KANK3Q6NY19 840 aa14.15□□□□□ -0.14
SRSF1-204ENST00000581979 ELOA2Q8IYF1 753 aaPredicted RBP14.15□□□□□ -0.14
SRSF1-204ENST00000581979 CLEC4DQ8WXI8 215 aa14.15□□□□□ -0.14
SRSF1-204ENST00000581979 TRERF1Q96PN7 1200 aa14.15□□□□□ -0.14
SRSF1-204ENST00000581979 RAB34Q9BZG1 259 aa14.15□□□□□ -0.14
SRSF1-204ENST00000581979 ABHD16BQ9H3Z7 469 aa14.15□□□□□ -0.14
SRSF1-204ENST00000581979 A1CFQ9NQ94 594 aaKnown RBP14.15□□□□□ -0.14
SRSF1-204ENST00000581979 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.15□□□□□ -0.14
SRSF1-204ENST00000581979 USP25Q9UHP3 1055 aa14.15□□□□□ -0.14
SRSF1-204ENST00000581979 CYP3A7-CYP3A51PA0A087WV96 503 aa14.14□□□□□ -0.15
SRSF1-204ENST00000581979 A0A087X0B3 334 aa14.14□□□□□ -0.15
SRSF1-204ENST00000581979 SOX1O00570 391 aaPredicted RBP14.14□□□□□ -0.15
SRSF1-204ENST00000581979 MYCNP04198 464 aaPredicted RBP14.14□□□□□ -0.15
SRSF1-204ENST00000581979 CYP3A7P24462 503 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms